Research Associate/Data Analyst

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IMPERIAL COLLEGE LONDON

JOB DESCRIPTION

Job Title:

Division:

Department:

Location:

Research Associate/Data Analyst

Division of Infectious Diseases, (National Centre for

Infection Prevention and Management (CIPM) and School of Public Health, Department of Primary Care (PCPH))

Medicine

Hammersmith Campus and St Mary’s Campus (with travel between Imperial College sites required)

Job Family/Level:

Salary:

Duration:

Reporting to:

Academic and Research, Level B

£32,100 per annum

Full-time, fixed term until 1 July 2014

Prof Alison Holmes (Infectious Diseases; CIPM)

Dr Lydia Drumright (Infectious Diseases; CIPM)

Dr Paul Aylin (Department of Primary Care and Public

Health; CIPM)

Works closely with: Prof Peter Openshaw (National Heart and Lung Institute,

Principal Investigator)

Prof Deborah Ashby (Medical Statistics and Clinical Trials)

Dr Laura Garcia Alvarez, (MOSAIC Data Analyst, CIPM)

Other MOSAIC work package investigators, who may include: Prof. Andrew McMichael (Oxford); Prof. Maria

Zambon (Director of HPA Centre for Infections); Prof. Paul

Kellam (Wellcome Trust Sanger Institute, Head of

Virology), Prof. Bill Cookson ( Associate Head of the

National Heart and Lung Institute, Imperial); David Hume

(Roslin Institute, University of Edinburgh); Wendy Barclay

(Chair of Influenza Virology, Imperial); Prof Bill Carmen

(Edinburgh); Dr. David Heymann (Chairman of the Board

HPA); Prof. Stephen Holgate (Southampton); Prof. Mike

Levin (Director of the Wellcome Centre for Clinical Tropical

Medicine, Imperial).

The Context

Imperial College London and collaborating institutes have been awarded Wellcome

Trust funding to complete research to improve our understanding of the pathogenesis of influenza. We have assembled a team of 42 leading UK investigators in epidemiology, virology, immunology, cellular biology, bacteriology and statistics to maximize combined expertise for the intensive study of patients with influenza.

The collaborative network is conducting an integrated study of influenza virology,host

RNA transcriptome and cellular and humoral immune responses, and clinical outcome in influenza viral infection. All patients have been tested for levels of soluble mediators (cytokines and chemokines) in various body fluids and received extensive virology testing, including full-length genome sequencing of any isolated influenza, allowing for the cross correlation of extensive clinical and epidemiological data . These data will be linked to the study of the host genome and the bacterial and viral microbiota present in the respiratory tract as disease evolves. Use of hospitalised individuals from two waves of the pH1N1 epidemic will lead to a wealth of information and will lead to a unique overview of how influenza causes illness and what might be done to improve patient management.

The ultimate goal of this study is to provide critical information for improved patient management and care, development of new and effective treatments and to develop better vaccines that can be used in future outbreaks.

The post

This is an exciting opportunity for an individual with a PhD in an analytic field such as, but not limited to, epidemiology, statistics, systems biology or a related subject, who has already begun to establish their career in infectious disease research. The post-holder will support statistical analyses, for integrating data from different project components to provide more inclusive understanding of influenza pathogenesis. The post holder will also help to facilitate analytic quality and consistency across the whole programme. The post holder will also support management of the data cleaning house, data validation, and processing of data requests.

The main purpose of this post is to provide analytic and database support to work packages to intergrate data statistically that predict disease outcome. This may include making links between clinical, immunologic, transcriptomic and proteomic analyses during viral infection to determine how the viral genotype/phenotype and the host immune response determine clinical outcome; hypotheses testing about clinical and epidemiological features associated with severe disease including age, gender, pre-existing asthma or other chronic respiratory disease and pregnancy. It will also include working within the database team to ensure data quality and accuracy across the entire study.

The individual appointed, with other members of the analytic team (Drs. Lydia

Drumright, Laura Garcia-Alvarez, and Prof. Deborah Ashby), will provide the lynchpin that brings large and complex datasets together to support analysis across the whole programme. The successful applicant will focus on analyses of data, the design of innovative methodologies and approaches, the maintenance of databases, and data quality and accuracy. There is also plenty of scope for additional original research within this data-rich environment including opportunities to build on existing work at

Imperial College that is linking other NHS databases to improve surveillance and opportunities for developing a more permanent role within CIPM.

The post holder will be a member of both the National Centre for Infection Prevention and Management (CIPM) (Directed by Professors Alison Holmes and Jon Friedland) within the Division of Infectious Diseases and Immunity (Head, Professor Jon

Friedland) and the Department of Primary Care and Public Health (Head, Professor

Azeem Majeed) in the School of Public Health (Head, Professor Elio Riboli within the

Faculty of Medicine at Imperial College London. The appointee will be based at the

Hammersmith Hospital in White City. The successful candidate will be expected to play a full and active role in the academic life of the Departments.

This is a full-time post until 31 July 2104, subject to probationary review after six months. The post holder may share an office with other post doctoral researchers, and can expect to frequently travel between Imperial Campus.

Main Duties :

Analysis and Research

To develop high quality statistical analysis plans and support hypothesis generation for the MOSAIC dataset

To provide early preliminary analysis reports to shape further investigations

To present results of study findings in publications and conference proceedings

To collaborate with other researchers to share and analyse data within the databases

To identify complementary databases and analyses for expanding the capacity of

MOSAIC

To assist in the maintenance of databases

To conduct data validation and entry of correct data where necessary

To prepare datasets for study investigators

To participate in other associated research projects as appropriate

To participate in the academic life of the project/Centre/Department through involvement in meetings, seminars and other research activities.

Development, writing, and submission of future grant applications either collaboratively or independently

Provide expert advice on statistical modelling and analysis as required

Provide teaching support for MSc and doctoral students in statistical and epidemiological analyses

Collaboration and Liaison

To liaise frequently with the MOSAIC Statistical Analysis Team and work package members, providing progress reports and information as required

To work closely with other Centres including the Centre for Respiratory Infection and the Centre for Infection Prevention and Management

To work closely with collaborators in Liverpool and Nottingham particularly in relation to the use of FLU-CIN, FLU-WATCH Data and with other DoH FLU-CIN

Centres

To liaise with other related bodies in relation to the project, representing the

Centre at relevant internal and external meetings

Attend regular meetings and teleconferences to discuss study progress

Staff Management

To take responsibility for training and development of self and others working on epidemiological and statistical analyses within MOSAIC and CIPM

Development and management of a database for the management of clinical specimens

To contribute to the overall strategy on data storage and access to data

To support maintenance and backup of databases

To support data quality control

To champion the acquisition and linkage of different datasets.

To observe and comply with all College policies and regulations, including the key policies and procedures on Confidentiality, Conflict of Interest, Data

Protection, Equal Opportunities, Financial Regulations, Health and Safety,

Imperial Expectations (for new leaders, managers and supervisors),

Information Technology, Private Engagements and Register of Interests, and

Smoking.

To undertake specific safety responsibilities relevant to individual roles, as set out on the College Website Health and Safety Structure and Responsibilities

page (http://www3.imperial.ac.uk/safety/policies/organisationandarrangements)

Job descriptions cannot be exhaustive and the post-holder may be required to undertake other duties, which are broadly in line with the above key

responsibilities.

Imperial College is committed to equality of opportunity and to eliminating discrimination. All employees are expected to adhere to the principles set out in its Equal Opportunities in Employment Policy, Promoting Race Equality

Policy and all other relevant guidance/practice frameworks.

PERSON SPECIFICATION

QUALIFICATIONS

Essential

PhD or equivalent in a quantitative science such as, Epidemiology, Statistics,

Systems Biology, or a related subject, and experience conducting advanced statistical analyses

EXPERIENCE AND KNOWLEDGE

Essential

Research experience in infectious diseases, immunology, or a related field

Competence in STATA, R, SAS or S-plus

Experience cleaning and analysing different types of data

Expertise in conducting and interpreting a wide range of analytic procedures

Experience in the management and analysis of complex data

Excellent analytic skills

Success in delivering research results as demonstrated through a track record of publications in peer-reviewed journals.

Demonstrable track record of independent research and a growing national reputation as demonstrated through papers or grants or an ability to transition to independence

Desirable

Record of successful application for research grants

Experience in developing statistical techniques

Database development or management experience

Knowledge of human immunology

Experience working in influenza research

Experience with Bayesian analysis methods

SKILLS

Essential

Ability to communicate with and organise a wide range of people in an appropriate manner

Ability to write peer-reviewed manuscripts and reports in a clear and concise manner

Excellent attention to detail

Excellent statistical skills

Proficiency in Microsoft Word, Access, Excel and Outlook

Ability to work constructively and effectively within a team

Ability to work independently and use initiative

Ability to prioritise a varied workload and work under pressure to meet deadlines while maintaining a high level of accuracy

Ability to adhere to research and ethics protocols and maintain study deadlines

Ability to use bibliographic/database software

Ability to analyse data in one or more of the following statistical packages: R,

STATA, S-Plus, SAS.

Flexible attitude toward working hours and ability to work to deadlines

Ability to communicate complex information clearly

Application Guidance

Please read the person specification carefully and describe, as part of your application, how much you feel you meet each of the criteria. If you need more space, please attach additional sheets to the application form.

The recruitment monitoring section of your application will be detached and will be used only for monitoring and audit purposes as a basis for supporting our commitment to Equal Opportunities.

An application form and full CV quoting reference number HM2013091 should be sent online via the Imperial College iRecruitment website.

Shortlisted candidates will be contacted as soon as possible after the closing date.

Thank you for your interest in this post. We look forward to receiving your application.

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