A workshop on biodiversity informatics for marine species taxonomic

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A workshop on biodiversity informatics for marine species taxonomic experts

20-21 st

June 2008 hosted by the Flanders Marine Institute (VLIZ), Ostend, Belgium.

Sponsored by MarBEF

We have made great progress with the World and European Registers of Marine Species, and related activities by using side-meetings at other events and email. To create more momentum we need to more closely involve and energise the people who should be involved. A face-to-face meeting between the editors and data management team is thus planned for 20-21 st June 2008 at VLIZ.

This workshop is for the taxonomic experts who validate marine species names and information in online databases. Their efforts are enabling the availability of authoritative quality controlled information on marine species names and associated information that contribute to

MarBEF, EDIT, PESI, WoRMS, GBIF, OBIS and Species 2000 Catalogue of Life.

The workshop outcomes will include (1) increased enthusiasm and know-how amongst taxonomic experts as to online publication processes and benefits; (2) deadlines for progress on WoRMS, interoperability and our initiatives; (3) Multi-author paper on known and knowable marine species started. It may also include side meetings of major-taxon editors on 19 th June 2008. Editors planning such meetings should contact Ward Appeltans.

Documents to be circulated:

1.

Taxonomy21 report from EDIT;

2.

Towards a management hierarchy;

3.

Comments from end-users and collaborators, including Atlas of Living Australia and ICES;

4.

How many marine species are known and unknown

5.

Discussion paper on WoRMS organisation, management, responsibilities, recommended citation style, and funding.

Persons attending:

Taxonomic editors

Angel Martin (Ostracoda), National Oceanography Centre, UK

Arvanitidis Christos (Polychaeta), Institute of Marine Biology and genetics, Hellenic Centre of Marine

Research (HCMR), Greece

Bailly Nicolas (Pisces), WorldFish Center, Philippines

Bamber Roger (Pycnogonida), The Natural History Museum, UK

Blachowiak-Samolyk Katarzyna (Ostracoda), Polish Academy of Sciences; Institute of Oceanology,

Poland

Bouchet, Philippe (Mollusca), Muséum National d'Histoire Naturelle, France

Boury-Esnault, Nicole (Porifera), Centre d'Océanologie de Marseille; Station Marine d'Endoume,

France

Boxshall Geoff (Copepoda), The Natural History Museum, UK

Buckland Clare, Sir Alister Hardy Foundation for Ocean Science, UK

Chancerel Thomas, Muséum National d'Histoire Naturelle, France

Costello Mark J. (Amphipoda), University of Auckland, New Zealand

Cribb Thomas (Trematoda), The University of Queensland, Australia

Davie Peter (Decapoda), Queensland University, Australia

De Broyer Claude (Chief Editor RAMS), Royal Belgian Institute of Natural Sciences, Belgium

Deprez Tim (Mysidacea, Nematoda), Universiteit Gent; Faculteit Wetenschappen; Vakgroep Biologie;

Afdeling Mariene Biologie, Belgium de Voogd Nicole (Porifera), Naturalis, The Netherlands

d’Udekem d’Acoz Cédric (Amphipoda), Royal Belgian Institute of Natural Sciences, Belgium

Emig Christian (Brachiopoda, Phoronida), BrachNet, France

Fauchald Kristian (Polychaeta), Smithsonian Institution/National Museum of Natural History, USA

Gittenberger Adriaan (Tunicata), National Museum of Natural History Naturalis, The Netherlands

Gofas Serge (Mollusca), Universidad de Málaga, Spain

Gordon Dennis (Bryozoa), National Institute of Water & Atmospheric Research (NIWA), New

Zealand

Hoeksema Bert (Scleractinia), National Museum of Natural History Naturalis, The Netherlands

Longshaw Matt (Myxozoa), The Centre for Environment, Fisheries and Aquaculture Science, UK

Macpherson, Enrique (Crustacea), Centro de Estudios Avanzados de Blanes (CSIC), Spain

Mapstone Gillian (Siphonophora), The Natural History Museum, UK

Rosenberg Gary (Mollusca), Academy of Natural Sciences of Philadelphia, USA

Segers Hendrik (Rotifera), Belgian Biodiversity Platform, Free University of Brussels, Belgium

Sterrer Wolfgang (Gnathostomulida), Bermuda Natural History Museum, Bermuda

Stöhr Sabine (Echinodermata), Swedish Museum of Natural History, Department of Invertebrate

Zoology, Sweden

Türkay Michael (Decapoda), Forschungsinstitut Senckenberg; Departement of Marine Zoology,

Germany van Soest Rob (Porifera), Zoological Museum of the University of Amsterdam, The Netherlands

Walter Chad (Copepoda), Smithsonian Institution, USA

Watling Les (Cumacea), University of Hawaii at Manao, USA

Data managers

Appeltans Ward, Flanders Marine Institute, Belgium

Decock Wim, Flanders Marine Institute, Belgium

Hernandez Francisco, Flanders Marine Institute, Belgium

Palomares Maria Lourdes (Deng), Fisheries Centre, University of British Columbia, Canada

Renaudier Sylvain, Belgian Biodiversity Platform, Free University of Brussels, Belgium

Vanden Berghe Edward, Rutgers University; Institute of Marine and Coastal Sciences, USA

Vandepitte Leen, Flanders Marine Institute, Belgium

Vanhoorne Bart, Flanders Marine Institute, Belgium

Other invitees

Connolly Niamh, European Science Foundation; Marine Board, Belgium

Mees Jan, Flanders Marine Institute, Belgium

Orrell Thomas, Integrated Taxonomic Information System & Catalogue of Life, USA

Patterson David, Encyclopedia of Life, Marine Biological Laboratory, USA

Pissierssens Peter, UNESCO; Intergovernmental Oceanographic Commission; IOC Project Office for

IODE, Belgium

Remsen David, Global Biodiversity Information Facility, Denmark

Roskov Yury, Species 2000 Secretariat; Plant Science Laboratories; The University of Reading, UK

Observers

Balian Estelle, Belgian Biodiversity Platform, Free University of Brussels, Belgium

Dencheva Kristina, Bulgarian Academy of Sciences; Institute of Oceanology, Bulgaria

Moncheva Snejana Bulgarian Academy of Sciences; Institute of Oceanology, Bulgaria

Panayotova Marina, Bulgarian Academy of Sciences; Institute of Oceanology, Bulgaria

Slabakova Natalia Bulgarian Academy of Sciences; Institute of Oceanology, Bulgaria

Stefanova Kremena, Bulgarian Academy of Sciences; Institute of Oceanology, Bulgaria

Agenda

INTRODUCTION

Session Chair: Geoff Boxshall

09:00-09:30 Welcome to VLIZ (Dr Jan Mees, Director)

Housekeeping, About VLIZ and its Data Centre

09:30-10:00 A vision for modern taxonomy using online databases as a service for users and taxonomists (EDIT future of taxonomy manifesto) (Mark Costello)

10:00-10:30 Challenges in quality control in online marine biodiversity information systems (Edward Vanden Berghe)

10:30-11:00 Refreshments

DATA MANAGEMENT

11:00-12:30 How WoRMS and ERMS databases and editing systems work (Ward

Appeltans and Bart Vanhoorne).

Discuss online editing, interactions with external resources, and potential developments. Review and make recommendations for standard vocabularies for species names (WoRMS+others), place names (IHO gazetteer), ecology and habitat terminology, species attributes, and online tools to facilitate these.

12:30-13:30 Lunch

USER NEEDS

Session Chair: Mark Costello

13:30-14:30 Addressing needs of end-users

14:30-15:00 Round table discussions on how to improve and develop WoRMS, ERMS etc.

15:00-15:30 Refreshments

15:30-16:00 Towards a classification of life for data management (Dennis Gordon)

16:00-17:00 Continue round table discussions

Reception with famous Belgian beers.

DAY 2

Session Chair: Philippe Bouchet

09:00-09:30 Review conclusions from Day 1.

09:30-10:30 (a) Filling gaps in Taxonomic Editors

(b) Linking to authoritative External Global Species Databases

Tanaidacea, Lophogastrida, Cestoda, Turbellaria, Hexacorallia, AlgaeBase, Mysida,

Nematoda, Enoplometopidae (Astacidea), Mammalia, Reptilia, Aves, others?

10:30-11:00 Refreshments

INVENTORING MARINE BIODIVERSITY

11:00-12:30 How many marine species are known and unknown (Mark Costello)

Discuss ‘known’ number of species per taxon, and ways to estimate number yet to be described. [Plan for joint multi-author publication of WoRMS editors and CoML deliverable on the number of known and knowable marine species ; Mark Costello review current status]

New marine species descriptions: what is actually being achieved?

(Philippe Bouchet and Thomas Chancerel)

12:30-13:30 Lunch

Session Chair: Ward Appeltans

13:30-15:00 WoRMS management issues a.

Organisation and management responsibilities. b.

Agree style of recommended citation. c.

Money matters – agree terms for call for proposals from Taxonomic

Editors to spend GBIF and Lounesbury funds to develop WoRMS content. d.

WoRMS Logo e.

Brochure and/or poster to advertise WoRMS at conferences

15:00-15:30 Refreshments

15:30-16:30 Summary of key conclusions and action items.

Any other business?

17:00 End of workshop

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