Aquatic Sciences Publications
2012
Scientific papers
Amorim, F. N., Cirano, M., Soares, I. D., Campos, E. J. D., Middleton, J. F. 2012. The
influence of large-scale circulation, transient and local processes on the seasonal
circulation of the Eastern Brazilian Shelf, 13°S. Continental Shelf Research, 32, 47-61.
Ansmann, I.C., Parra, G.J., Chilvers, B.L. and Lanyon, J.M. (2012). Dolphins restructure
social system after reduction of commercial fisheries. Animal Behaviour 84: 575-581.
Ansmann, I.C., Parra, G.J., Lanyon, J.M. and Seddon, J.M. (2012). Fine-scale genetic
population structure in a mobile marine mammal: inshore bottlenose dolphins in
Moreton Bay, Australia. Molecular Ecology 21, 4472-4485.
Baylis, A.M.M., Page, B., McKenzie, J. and Goldsworthy S.D. (2012). Individual
foraging site fidelity in lactating New Zealand fur seals: continental shelf versus oceanic
habitats. Marine Mammal Science. 28: 276-294.
Bryars, S., Rogers, P., Huveneers, C., Payne, N., Smith, I. and McDonald, B. (2012).
Small home range in southern Australia’s largest resident reef fish, the western blue
groper (Achoerodus gouldii): implications for adequacy of no-take marine protected
areas. Marine and Freshwater Research 63: 552–563.
Baumgartner, L. J., Bettanin, M., McPherson, J., Jones, M., Zampatti, B. and Beyer, K.
(2012) Influence of turbidity and passage rate on the efficiency of an infrared counter to
enumerate and measure riverine fish. Journal of Applied Ichthyology 28, 531-536.
Bowyer, J.N., Qin, J.G., Smullen, R.P., Stone, D.A.J., 2012. Replacement of fish oil by
poultry oil and canola oil in yellowtail kingfish (Seriola lalandi) at optimal and suboptimal
temperatures. Aquaculture, 356-357: 211-222.
Bowyer J.N., Qin J.G., Adams L.R., Thomson, M.J.S., Stone D.A.J., 2012. The
response of digestive enzyme activities and gut histology in yellowtail kingfish (Seriola
lalandi) to dietary fish oil substitution at different temperatures. Aquaculture 368, 19–28.
Bowyer, J.N., Qin, J.G., Stone, D.A.J., 2012. Protein, lipid and energy requirements of
cultured marine fish in cold, temperate and warm water: a review. Reviews in
Aquaculture 4: 1-23.
Bowyer, J.N., Rout-Pitt, N., Bain, P.A., Stone, D.A.J., Schuller, K.A., 2012. Dietary fish
oil replacement with canola oil up-regulates glutathione peroxidase 1 gene expression
in yellowtail kingfish (Seriola lalandi). Comparative Biochemistry and Physiology - Part
B 162: 100-106.
Bryars, S., Rogers, P., Huveneers, C., Payne, N., Smith, I. and McDonald, B. (2012).
Small home range in southern Australia’s largest resident reef fish, the western blue
groper (Achoerodus gouldii): implications for adequacy of no-take marine protected
areas. Marine and Freshwater Research 63: 552–563.
Chapperon C & Seuront L (2012) Temporal shifts in the motion behavior and habitat
use in an intertidal gastropod. Journal of the Marine Biological Association of the United
Kingdom. 93: 1025-1034.
Chick, R.C., Mayfield, S., Burch, P. Turich, S.N., McGarvey, R. (2012). Detecting
change in density and biomass of a benthic marine invertebrate following commercial
fishing. Fisheries Research: Vols 129–130. pp94–105.
Collins, G.M., Ball, A.S., Qin, J.G., Bowyer, J., Stone, D., 2012. Effect of alternative
lipids and temperature on growth factor gene expression in yellowtail kingfish (Seriola
lalandi). Aquaculture Research. DOI: 10.1111/are.12067.
Conallin, A. J, Smith, B. B, Thwaites, L.A, Walker, K. F and Gillanders, B. M. (2012)
Environmental Water Allocations in regulated lowland rivers may encourage offstream
movements and spawning by common carp, Cyprinus carpio: implications for wetland
rehabilitation. Marine and Freshwater Research, 63, 865–877.
Cribb N, Miller C & Seuront L (2012) Site fidelity and behaviour of spinner dolphins
(Stenella longirostris) in Moon Reef, Fiji Islands: implications for conservation. Journal
of the Marine Biological Association of the United Kingdom. 92: 1793-1798.
Currie, D., McClatchie, S., Middleton, J., Nayar, S. 2012. Biophysical factors affecting
the distribution of demersal fish around the head of a submarine canyon off the Bonney
Coast, South Australia. PlosOne 7: 1-16. doi: 10.1371/journal.pone.0030138
dos Santos, C.C.N., Leef, M.J., Jones, J.B., Bott, N.J., Giblot-Ducray, D. and Nowak,
B.F. (2012) Distribution of Cardicola forsteri eggs in the gills of Southern bluefin tuna
(Thunnus maccoyii) (Castelnau, 1872). Aquaculture 344-349: 54-57.
Frazer, H., Ellis, M. and Huveneers, C. (2012). Can a threshold value be used to
classify Chondrichthyan reproductive modes: review and validation using an oviparous
species. PLoS One (10.1371/journal.pone.0050196).
Hughes, T. P., Baird, A. H., Dinsdale, E. A., Moltschaniwskyj, N. A., Pratchett, M. S.,
Tanner, J. E. and Willis, B. L. (2012). Assembly rules of reef corals are flexible along a
steep climatic gradient. Current Biology. 22: 736-741.
Kemper, C.M., Middleton, J.F., and van Ruth, P.D. (2012) Association between pygmy
right whales (Caperea marginata) and areas of high marine productivity off Australia
and New Zealand. New Zealand Journal of Zoology. 40: 102-128.
Kovacs, K.M., Aguilar, A., Aurioles, D., Burkanov, V., Campagna, C., Gales, N., Gelatt,
T., Goldsworthy, S.D., Goodman, S.J., Hofmeyr, G.J.G., Härkönen, T., Lowry, L.,
Lydersen, C., Sipilä, T., Southwell, C., Stuart, S., Thompson, D., Trillmich, F. (2012).
Global threats to pinnipeds. Marine Mammal Science. 28: 414-436 (DOI:
10.1111/j.1748-7692.2011.00479.x)
Linnane, A., Hobday, D., Frusher, S. and Gardner, C. 2012. Growth rates of juvenile
southern rock lobster (Jasus edwardsii) estimated through a diver based tag-recapture
program. Marine and Freshwater Research 63: 110-118.
Lowther, A.D. and Goldsworthy, S.D. (2012) Head start: Australian sea lion pups gain
experience of adult male foraging grounds before weaning. Marine Biology. 159: 26872696.
Lowther, A.D., Harcourt, R.G., Goldsworthy, S.D. and Stow, A. (2012). Population
structure of adult female Australian sea lions is driven by fine scale foraging site fidelity.
Animal Behaviour. 83: 691-701.
Ma, Z., Qin, J.G., Hutchinson, W., Chen, B.N., 2012. Food consumption and selectivity
by larval yellowtail kingfish Seriola lalandi cultured at different live feed densities.
Aquaculture Nutrition. 19: 523-534.
Macdonald, J. I., McNeil, D. G. and Crook, D. A. (2012), Asteriscus v. lapillus:
comparing the chemistry of two otolith types and their ability to delineate riverine
populations of common carp Cyprinus carpio. Journal of Fish Biology, 81: 1715–1729.
Mayfield, S., Mundy, C., Gorfine, H., Hart, A. & Worthington, D. 2012. Fifty years of
sustained production from the Australian abalone fisheries. Reviews in Fisheries
Science, 20: 220-250.
McGarvey, R., Matthews, J. M. 2012. Low-cost estimates of mortality rate from single
tag recoveries: addressing short-term trap-happy and trap-shy bias. Canadian Journal
of Fisheries and Aquatic Sciences 69(3): 600-611. doi: 10.1139/f2011-175
McIntosh, R.R., Goldsworthy, S.D., Shaughnessy, P.P.D., Kennedy, C.W. and Burch, P.
(2012). Estimating pup production in a mammal with an extended and aseasonal
breeding season, the Australian sea lion (Neophoca cinerea). Wildlife Research 39(2),
137-148
McIntosh, R.R., Arthur, A.D., Dennis, T., Berris, M., Goldsworthy, S.D., Shaughnessy,
P.D. and Teixeira, C.E.P. (2012) Survival estimates for the Australian sea lion: negative
correlation of sea surface temperature with cohort survival to weaning. Marine Mammal
Science. 29: 84-108.
McIntosh, R.R., Goldsworthy, S.D., Shaughnessy, P.D., Kennedy, C.W. and Burch, P.
(2012). Estimating pup production in a mammal with an extended and aseasonal
breeding season, the Australian sea lion (Neophoca cinerea). Wildlife Research, 39:
137-48. (doi.org/10.1071/WR10222).
McKenzie J., Page B., Goldsworthy, S.D. and Hindell, M.A. (2012). Behavioural
responses of New Zealand fur seals (Arctocephalus forsteri) to darting and the
effectiveness of midazolam and tiletamine-zolazepam for remote chemical
immobilization. Marine Mammal Science. 29: 241-260.
Middleton, J. F., R. McGarvey, A. Linnane, S.M. Middleton, C.E.P. Teixeira, P.
Hawthorn. (2012). Using observations of bottom temperature to calibrate the output of
an ocean model. Journal of Marine Systems 91:34-40. doi:
10.1016/j.jmarsys.2011.09.006
Nayar, S., Collings, G., Pfennig, P. and Royal, M., 2012. Managing nitrogen into
seagrass meadows near a coastal city: Flow-on from research to Environmental
Improvement Plans. Marine Pollution Bulletin 64: 932 - 940.
Patterson, J.S., Nayar, S., Mitchell, J.G., Seuront, L., 2012. A local upwelling controls
viral and microbial community structure within South Australian continental shelf waters.
Estuarine, Coastal and Shelf Science, 96: 197-208.
Punt, A., McGarvey, R., Linnane, A., Phillips, J., Triantafillos, L. and Feenstra, J. 2012.
Evaluating empirical decision rules for southern rock lobster fisheries: A South
Australian example. Fisheries Research 115-116: 60-71.
Roberts, S.D., Dixon, C.D. Andreacchio, L. (2012) Temperature dependent larval
duration and survival of the western king prawn, Penaeus (Melicertus) latisulcatus
Kishinouye, from Spencer Gulf, South Australia. Journal of Experimental Marine
Biology and Ecolology 411:14-22 doi: 10.1016/j.jembe.2011.10.022
Rogers P.J., Huveneers C., Page B., Hamer D., Goldsworthy S.D., Mitchell J.G.,
Seuront L. (2012) A quantitative comparison of the diets of sympatric pelagic sharks in
gulf and shelf ecosystems off southern Australia. ICES Journal of Marine Science 69:
1448-1456. (DOI:10.1093/icesjms/fss100).
Saunders, R.J., Fowler, A.J., Gillanders, B. M. (2012) The use of food resources by
snapper, Chrysophrys auratus, from northern Spencer Gulf, South Australia. Marine
and Freshwater Research 63(8): 680-686. doi: 10.1071/MF11266
Saunders, R.J., Fowler, A.J., Gillanders, B.M. (2012) The spawning dynamics of
snapper (Chrysophrys auratus) in northern Spencer Gulf. South Australia New Zealand
Journal of Marine and Freshwater Research 46(4): 491-510. doi:
10.1080/00288330.2012.709522
Seuront L (2012) Hydrocarbon contamination and the swimming behavior of the
estuarine copepod Eurytemora affinis. In: Marine Ecosystems Intech : 229-266.
Tu, W.C., Mühlhäusler, B.S., James, M.J., Stone, D.A.J., Gibson, R.A., 2012. Dietary
alpha-linolenic acid does not enhance accumulation of omega-3 long chain
polyunsaturated fatty acids in barramundi (Lates calcarifer). Comp Biochem Physiol B
Biochem Mol Biol. 164: 29-37.
Tu W.C., Cook-Johnson, R.J. James M.J., Mühlhäusler B.S., Stone D.A.J., Gibson R.A.,
2012. Barramundi (Lates calcarifer) desaturase with Δ6/Δ8 dual activities.
Biotechnology Letter. 34: 1283-1296.
van Ruth, P. D., Qin, J. G., and Branford, A. J. (2012) Size dependent competition in
centric diatoms as a function of nitrogen and silicon availability. Open Journal of Marine
Science 2: 33-42.
Wedderburn, S. D., Hammer, M. P. and Bice, C. M. (2012) Shifts in small-bodied fish
assemblages resulting from drought-induced water level recession in terminating lakes
of the Murray-Darling Basin, Australia. Hydrobiologia 691, 35-46.
Books/book chapters
Li Y., Benkendorff K, Qin JG and Li X. 2012. Exploring correlations between spawning
mediated response and summer mortality in Pacific oyster Crassostrea gigas. In: Jian
Qin (ed), Oyster: Physiology, Distribution and Mortality. Nova Science Publishers, New
York, pp181-202.
Schapira M & Seuront L (2012) Picophytoplankton community structure in a hypersaline
coastal lagoon: role of salinity and links with viral and microbial communities. In: Aloysio
da Silva Ferrão Filho (ed.), Cyanobacteria: Toxicity, Ecology and Management. Nova
Science Publisher, New York
Zhang X, Li X, Clarke S, and Li X, 2012. The development of Pacific oysters
(Crassostrea gigas) produced using cryopreserved sperm. In: Jian Qin (ed), Oyster:
Physiology, Distribution and Mortality. Nova Science Publishers, New York, pp1-19.
Conference papers and posters
Bowyer, J.N., Qin, J.G., Smullen, R.P., Ward, L.R., Stone, D.A.J., 2012. The use of
plant and animal oils to improve the sustainable production of yellowtail kingfish, Seriola
lalandi. In: Miller, M.R. (Ed.), Report from the Biennial Scientific Meeting of the
Australasian Section of the American Oil Chemists Society (AAOCS), Adelaide,
November 2011. Nutrients, pp. 372-398
Tanner, J.E. Combining nature and technology to rehabilitate seagrasses in South
Australia. Society for Ecological Restoration Australasia Branch annual meeting, Perth,
28-30 Nov 2012.
Internal reports
Bice, C., Whiterod, N., Wilson, P., Zampatti, B. and Hammer, M (2012). The Critical
Fish Habitat Project: Reintroductions of threatened fish species in the Coorong, Lower
Lakes and Murray Mouth region in 2011/12. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2012/000348-1. SARDI Research Report Series No. 646. 43pp.
Bice, C.M., Zampatti, B.P., Jennings, P.R. and Wilson, P. (2012). Fish assemblage
structure, movement and recruitment in the Coorong and Lower Lakes in 2011/12.
South Australian Research and Development Institute (Aquatic Sciences), Adelaide.
SARDI Publication No. F2011/000186-3. SARDI Research Report Series No. 680. 53pp.
Fowler A.J., Steer, M.A., Huveneers, C., Lloyd, M.T. and Jackson, W.B (2012).
Understanding the movement of Snapper (Pagrus auratus) and its contribution to the
changing spatial structure of South Australia’s Snapper Fishery. Progress report for
2011-12. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. F2012/000366-1. SARDI Research Report Series No. 650. 69pp.
Frahn, K., Nicol, J and Strawbridge, A (2012). Current distribution and abundance of
Ruppia tuberosa in the Coorong. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2012/000074-1. SARDI
Research Report Series No. 615. 22pp.
Gehrig, S.L., Marsland, K.B., Nicol, J.M., and Weedon, J.T (2012). Chowilla Icon Site –
Floodplain Vegetation Monitoring, 2011 Interim Report. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2010/000279-2. SARDI Research Report Series No. 613. 53pp.
Gehrig, S.L., Marsland, K.B., Nicol, J.M. and Weedon, J.T. (2012). Chowilla Icon Site –
Floodplain Vegetation Condition Monitoring 2012 Interim Report. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2010/000279-3. SARDI Research Report Series No. 655. 56pp.
Gehrig, S. L., Nicol, J.M., Frahn, K.A. and Marsland K.B (2012). Lower Lakes
Vegetation Condition Monitoring – 2011/2012. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2009/000370-4. SARDI Research Report Series No. 640. 68pp.
Gluis, M.G (2012). Oyster basket volumes Coffin Bay, South Australia. Report to the
South Australian Oyster Growers Association. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2012/000183-1. SARDI Research Report Series No. 635. 12pp.
Goldsworthy, S.D., Page, B., Lowther, A., Shaughnessy, P.D. (2012). Maintaining the
monitoring of pup production at key Australian sea lion colonies in South Australia
(2010/11). Final report to the Australian Marine Mammal Centre. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2010/000665-2. SARDI Research Report Series No. 601. 64pp.
Ham, J., Riddell, H. and Clarke, S (2012). Marine Innovation Southern Australia. The
first seven years: a foundation for the future. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2012/000435-1. SARDI Research Report Series No. 642. 98pp.
Leigh, S. J., Gehrig, S. L., Wilson, P. J., Zampatti, B. P. and Nicol, J. M (2012).
Intervention monitoring of fish and fish habitats within the Katarapko Anabranch system
(‘Katfish’ Demonstration Reach): before intervention surveys 2010 and 2011. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2010/000994-2. SARDI Research Report Series No. 634. 46pp.
Leigh, S. J. and Zampatti, B. P (2012). Chowilla Icon Site – Fish Assemblage Condition
Monitoring 2011. South Australian Research and Development Institute (Aquatic
Sciences), Adelaide. SARDI Publication No. F2008/000907-3. SARDI Research Report
Series No. 597. 31pp.
Li, X (2012). Scope of Options to Establish Gamete Cryobanking Services to Genetic
Improvement Programs in Australian Aquaculture Industry. South Australian Research
and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2012/000027-1. SARDI Research Report Series No. 636. 84pp.
McGarvey, R., Burch, P. and Feenstra, J.E. (2012). Management Strategy Evaluation
for South Australian Snapper. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2010/000226-1. SARDI
Research Report Series No. 32p.
Nicol, J.M (2012). Understory Vegetation Monitoring of Chowilla Environmental
Watering Sites 2008-12. South Australian Research and Development Institute (Aquatic
Sciences), Adelaide. SARDI Publication No. F2010/000632-2. SARDI Research Report
Series No. 654. 64pp.
Schmarr, D.W., Mathwin, R., Cheshire, D.L. and McNeil, D.G. (2012). Aquatic ecology
assessment and analysis of the Cooper Creek catchment: Lake Eyre Basin, South
Australia. Report to the South Australian Arid Lands Natural Resource Management
Board. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2012/000442-1. SARDI Research Report Series No.
679. 175pp.
Wilson, P. J., Gehrig, S. L., Leigh, S. J., Bice, C., and Zampatti, B. P. (2012). Fish
assemblages, instream habitats and fish-habitat associations in the Katarapko
Anabranch system (‘Katfish’ Demonstration Reach): ‘Before’ intervention monitoring
2012. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2012/000441-1. SARDI Research Report Series No.
669. 46pp.
Wilson, P., Leigh, S., Bice, C. and Zampatti, B. (2012). Chowilla Icon Site Fish
Assemblage Condition Monitoring 2012. South Australian Research and Development
Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2008/000907-4. SARDI
Research Report Series No. 674. 48pp.
Ye, Q., Bucater, L., Short, D. and Earl, J (2012). Coorong fish condition monitoring
2008–2012: The black bream (Acanthopagrus butcheri), greenback flounder
(Rhombosolea tapirina) and smallmouthed hardyhead (Atherinosoma microstoma)
populations. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2011/000471-2. SARDI Research Report Series No.
649. 72pp.
Ye, Q., Bucater, L., Short, D. and Livore, J. (2012). Fish response to barrage releases
in 2011/12, and recovery following the recent drought in the Coorong. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2012/000357-1. SARDI Research Report Series No. 665. 81pp.
Zampatti, B.P., Bice, C.M. and Jennings, P.R (2012). Fish assemblage response and
fishway effectiveness at Goolwa, Tauwitchere and Hunters Creek Barrages in 2010/11.
South Australian Research and Development Institute (Aquatic Sciences), Adelaide.
SARDI Publication No. F2011/000186-2. SARDI Research Report Series No. 605. 66pp.
Client reports
Bott, N.J., Giblot-Ducray, D. and Sierp, M. (2012). Development of a qPCR assay for
the Black-striped Mussel, Mytilopsis sallei. Report prepared for Commonwealth
Department of Agriculture, Fisheries and Forestry & Biosecurity SA. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2012/000436-1. SARDI Publication No. 676. 18pp.
Bott, N.J. and Giblot-Ducray, D (2012). Development of a qPCR assay for the Pacific
Oyster, Crassostrea gigas. Report prepared for Biosecurity SA. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2012/000210-1. SARDI Research Report Series No. 641. 12pp
Burch, P. and Ward, T.M (2012). Estimating historical fishery catches/effort from
preliminary sanctuary zone scenarios in South Australia’s marine parks. Report to
PIRSA Fisheries and Aquaculture. South Australian Research and Development
Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2011/000307-2. SARDI
Research Report Series No. 599. 120pp.
Chick, R.C. and Mayfield, S (2012). Central Zone Abalone (Haliotis laevigata & H.
rubra) Fishery. Fishery Assessment Report to PIRSA Fisheries and Aquaculture. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2007/000611-4. SARDI Research Report Series No. 652. 67pp.
Dent, J., Mayfield, S., Burch, P., Gorman, D. and Ward, T.M (2012). Distribution,
harvestable biomass and fisheries biology of Katelysia spp. in the South Australian
commercial mud-cockle fishery. Report to PIRSA Fisheries and Aquaculture. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2010/000263-2. SARDI Research Report Series No. 595. 23pp.
Deveney, M.R., Jones, J.B. and Nowak, B.F (2012). Biosecurity risk assessment and
development of standardised mitigation for tuna and finfish aquaculture. Final Report
for the Fisheries Research and Development Corporation. South Australian Research
and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2012/000343-1. SARDI Research Report Series No. 561. 103pp.
Dixon, C.D., Hooper, G.E and Burch, P (2012). Gulf St Vincent Prawn, Penaeus
(Melicertus) latisulcatus, Fishery 2010/11. Fishery Assessment Report to PIRSA
Fisheries and Aquaculture. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2007/000782-5. SARDI
Research Report Series No. 631. 112pp.
Dixon, C. D., Hooper, G.E., Burch, P (2012). Spencer Gulf Prawn Penaeus (Melicertus)
latisulcatus Fishery 2010/11. Fishery Assessment Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2007/000770-5. SARDI Research Report Series No.
603. 118pp.
Dixon, C.D., Rodgers, G.G. and Hooper, G.E (2012). Blue Crab (Portunus armatus)
Fishery 2010/11. Fishery Assessment Report to PIRSA Fisheries and Aquaculture.
South Australian Research and Development Institute (Aquatic Sciences), Adelaide.
SARDI Publication No. F2007/000729–8. SARDI Research Report Series No. 604.
75pp.
Ferguson, G (2012). The South Australian Lakes and Coorong Fishery. Fishery Stock
Status Report for PIRSA Fisheries and Aquaculture. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2009/000669-3. SARDI Research Report Series No. 598. 17pp.
Ferguson, G.J. (2012). The South Australian Lakes and Coorong Fishery. Fishery
Stock Status Report for PIRSA Fisheries and Aquaculture. South Australian Research
and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2009/000669-4. SARDI Research Report Series No. 675. 17pp.
Ferguson, G. J. and Ye, Q (2012). Stock Assessment of Golden perch (Macquaria
ambigua). Stock Assessment Report for PIRSA Fisheries and Aquaculture. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide.
F2007/01051-1. SARDI Research Report Series No. 656. 55pp.
Fowler AJ, McGarvey R, Steer MA, Feenstra JE (2012). South Australian Marine
Scalefish Fishery – Stock Status Report 2011/12. Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide, F2007/000565-7, SARDI Research Report Series No. 681. Pp 44.
Gorman, D., Hooper, G.E. and Dixon, C.D (2012). West Coast Prawn, Penaeus
(Melicertus) latisulcatus Fishery 2011. Fishery Status Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2007/000772-5. SARDI Research Report Series No.
638. 22pp.
Huveneers, C., Rogers, P.J., Beckmann, C., Semmens, J., Bruce, B., and Seuront, L
(2012). Effects of a cage-diving operation on the fine-scale movement of white sharks
(Carcharodon carcharias). Final Report to the Department of Environment, Water and
Natural Resources Wildlife Conservation Fund and the Nature Foundation of South
Australia. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2012/000417-1. SARDI Research Report Series No.
657. 48pp.
Huveneers, C., Rogers, P.J., Drew, M (2012). Residency and movements of whaler
sharks (Carcharhinus spp.) in Gulf St Vincent. Final Report to the Nature Foundation of
South Australia. South Australian Research and Development Institute (Aquatic
Sciences), Adelaide. SARDI Publication No. F2012/000246-1. SARDI Research Report
Series No. 664. 35pp.
Izzo, C., Gillanders, B.M. and Ward, T.M. (2012). Movement patterns and stock
structure of Australian sardine (Sardinops sagax) off South Australia and the East
Coast: implications for future stock assessment and management. Final Report to the
Fisheries Research and Development Corporation. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2011/000487-1. SARDI Research Report Series No. 611. 102pp.
Linnane, A., Chick, R.C., Walker, T., Trinnie, F. and D. Reilly. (2012). Victorian Rock
Lobster and Giant Crab Fisheries Status Report 2011/2012. Fishery Status Report to
Fisheries Victoria. South Australian Research and Development Institute (Aquatic
Sciences), Adelaide. SARDI Publication No. F2012/000434-1. SARDI Research Report
Series No. 663. 36pp.
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distribution of the Australian snubfin dolphin (Orcaella heinsohni) in northern Australian
waters. Marine and Freshwater Research 62: 1303-1307
Parra, G. J., Corkeron, P. J. & Arnold, P. 2011. Grouping and fission–fusion dynamics
in Australian snubfin and Indo-Pacific humpback dolphins. Animal Behaviour 82, 14231433.
Partridge, G.J., D.D. Benetti., J.D. Stieglitz., J. Hutapea., A. McIntyre., B. Chen., W.
Hutchinson., V.P. Scholey. 2011. The effect of a 24-hour photoperiod on the survival,
growth and swim bladder inflation of pre-flexion yellowfin tuna (Thunnus albacares)
larvae. Aquaculture 318, 471 – 474.
Petrusevics, P., J.A.T. Bye, J. Luick, and C. Teixeira (2011) Summer sea surface
temperatures and elevated chlorophyll-a in the entrance to Spencer gulf, South
Australia. Continental Shelf Research, 31, 849-856.
Phillips, B.F., Melville-Smith, R., Linnane, A., Gardner, C., Walker, T. and Liggins, G.
(2011). ‘Are the spiny lobster fisheries in Australia sustainable?’. A manuscript. Journal
of the Marine Biological Association of India 52 (2): 139-161.
Prairie J.C. Franks P.J.S, Jaffe J.S., Doubell M.J. and Yamazaki H. (2011). Physical
and biological controls of vertical gradients in phytoplankton. Limnology and
Oceanography: Fluids and environments. Volume 1: 75–90. DOI: 10.1215/215736981267403.
Przeslawski, R., Currie, D.R., Sorokin, S.J., Ward, T.M., Althaus, F. and Williams, A.
(2011). Utility of a spatial habitat classification system as a surrogate of marine benthic
community structure for the Australian margin. ICES Journal of Marine Science , 68:
1954–1962.
Przeslawski, R, Williams, A, Ward, T.M. Sorokin, S., Currie, D. and Althaus, F. (2011).
The utility of a seascape habitat classification system as a surrogate of community
structure. ICES Journal of Marine Science doi:10.1093/icesjms/fsr 106 68 (9) 19541962
Punt, André E., Richard McGarvey, Adrian Linnane, Justin Phillips, Lianos Triantafillos,
John Feenstra. 2011. Evaluating empirical decision rules for southern rock lobster
fisheries: A South Australian example. Fisheries Research 115-116: 60-71
Seuront L. (2011) Behavioral fractality in marine copepods: endogenous rhythms vs.
exogenous stressors. Physica A, 309, 250-256.
Seuront L (2011) Obituary. Benoît B. Mandelbrot (1924-2010). Journal of Plankton
Research, 33, 983-988.
Seuront L (2011) Hydrocarbon contamination decreases mating success in a marine
planktonic copepod. PLoS ONE, 6(10):e26283
Seuront L & Cribb N (2011) Fractal analysis reveals pernicious stress levels related to
boat presence and type in the Indo-Pacific bottlenose dolphin, Tursiops aduncus.
Physica A. 390, 2333–2339
Shaughnessy, P.D., Goldsworthy, S.D., Hamer, D.J., Page, B., McIntosh, R.R. (2011).
Australian sea lions Neophoca cinerea at colonies in South Australia: distribution and
abundance, 2004 to 2008. Endangered Species Research. 13:87-98.
Simberloff, D. and 141 others including Deveney, M. 2011 Non-natives: 141 scientists
object. Nature 475, 36 (2011); doi: 10.1038/475036a Nature 474, 153–154
Speed, C.W., Meekan, M.G., Field, I.C., McMahon, C.R., Stevens, J.D., McGregor, K.F.,
Huveneers, C., Berger, Y., Bradshaw, C.J.A. (2011). Spatial and temporal niche
partitioning in coastal reef shark aggregations. Marine Ecology Progress Series, 429:
261–275.
Spilmont N, Seuront L, Meziane T & Welsh D (2011) There’s more to the picture than
meets the eye: sampling microphytobenthos in a heterogeneous environment.
Estuarine, Coastal and Shelf Science, 95, 470-476.
Tanner, J.E. (2011). Utilisation of the invasive alga Caulerpa taxifolia as habitat by
faunal assemblages in the Port River-Barker Inlet Estuary, South Australia. Estuaries
and Coasts. 34:831-838.
van Dongen–Vogels, Virginie, Justin R. Seymour, John F. Middleton, Jim G. Mitchell
and Laurent Seuront 2011: Shifts in picophytoplankton community structure influenced
by changing upwelling conditions. Estuarine, Coastal and Shelf Science, 109, 81-90.
van Dongen–Vogels V, Seymour JR, Middleton JF, Mitchell JG & Seuront L (2011)
Local physical events drive picophytoplankton space-time dynamics in South Australian
continental shelf waters. Journal of Plankton Research, 33, 1825-1841.
van Dongen-Vogels, Virginie, Justin R. Seymour, John F. Middleton, Jim G. Mitchell
and Laurent Seuront “Influence of local physical events on picophytoplankton spatial
and temporal dynamics in south australian continental shelf waters” Journal of Plankton
Research 33 (12): 1825–1841
Vilstrup, J., S. Ho, A. Foote, P. Morin, D. Kreb, M. Krutzen, G. J. Parra, K. Robertson, R.
de Stephanis, P. Verborgh, E. Willerslev, L. Orlando, and M. T. Gilbert. 2011.
Mitogenomic phylogenetic analyses of the Delphinidae with an emphasis on the
Globicephalinae. BMC Evolutionary Biology 11:65.
Wang, H., Li, X., Wang, M., Clarke, S., Gluis, M., Zhang, Z., 2011. Effects of larval
cryopreservation on subsequent development of the blue mussels, Mytilus
galloprovincialis Lamarck. Aquaculture Research 42: 1816-1823
Ward, T.M., Burch, P., McLeay, L.J. and Ivey, A.R. (2011). Use of the Daily Egg
Production Method for stock assessment of sardine, Sardinops sagax; lessons learned
over a decade of application off Southern Australia. Reviews in Fisheries Science 19(1),
1-20.
Ward, T.M.; Ivey, A.R. (2011) Assessing Options for Using a Continuous Underway
Fish Egg Sampler to Enhance Dedicated Daily Egg Production Studies Conducted from
Small Research Vessels. Open Fish Science Journal 4: 67-81.
Zhao C, Li X, Luo S, Chang Y, 2011. Assessments of lysosomal membrane responses
to stresses with neutral red retention assay and its potential application in the
improvement of bivalve aquaculture. African Journal of Biotechnology 10: 13968-13973.
Technical Papers
Beckmann, C., Huveneers, C. 2011. Notoraja sticta. In: IUCN 2011. IUCN Red List of
Threatened Species. www.redlist.org
Bigman, J., Ebert, D., Huveneers, C.2011. Centrophorus westraliensis. In: IUCN 2011.
IUCN Red List of Threatened Species. www.redlist.org
Heard, M., Huveneers, C. 2011. Parascyllium elongatum. In: IUCN 2011. IUCN Red List
of Threatened Species. www.redlist.org
Heard, M., Huveneers, C. 2011. Dentiraja flindersi. In: IUCN 2011. IUCN Red List of
Threatened Species. www.redlist.org
Heaven, C., Huveneers, C. 2011. Pavoraja arenaria. In: IUCN 2011. IUCN Red List of
Threatened Species. www.redlist.org
Robbins, R., Huveneers, C. 2011. Okamejei leptoura. In: IUCN 2011. IUCN Red List of
Threatened Species. www.redlist.org
Robbins, R., Huveneers, C. 2011. Dipturus acrobelus. In: IUCN 2011. IUCN Red List of
Threatened Species. www.redlist.org
Theiss, S.M., Huveneers, C., Ebert, D.A.2011. Chimaera argiloba. In: IUCN 2011. IUCN
Red List of Threatened Species. www.redlist.org
Theiss, S.M., Huveneers, C., Ebert, D.A.2011. Chimaera fulva. In: IUCN 2011. IUCN
Red List of Threatened Species. www.redlist.org
Theiss, S.M., Huveneers, C., Ebert, D.A.2011. Chimaera macrospina. In: IUCN 2011.
IUCN Red List of Threatened Species. www.redlist.org
Theiss, S.M., Huveneers, C., Ebert, D.A.2011. Chimaera obscura. In: IUCN 2011. IUCN
Red List of Threatened Species. www.redlist.org
Theiss, S.M., Huveneers, C., Ebert, D.A.2011. Hydrolagus homonycteris. In: IUCN
2011. IUCN Red List of Threatened Species. www.redlist.org
Theiss, S.M., Huveneers, C., Ebert, D.A.2011. Hydrolagus marmoratus. In: IUCN 2011.
IUCN Red List of Threatened Species. www.redlist.org
Books/Book Chapters
Hindell, M.A., Lea, M.A., Bost, C.A., Charrassin, J-B, Gales, N., Goldsworthy, S., Page,
B., Robertson, G., Wienecke, B., O’Toole, M., Guinet, C., (2011). Foraging habitats of
top predators, and Areas of Ecological Significance, on the Kerguelen Plateau. In:
Duhamel G and Welsford D (eds), The Kerguelen Plateau: marine ecosystem and
fisheries, Société Française d'lchtyologie, Abbeville, France, pp. 203-215. ISBN 29514628-6-7 (2011).
Conference Papers and Posters
Beckmann, Crystal L., Charlie Huveneers, Jim Mitchell, Laurent Seuront & David Stone.
Validation of the use of Fatty Acid Signatures to assess diet in sharks. The
Postgraduate Conference, School of Biological Sciences, Flinders University, Adelaide,
South Australia 28 – 30 June, 2011.
Bott, N. J. Molecular methods to aid identification of aquatic parasites. ASP Aquatic
Parasitology Workshop. Cairns, Queensland July 10, 2011
Bowyer, Jenna N., Jian G. Qin, Richard P. Smullen, Louise R. Ward, David A.J. Stone.
The influence of temperature on fish meal substitution with solvent extracted soybean
meal and soy protein concentrate in yellowtail kingfish, Seriola lalandi. Skretting
Australasian Aquaculture Conference, Melbourne, Australia, May 1 - 4, 2012.
Casper RM, Sumner MD, Hindell MA, Gales NJ, Staniland IJ and Goldsworthy SD.
(2011) The influence of diet on foraging habitat models. International Biologging
Symposium IV, Hobart, Tasmania, 13th-18th of March 2011.
Chapperon C & Seuront L (2011) Cooling down in the heat: the importance of
thermoregulatory behaviour in intertidal ectotherms. The 2011 Australasian Society for
the Study of Animal Behaviour Conference. April 11-13, 2011, Flinders University,
Adelaide, Australia.
Chilvers, L., Goldsworthy S.D. (2011) New Zealand sea lion. Update to IUCN Pinniped
Specialist Group. 19th Biennial Conference on the Biology of Marine Mammals (Tampa,
Florida), 27 Nov 2011.
Deveney, M. Wiltshire, K. Tanner, J. Giblot-Ducray, D and Bott, N. Field trials of
molecular tools for the detection of marine pests. Presentation. AMSA Conference,
Perth 5-7 August 2011.
Goldsworthy S.D. (2011) Australian sea lion. Update to IUCN Pinniped Specialist Group.
19th Biennial Conference on the Biology of Marine Mammals (Tampa, Florida), 27 Nov
2011.
Goldsworthy SD, Hamer DJ, Page,B, Lowther AD, Shaughnessy PD, Hindell M, Burch
P, Costa DP, Fowler SL, Peters K and McIntosh RR (2011) Correcting bycatch rates for
encounter probability: using satellite telemetry data to model the distribution of foraging
effort of a population of Australian sea lions to estimate and mitigate bycatch in a
demersal gillnet fishery. . International Biologging Symposium IV, Hobart, Tasmania,
13th-18th of March 2011.
Harcourt R, Field I, Hindell M, Lea M-A, Goldsworthy S, Page B and Boomer A.(2011)
The Australian Animal Tagging and Monitoring System (AATAMS). International
Biologging Symposium IV, Hobart, Tasmania, 13th-18th of March 2011.
Hindell MA, Bost C, Charrassin J-B, Gales N, Goldsworthy S, Lea M-A, O’Toole M and
Guinet C. (2011) Foraging habitats of top predators, and areas of ecological
significance on the Kerguelen Plateau. International Biologging Symposium IV, Hobart,
Tasmania, 13th-18th of March 2011.
Huveneers C, Bruce B, Beckmann C and Semmens J (2011) Assessing the impacts of
berleying from shark cage-diving operators on the swimming behaviour of the white
shark (Carcharodon carcharias). 13th-18th of March 2011. International Biologging
Symposium IV, Hobart, Tasmania
Lowther A.D, Harcourt, R., Goldsworthy S. D., Stow, A. (2011) Buying local: population
structure and fine-scale foraging site fidelity of adult female Australian sea lions. 19th
Biennial Conference on the Biology of Marine Mammals (Tampa, Florida), 28 Nov – 2
Dec.
Lowther AD, Harcourt RG, Hamer D and Goldsworthy SD. (2011) Avoiding the crowds:
combining fine-scale biologging and stable isotope biogeochemistry to assess the
temporal stability of alternate foraging behaviours of adult female Australian sea lions.
International Biologging Symposium IV, Hobart, Tasmania, 13th-18th of March 2011.
Page B, Goldsworthy SD, Miller D, Abernathy K, Marshall G, Daniel O, McDonald B and
Bryars S. (2011) Using well-equipped Australian sea lions to assess habitat quality and
inform the zoning of Marine Parks in South Australia. International Biologging
Symposium IV, Hobart, Tasmania, 13th-18th of March 2011.
Ahmad, Wan Abdul Rahim W., Kathryn A. Schuller, Jian Qin & David Stone. A study of
alternative dietary oils source in barramundi (Lates calcarifer). The Postgraduate
Conference, School of Biological Sciences, Flinders University, Adelaide, South
Australia 28 – 30 June, 2011.
Rogers, P, Goldsworthy, SD, Page, B, Huveneers, C, Seuront, L and Mitchell, J.(2011)
Migration patterns and habitat preferences of the shortfin mako shark, Isurus
oxyrinchus, in the Southern, Indian and SW Pacific Oceans. 13th-18th of March 2011.
International Biologging Symposium IV, Hobart, Tasmania
David A.J. Stone, Richard .P. Miegel, Sarah .J. Pain and Gordon .S. Howarth. Water
temperature effects gut transit time, digestive enzyme activity and nutrient digestibility
in yellowtail kingfish, Seriola lalandi. Skretting Australasian Aquaculture Conference,
Melbourne, Australia, May 1 - 4, 2012.
Wiltshire, K. Rowling, K. Fernandes, M. Collings, G. Tanner, J. and Deveney, M.
Assessing risks and impacts of the invasive alga Caulerpa taxifolia in South Australia.
Presentation. AMSA Conference, Perth 5-7 August 2011.
Wiltshire, K. and Deveney, M. Investigating the occurrence and range of introduced
marine species in South Australia. Poster. AMSA Conference, Perth 5-7 August 2011.
Internal Reports
Beyer, K., Gehrig, S., Leigh, S. J., Nicol, J. M. and Zampatti, B. P (2011). Intervention
Monitoring at the Katarapko Native Fish Demonstration Reach (‘Katfish Reach’), South
Australia: Progress Report. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2010/000994-1. SARDI
Research Report Series No. 520. 54pp.
Knight, M.A. and Tsolos, A (2011). South Australian Wild Fisheries Information and
Statistics Report 2009/10. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2008/000804-3. SARDI
Research Report Series No. 521. 60pp.
Schmarr, D.W., Mathwin, R. and McNeil, D.G (2011). Mapping threats to aquatic biota
movement and recovery with the provision of environmental water in selected reaches
of the South Para, Torrens and Onkaparinga Rivers - RESTRICTED. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2011/000418-1. SARDI Research Report Series No. 570. 8pp.
Wiltshire, K.H. and Deveney, M.R (2011). Final monitoring report for the 2010-2011
marine pest survey of the Port of Adelaide, South Australia. South Australian Research
and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2011/000386-1. SARDI Research Report Series No. 575. 34pp.
Zampatti, B.P., Leigh, S.J. and Nicol, J.M (2011). Fish and Aquatic Macrophyte
Communities in the Chowilla Anabranch System, South Australia. A report on
investigations from 2004 – 2007. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2010/000719-1. SARDI
Research Report Series No. 525. 180pp.
Client Reports
Aldridge, K., Goodman, A., Nicol, J., Gehrig, S. and Ganf, G. (2011). 'Using recent
wetting events to detect salinity thresholds for aquatic plants in the South-East of South
Australia. Goyder Institute for Water Research, Technical Report. Series No. 11/6,
Adelaide. 20pp.
Austin, D., Mackie, J., Byers, B., and Nayar, S. 2011. Utilisation of nutrients and uptake
of metals in wastewater for algae to energy production: Algal Bioenergy Technology
Assessment; Final Report prepared for Melbourne Water Corporation. CH2M Hill
Australia Pty Ltd, Melbourne. p. 77.
Bice, C., Hammer, M., Wilson, P. and Zampatti, B (2011). Fish monitoring for the
‘Drought Action Plan for South Australian Murray-Darling Basin threatened freshwater
fish populations’: Summary for 2010/11. South Australian Research and Development
Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2010/000647-2. SARDI
Research Report Series No. 564. 214pp.
Bice, C. and Zampatti, B (2011). Response of fish to the ‘Goolwa Channel Water Level
Management Plan’: 2009-2011. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2010/000703-2. SARDI
Research Report Series No 541. 45pp
Bott, N.J. and Giblot-Ducray, D. (2011). Molecular tools for detection of marine pests:
Musculista senhousia, Corbula gibba and Perna canaliculus Quantitative PCR assays.A
report prepared for Biosecurity SA. South Australian Research and Development
Institute (Aquatic Sciences), SARDI Publication No. F2010/000991-1. SARDI Research
Report Series No. 522. 22pp. Report for Biosecurity SA.
Bott, N.J. and Giblot-Ducray, D (2011). Molecular tools for detection of marine pests:
Development of diagnostic PCR assays for the detection of significant marine pests:
Carcinus maenas, Ciona intestinalis and Undaria pinnatifida. Report prepared for
Adelaide & Mt Lofty Ranges Natural Resources Management Board. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2011/000503-1. SARDI Research Report Series No. 587. 24pp.
Bryars S, Rogers P, Huveneers C, Payne N, Smith I, and McDonald B. (2011). What
size do Marine Park Sanctuary Zones need to be to protect the Western Blue Groper
Achoerodus gouldii, Harlequin Fish Othos dentex, and Bluethroat Wrasse Notolabrus
tetricus? Final Report to DENR. Wildlife Conservation Fund Project Number 0638. 36
pp.
Clarke, S., Li, X. and Ellis, D. (2011). Southern bluefin tuna Thunnus maccoyii. In: G.T.
Pecl, Z. Doubleday, T. Ward, S. Clarke, J. Day, C. Dixon, S. Frusher, P. Gibbs, A.
Hobday, N. Hutchinson, S. Jennings, K. Jones X. Li, D. Spooner and R. Stoklosa. Risk
assessment of impacts of climate change for key marine species in south eastern
Australia. Fisheries Research and Development Corporation, Project 2009/070
Currie, D.R (2011). South Australian Giant Crab (Pseudocarcinus gigas) Fishery Status
Report 2009/10. Fishery Status Report to PIRSA Fisheries & Aquaculture. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2011/000332-1. SARDI Research Report Series No. 568. 8pp.
Currie, D.R (2011). South Australian Giant Crab (Pseudocarcinus gigas) Fishery Status
Report 2010/11. Status Report to PIRSA Fisheries & Aquaculture. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2011/000332-2. SARDI Research Report Series No. 591. 9pp.
Currie, D.R. (2010). Southern Surveyor Voyage Summary SS02_2010T. Deep water
benthic biodiversity of the GAB Marine Park. Report to the Marine National Facility.
Published online at http://www.marine.csiro.au/nationalfacility/voyagedocs/2010/MNFSS2010_t02_summary.pdf.
Currie, D.R. and Sorokin, S.J. (2011). A comparison of megafaunal biodiversity in two
contrasting submarine canyons on Australia’s southern continental margin. Report to
the South Australian Department of Environment and Natural Resources. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Aquatic Sciences Publication Number F2010/000981-1, SARDI Research Report Series
Number 519. 49pp.
Currie, D.R. and Sorokin, S.J (2011). A preliminary assessment of the deepwater
benthic communities of the Great Australian Bight Marine Park. Report to the Australian
Government Department of Sustainability, Environment, Water, Population and
Communities and the South Australian Department of Environment and Natural
Resources. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2011/000526-1. SARDI Research Report Series No.
592. 61pp.
Currie, D.R. and Ward, T.M (2011). Estimating historical catches from preliminary
sanctuary zone scenarios in South Australia’s marine parks. Report to the Primary
Industries and Resources South Australia Fisheries and Aquaculture. South Australian
Research and Development Institute (Aquatic Sciences
Currie, D.R. and Ward, T.M. (2011). Estimating historical fishery catches from proposed
sanctuary zone scenarios in South Australia’s Marine Protected Areas. Report to
Primary Industries and Resources South Australia Fisheries and Aquaculture. SARDI
Aquatic Sciences Publication No. F2011/000307-1. SARDI Research Report Series
No.557.
Deveney, M. and Wiltshire, K. (2011). Chemical discharge standards to ensure
environmental protection following ballast water or biofouling treatment processes.
Report for the Department of Agriculture, Fisheries and Forestry (DAFF).
Dixon, C.D., Roberts, S.D. & Hooper, G.E (2011). Gulf St Vincent Prawn, Penaeus
(Melicertus) latisulcatus, Fishery 2009/10. Fishery Assessment Report to PIRSA
Fisheries and Aquaculture. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2007/000782-4. SARDI
Research Report Series No. 526. 121pp.
Dixon, C.D. and Hooper, G.E (2011). Blue Crab (Portunus armatus) Fishery 2009/10.
Stock Assessment Report to PIRSA Fisheries and Aquaculture. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2007/000729–7. SARDI Research Report Series No. 531. 77pp
Ferguson, G (2011). The South Australian Lakes and Coorong Fishery. Fishery Stock
Status Report for PIRSA Fisheries. South Australian Research and Development
Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2009/000669-2. SARDI
Research Report Series No. 527. 17pp.
Ferguson, G. and Ward, T.M (2011). Mulloway (Argyrosomus japonicus) Fishery.
Fishery Stock Assessment Report for PIRSA Fisheries and Aquaculture. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2007/000898-2. SARDI Research Report Series No. 573. 104pp.
Fowler, A.J., McGarvey, R., Burch, P. and Feenstra, J.E (2011). King George Whiting
(Sillaginodes punctatus) Fishery. Fishery Assessment Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2007/000843-3. SARDI Research Report Series No.
562. 89pp
Fowler, A.J., McGarvey R., Steer, M.A. and Feenstra, J.E (2011). The South Australian
Marine Scalefish Fishery Stock Status Report. Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2007/000565-6. SARDI Research Report Series No.
586. 29pp.
Gehrig, S.L., Nicol, J.M. and Bucater, L. (2011). 'Aquatic and littoral vegetation
monitoring of Goolwa Channel 2009-11.' South Australian Research and Development
Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2010/000383-2. SARDI
Research Report Series No.555. 47pp.
Gehrig, SL, Nicol, JM and Marsland, KB 2011. Lower Lakes vegetation condition
monitoring – 2010/2011. South Australian Research and Development Institute (Aquatic
Sciences), Adelaide. 64 pp. SARDI Publication Number F2010/000370-3. SARDI
Research Report Series No. 567. 64pp
Gillanders, B.M.1 and Ye, Q (2011). Ecological risk assessment of stocking Murray cod
in South Australia. Report to PIRSA Fisheries and Aquaculture. School of Earth and
Environmental Sciences, The University of Adelaide, Adelaide and South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2011/000299-1. SARDI Research Report Series No. 571. 26pp.
Goldsworthy, S.D., Page, B., Kennedy, C., Welz K, Shaughnessy, P.D. (2011)
Australian sea lion population monitoring at Seal Bay and the Seal Slide, Kangaroo
Island: 2010 breeding season. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2011/000216-1. SARDI
Research Report Series No. 556. 36 pp.
Goldsworthy, S.D., Page, B., Rogers, P. and Ward, T (2011). Establishing ecosystembased management for the South Australian Sardine Fishery: developing ecological
performance indicators and reference points to assess the need for ecological
allocations. Final Report to the Fisheries Research and Development Corporation.
South Australian Research and Development Institute (Aquatic Sciences), Adelaide.
SARDI Publication No. F2010/000863-1. SARDI Research Report Series No. 529.
173pp.
Ham, J., Madigan, S., Mantilla, E. and King, R (2011). Can they hear me? Modern and
innovative strategies to communicate with the seafood industry. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2011/000106-1. SARDI Research Report Series No. 533. Australian Seafood
Cooperative Research Centre (CRC), Australian Seafood CRC Project No. 2009/747.
15pp.
Hooper, G.E., Dixon, C.D. and Roberts, S.D (2011). West Coast Prawn, Penaeus
(Melicertus) latisulcatus Fishery, 2010. Fishery Status Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2007/000772-4. SARDI Research Report Series No.
563. 20pp.
Knight, M.A. and Vainickis, A.A (2011). Confidential 2010/11 Data Summary of the
South Australian Recreational Charter Boat Fishery. Report to PIRSA Fisheries and
Aquaculture - RESTRICTED. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2011/000437-1. SARDI
Research Report Series No. 579. 13pp.
Knight, M.A. and Vainickis, A.A (2011). Interactions with Threatened, Endangered or
Protected Species in South Australian Managed Fisheries – 2007/08, 2008/09, and
2009/10. Report to PIRSA Fisheries and Aquaculture. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2009/000544-1. SARDI Research Report Series No.534. 44pp.
Knight, M.A. and Vainickis, A.A (2011). Interactions with Threatened, Endangered or
Protected Species in South Australian Managed Fisheries – 2008/09, 2009/10, and
2010/11. Report to PIRSA Fisheries and Aquaculture. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2009/000544-2. SARDI Research Report Series No. 593. 41pp.
Knight, M.A. and Vainickis, A.A (2011). Non-Confidential 2010/11 Data Summary of the
South Australian Recreational Charter Boat Fishery. Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2011/000438-1. SARDI Research Report Series No.
580. 13pp.
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Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Southern Bluefin Tuna (Thunnus
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Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Southern Bluefin Tuna (Thunnus
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Loo, M. G. K., Ophel-Keller, K. and McKay, A (2011). Southern Bluefin Tuna (Thunnus
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Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Southern Bluefin Tuna (Thunnus
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Loo, M. G. K., Ophel-Keller, K. and McKay, A (2011). Southern Bluefin Tuna (Thunnus
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Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Southern Bluefin Tuna (Thunnus
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Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Southern Bluefin Tuna (Thunnus
maccoyii) Aquaculture Environmental Monitoring Program 2009 Report: Blaslov Fishing
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Bluefin Tuna Industry Association Inc - RESTRICTED. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2009/000585-3. SARDI Research Report Series No. 547. 24pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A (2011). Southern Bluefin Tuna (Thunnus
maccoyii) Aquaculture Environmental Monitoring Program 2009 Report: Sekol Pty Ltd,
Licence Numbers AQ00060 and AQ00059. Report prepared for the Australian Southern
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F2009/000585-3. SARDI Research Report Series No. 548. 24pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Southern Bluefin Tuna (Thunnus
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prepared for the Australian Southern Bluefin Tuna Industry Association Inc. South
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Loo, M. G. K., Ophel-Keller, K. and McKay, A (2011). Southern Bluefin Tuna (Thunnus
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Sciences), Adelaide. SARDI Publication No.F2009/000585-3. SARDI Research Report
Series No. 549. 24pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Southern Bluefin Tuna (Thunnus
maccoyii) Aquaculture Environmental Monitoring Program 2010 Report: SAMS Sea
Farm Pty Ltd, Licence Number AQ00112. Report prepared for the Australian Southern
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Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2009/000585-3. SARDI
Research Report Series No. 550. 23pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A (2011). Southern Bluefin Tuna (Thunnus
maccoyii) Aquaculture Environmental Monitoring Program 2009 Report: SAMS Sea
Farm Pty Ltd, Licence Numbers AQ00112. Report prepared for the Australian Southern
Bluefin Tuna Industry Association Inc - RESTRICTED. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No.F2009/000585-3. SARDI Research Report Series No. 550. 24pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Southern Bluefin Tuna (Thunnus
maccoyii) Aquaculture Environmental Monitoring Program 2010 Report: Dinko Tuna
Farmers Pty Ltd, Licence Number AQ00170. Report prepared for the Australian
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F2009/000585-3. SARDI Research Report Series No. 551. 23pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A (2011). Southern Bluefin Tuna (Thunnus
maccoyii) Aquaculture Environmental Monitoring Program 2009 Report: Dinko Tuna
Farmers Pty Ltd, Licence Numbers AQ00170. Report prepared for the Australian
Southern Bluefin Tuna Industry Association Inc - RESTRICTED. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No.F2009/000585-3. SARDI Research Report Series No. 551. 24pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A (2011). Southern Bluefin Tuna (Thunnus
maccoyii) Aquaculture Environmental Monitoring Program 2009 Report: Eyre Tuna Pty
Ltd, Licence Numbers FB00051. Report prepared for the Australian Southern Bluefin
Tuna Industry Association Inc - RESTRICTED. South Australian Research and
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No.F2009/000585-3. SARDI Research Report Series No. 552. 24pp
Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Yellowtail Kingfish (Seriola
lalandi) Aquaculture Environmental Monitoring Program 2009/10 Report for Southern
Star Aquaculture Pty Ltd, Fitzgerald Bay, South Australia: Licence Number FF00030.
South Australian Research and Development Institute (Aquatic Sciences). Adelaide.
SARDI Publication No. F2010/000207-2. SARDI Research Report Series No. 537. 18
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Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Yellowtail Kingfish (Seriola
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Aquaculture Growout Pty Ltd, Fitzgerald Bay, South Australia: Licence Numbers
FF00026 and FF00029. South Australian Research and Development Institute (Aquatic
Sciences). Adelaide. SARDI Publication No. F2010/000207-2. SARDI Research Report
Series No. 538. 19 pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Yellowtail Kingfish (Seriola
lalandi) Aquaculture Environmental Monitoring Program 2009/10 Report for Cleanseas
Aquaculture Growout Pty Ltd, Arno Bay, South Australia: Licence Numbers AQ00017,
AQ00018 and FB00078. South Australian Research and Development Institute (Aquatic
Sciences). Adelaide. SARDI Publication No. F2010/000207-2. SARDI Research Report
Series No. 539. 20 pp.
Loo, M. G. K., Ophel-Keller, K. and McKay, A. (2011). Yellowtail Kingfish (Seriola
lalandi) Aquaculture Environmental Monitoring Program 2009/10 Report for Cleanseas
Aquaculture Growout Pty Ltd, Boston Bay, South Australia: Licence Numbers AQ00015,
FF00090, FF00084, FF00085 and Aq00139. South Australian Research and
Development Institute (Aquatic Sciences). Adelaide. SARDI Publication No.
F2010/000207-2. SARDI Research Report Series No. 540. 22 pp
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Aquaculture Environmental Monitoring Program 2009/10 Report for Cleanseas
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Lowther, A.D.1 2, Goldsworthy, S.D.2, Harcourt, R.3, Donnellan, S.4, and Page, B5
(2011). Structure and subdivision of the Australian sea lion - defining species-wide
management units using ecological and genetic information. Final report to the Wildlife
Conservation Fund, Department of Environment and Natural Resources, South
Australia. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2011/000421-1. SARDI Research Report Series No.
576. 15pp.
Mayfield, S. and Hogg, A (2011). Southern Zone Abalone Fishery (Haliotis rubra & H.
laevigata). Fishery Assessment Report for PIRSA Fisheries and Aquaculture. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2007/000552-3. SARDI Research Report Series No. 535. 57pp.
McNeil, D. G. and Fredberg, J (2011). Environmental Water Requirements of native
fishes in the Middle River catchment, Kangaroo Island, South Australia. A report to the
SA Department for Water. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2011/000060-1. SARDI
Research Report Series No. 528. 50pp.
McNeil, D.G, Schmarr, D.W and Mathwin, R (2011). Condition of Freshwater Fish
Communities in the Adelaide and Mount Lofty Ranges Management Region. Report to
the Adelaide and Mount Lofty Ranges Natural Resources Management Board. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2011/000502-1. SARDI Research Report Series No. 590. 65pp.
McNeil, D.G., Schmarr, D.W., Wilson, P.J. and Reid D. J (2011). Fish Community and
Flow Ecology in the Western Mount Lofty Ranges Environmental Water Provisions Trial
Reaches. Final Report to the Adelaide and Mount Lofty Ranges Natural Resources
Management Board and the SA Department for Water. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Research Report Series No.
581. 238pp.
McNeil, D. G, White, M. and Schmarr, D. W (2011) Assessment of endemic fish
(Mogurnda clivicola) and native vegetation at springs in the northern Flinders Ranges.
Report to the South Australian Arid Lands Natural Resources Management Board, Port
Augusta. South Australian Research and Development Institute and South Australian
Department for Water. SARDI Research Report Series No. 518. 92pp.
McNeil, D.G., Hartwell, D., Conallin, A.J., and Stuart, I.G. (2011) Baseline trials of carp
control technologies in wetlands of the lower Lachlan River. Report to the Lachlan
Catchment Management Authority and the Invasive Animals Cooperative Research
Centre. SARDI Report Series 516. South Australian Research and Development
Institute (Aquatic Sciences), Adelaide, 54pp.
Middleton, J.F., James, C.E., Luick, J.L., Goldsworthy, S., Tsolos, A., Teixeira, C.E.P.
and Richardson, L (2011). Survey of Sonar Test Sites, Phase 1, Literature Review.
Final Report for the Defence Science and Technology Organisation. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2011/000212-1. SARDI Research Report Series No. 566. 67pp.
Nayar, S., Bott, K. and Braley, M. (2011). Technical progress report on ‘Strain selection
and improvement’ and ‘development and optimisation of high rate algal production
systems’ for the project “developing a proof-of-concept facility for microalgal biodiesel
feedstock and value-added products to pioneer a sustainable South Australian biofuels
industry”. Submitted to Flinders Partners on 7 February 2011. 19pp.
Page, B. Goldsworthy, S.D and Shaughnessy, P.D (2011). Assessment of the proposed
changes to the boardwalks and tours at Seal Bay, Kangaroo Island. Final report to the
Department of Environment and Natural Resources - RESTRICTED. South Australian
Research and Development Institute (Aquatic Sciences), Adelaide. SARDI Publication
No. F2011/000047-1. SARDI Research Report Series No. 523. 94pp.
Steer, M.A., McGarvey, R., Fowler, A.J., Jackson, W.B. and Lloyd, M.T (2011).
Promoting stock recovery through the standardisation of fishing gear: streamlining the
hauling net sector of South Australia’s Garfish Fishery. Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2011/000412-1. SARDI Research Report Series No.
578. 55pp.
Stobart, B., Dent, J.J., Matthews, D., Chick, R.C. and Mayfield, S (2011). Western Zone
Abalone (Haliotis rubra & H. laevigata) Fishery (Region A). Fisheries status report to
PIRSA Fisheries and Aquaculture. South Australian Research and Development
Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2011/000290-1. SARDI
Research Report Series No. 565. 46pp.
Thwaites, L. A (2011). Proof of concept of a novel wetland carp separation cage at
Lake Bonney, South Australia. A summary report for the Invasive Animals Cooperative
Research Centre and the South Australian Murray-Darling Basin Natural Resources
Management Board. South Australian Research and Development Institute (Aquatic
Sciences), Adelaide. SARDI Publication No. F2011/000086-1. SARDI Research Report
Series No. 530. 38pp.
Ward, T.M., Ivey, A.R. and Burch, P (2011). Spawning Biomass of sardine, Sardinops
sagax, in waters off South Australia in 2011. Report to PIRSA Fisheries and
Aquaculture. South Australian Research and Development Institute (Aquatic Sciences),
Adelaide. SARDI Publication No. F2007/000566-4. SARDI Research Report Series No.
584. 31pp.
Ward, T.M., Ivey, A., Hamer, D.J. and Burch, P (2011). Effectiveness of an industry
Code of Practice in mitigating the operational interactions of the South Australian
Sardine Fishery with the short-beaked common dolphin (Delphinus delphis). Report to
PIRSA Fisheries and Aquaculture. South Australian Research and Development
Institute (Aquatic Sciences), Adelaide. SARDI Publication No. F2010/000726-2. SARDI
Research Report Series No. 583. 33pp.
Ward, T.M., Lyle, J., Keane, J.P., Begg, G., Hobsbawn, P., Ivey, A.R., Sakabe, R. and
Steer, M.A (2012). Commonwealth Small Pelagic Fishery: Status Report 2010. Report
to Australian Fisheries Management Authority. South Australian Research and
Development Institute (Aquatic Sciences), Adelaide. SARDI Publication No.
F2010/000270-2. SARDI Research Report Series No. 524. 85pp.
Wiebkin, A. S (2011) Conservation management priorities for little penguin populations
in Gulf St Vincent. Report to Adelaide and Mount Lofty Ranges Natural Resources
Management Board. South Australian Research and Development Institute (Aquatic
Sciences), Adelaide. SARDI Publication No. F2011/000188-1. SARDI Research Report
Series No. 588. 97pp.
Ye, Q., Bucater, L., Ferguson, G., and Short, D. A. (2011). Coorong Fish Condition
Monitoring 2008-2010: Population and recruitment status of Black Bream
(Acanthopagrus butcheri) and Greenback Flounder (Rhombosolea tapirina). ICES
Document F2011/000331-1. 55 pp. SARDI Publication No. F2011/000331-1. SARDI
Research Report Series No. 572. 55pp.
Ye, Q., Bucater, L. and Short, D (2011). Coorong fish condition monitoring 2008/09–
2009/10: population and recruitment status of the smallmouthed hardyhead
(Atherinosoma microstoma). South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication Number F2010/000980-1. SARDI
Research Report Series Number 594. 35pp.
Ye, Q., Bucater, L. and Short, D (2011). Coorong fish intervention monitoring during
barrage releases in 2010/11. South Australian Research and Development Institute
(Aquatic Sciences), Adelaide. SARDI Publication No. F2011/000309-1. SARDI
Research Report Series No. 559. 57pp.
Ye, Q., Bucater, L. and Short, D (2011). Coorong fish condition monitoring 2008–2011:
the black bream (Acanthopagrus butcheri), greenback flounder (Rhombosolea tapirina)
and smallmouthed hardyhead (Atherinosoma microstoma) populations. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2011/000471-1. SARDI Research Report Series No. 582. 55pp.
Zampatti, B.P., Bice, C.M. and Jennings, P.R (2011). Fish assemblage structure,
movement and recruitment in the Coorong and Lower Lakes from 2006-2010. South
Australian Research and Development Institute (Aquatic Sciences), Adelaide. SARDI
Publication No. F2011/000186-1. SARDI Research Report Series No. 569. 43pp.