Chromosome Mutations: Variation in Number and Arrangement Karyotypes Karyotypes are typically prepared using Giemsa staining to reveal G bands (rich in AT base pairs) Chromosome mutations 1. Aneuploidy 2. Polyploidy 3. Chromosome rearrangements Aneuploidy Aneuploidy - change in the number of individual chromosomes Chromosomes may be lost during mitosis or meiosis Nondisjunction in meiosis or mitosis Types of aneuploidy 1. Nullisomy - missing both copies of a homologous pair 2. Monosomy - missing one copy of a homologous pair 3. Trisomy - having one extra copy of a chromosome 4. Tetrasomy - having two extra copies of a chromosome Aneuploidy in humans Aneuploidy in humans usually leads to spontaneous abortion Only ~2% of all fetuses with a chromosome defect survive to birth Sex-chromosome aneuploidy o Probably more tolerated because of X inactivation and the fact that there are so few genes on the Y chromosome Autosome aneuploidy o Much less common than sex-chromosome aneuploidy Trisomy 21 - may only contain ~300 genes o ~92% of individuals with Down syndrome have primary Down syndrome o ~75% of the nondisjunction events are maternal in origin (usually at anaphase I) Other autosomal aneuploids Edward syndrome - extra 18 Patau syndrome - extra 13 Polyploidy Polyploidy is common in plants, rare in animals Autopolyploidy All sets are from the same species Can occur due to errors in meiosis or mitosis An autotriploid will always demonstrate unbalanced gametes after meiosis Therefore, most triploids do not produce viable offspring Allopolyploidy Arises from the hybridization of two species Interestingly, in plants, the hybrid is often viable Sometimes, the hybrid is actually more vigorous than either parent Chromosome rearrangements Deletions Duplications Inversions Translocations Deletions Loss of a chromosomal segment There can be different causes For heterozygotes, tetrad formation in prophase I can look pretty weird The consequences of the deletion depend on the location and the extent of the deletion - primarily which genes are lost o Loss of the centromere will prevent proper chromosome segregation o Most deletions are homozygous lethal o However, even heterozygotes may exhibit multiple defects o Imbalance of gene products o Recessive alleles may be expressed if the wild-type allele is lost pseudodominance o For some genes, there must be two copies for proper function o If one copy is not sufficient - haploinsufficient gene o Loss of function with haploinsufficient genes is dominant A deletion of a small portion at the terminus of chromosome 5 causes Cri du Chat Chromosome rearrangements Duplications o Tandem duplications - The duplicated region is adjacent to the original segment o Displaced duplication - The duplicated region is located away from the original segment o Reverse duplication - The duplicated region is inverted relative to the original segment Tandem duplications are usually the result of unequal crossing over o Chromosome duplications can show some interesting phenotypes o Having extra copies of genes may upset the careful balance required for proper development o On the other hand, having extra copies of genes may also remove the constraints on maintaining functional copies of essential genes This may allow the evolution of genes Inversions Paracentric inversions do not include the centromere Pericentric inversions do include the centromere Effects o Sometimes there is no effect o Sometimes an inversion may interrupt a gene o Other times, expression of genes can be altered - position effect Inversions can lead to interesting results during meiosis Translocations Exchange of DNA between non-homologous chromosomes There are issues during meiosis leading to non-viable gametes In a Robertsonian translocation, the breaks occur at the ends of the short arms o The resulting longer chromosome is usually stable but the smaller chromosome is not Effects o Can interrupt a gene o Position effects We can track translocations throughout evolutionary history Some characteristic types of translocations can lead to abnormal chromosome numbers o ~4% of individuals with Down syndrome have 45 chromosomes with an extra copy of a portion of chromosome 21 o Familial Down syndrome because it has a tendency to run in families o Usually this is the result of a Robertsonian translocation o Individuals with this translocation (translocation carriers) do not have Down syndrome because they have the long arms of both chromosomes o They do have an increased chance of producing children with Down syndrome o The most common translocation is between chromosomes 14 and 21 Fragile sites Some chromosomes develop fragile sites - constrictions or gaps o In fragile-X syndrome, this is due to an increased number of CGG trinucleotide repeats o Other fragile sites do not show repeated sequences Mosaicism If nondisjunction occurs in mitosis early in a developing individual, this can lead to mosaicism o Turner syndrome - ~50% show variable expressivity for Turner syndrome o They are mosaics of 45,X/46,XX and the severity depends on the time of the nondisjunction and where the 45,X cells are located Things can get really strange in Drosophila o Like XX/XO mosaics - gynandromorphs o There can be extreme cases