Biology EOC Review Goal 3: Learner will develop an understanding of the continuity of life and the changes of organisms over time. 3.01: Analyze the molecular basis of heredity including: DNA replication, Protein Synthesis (transcription and translation), and gene regulation. p. 286-312 Below is a strand of DNA. DNA in the cells exists as a double helix – 1. Circle one nucleotide. What 3 pieces is it made up of? Phosphate group, sugar (deoxyribose), nitrogen base 2. What are the black pentagons? deoxyribose What are the nitrogen bases? A,C,G,T ___C__ __T___ __G___ _G__ _C___ __T___ 3. Fill in the blanks with the complimentary DNA bases. 4. If a strand of DNA undergoes transcription, what will the sequence of the mRNA be? DNA = G A C T G A mRNA = C U G A C U tRNA = G A C U G A Label the summary of protein synthesis diagrammed below: DNA Transcription mRNA Nucleus Cytoplasm mRNA tRNA Ribosome Anticodon Codon Amino Acid Polypeptide Chain / Protein Nuclear Membrane rRNA Translation Biology EOC Review 5. After translation, what would the amino acid sequence be for the section of mRNA above? (read from right to left) Leu-Thr 6. What is a codon? 3 nucleotide sequence on the mRNA that codes for an amino acid or start or stop signal What is an anti-codon? 3 base sequence on the tRNA that is complimentary to a codon to determine if the amino acid is added 7. Compare RNA and DNA in the following table RNA DNA Sugars Ribose Deoxyribose Bases A,C,G,U A,C,G,T Strands 1 1 2 or 2 Where Made in nucleus Nucleus In Cell but moves to (eukaryotes) cytoplasm Function Protein Store genetic synthesis info (info to make proteins) 8. What kinds of bonds hold the amino acids together in the protein that is formed? Peptide bonds 9. What are the three types of RNA and what are their functions? 1) mRNA- carries information from DNA in the nucleus to the ribosome in the cytoplasm 2) rRNA- makes up the structure of the ribosome 3) tRNA- brings correct amino acid to the ribosome to assemble protein 10. What kind of weak bonds hold the two strands of DNA together between the nitrogen bases? Hydrogen bonds 11. Why is it important that these bonds be weak? They will need to be broken for replication and for transcription. 12. What happens to DNA when a mutation occurs? The code is changed (different bases are in the DNA strand). 13. How does this affect the mRNA? Bases in mRNA will be different. 14. How can this affect translation? This may mean a different amino acid is in the protein strand. 15. How does this affect the structure and shape of the resulting protein? This can cause a change in the shape of the protein, causing it to possibly not function. 16. Where in the cell does transcription occur? Nucleus 17. Where in the cell does translation occur? In the cytoplasm at the ribosome Biology EOC Review Cell Cycle: p. 244-253 1. Look at the diagram of the cell cycle. When does the replication of DNA occur? What is this phase called? Interphase (S phase – synthesis) 2. What do GI and G2 represent? G1 – equals growth after cell division; G2 is growth after DNA replicates. 3. Does mitosis include cytokinesis (division of the cytoplasm)? NO 1. G1 2. S 3. G2 4. Mitosis 5. Cytokinesis Gene Expression and Regulation p. 309-312 1. If all the cells in an organism (cells with nuclei) have the same DNA, explain, in terms of genes, how a nerve cell functions differently from a muscle cell. Different genes are turned on in different types of cells. 2. Why does a pancreas cell produce insulin in great amounts but a blood cell does not? Because the insulin gene is turned on in the pancreas cell but not as much in a blood cell. 3. There are advantages and disadvantages to the overproduction of proteins by a cell. Describe the advantages and disadvantages for an injured cell. Overproduction in an injured cell can help it heal if the proteins are needed; but overproduction of unneeded proteins could hinder healing. 4. Describe the advantages and disadvantages in a cancerous cell. Too much of certain proteins in a cancerous cell could promote tumor production in other cells. 3.02 Compare and contrast the characteristics of asexual and sexual reproduction. MITOSIS p. 246-248 MEIOSIS p. 275-278 Type of reproduction Asexual Sexual (Asexual or sexual) Chromosome number of mother 2N 2N cell (1N=haploid or 2N=diploid) Chromosome number of 2N 1N daughter cells (1N=haploid or 2N=diploid) Number of cell divisions 1 division 2 divisions Number of cells produced 2 4 When does replication happen? Interphase (S phase) SOURCES OF VARIATION Yes or No Interphase (S phase) before cell divides the first time Yes or No Crossing over Random assortment of chromosomes Gene mutations Nondisjunction fertilization NO NO YES YES YES (rare) NO NO YES YES YES Biology EOC Review Label the following stages of mitosis (cell division). Put the letters in order starting with interphase. C, B, E, A, D What type of cell is this Plant or animal and how do you know? Plant- rigid square structure because of cell wall 3.03 Interpret and predict patterns of inheritance: (dominant, recessive and intermediate traits, multiple alleles, polygenic traits, sex-linked traits, independent assortment, test cross, pedigrees, and Punnett squares) 1. In the Punnett square to the left, T = tall and t=short. Give the genotype for the parents. p. 263-274 Tt 2. Give the phenotype for the parents. Tall 3. What are the genotypes and phenotypes of the offspring? TT – tall, Tt – tall, tt - short 4. What is the genotypic ratio of the offspring? 1 TT: 2 Tt: 1 tt 5. What is the phenotypic ratio of the offspring? 3 Tall: 1 short 6. What environmental factors might affect the expression of these genes for height? Explain. Nutrition, exercise, disease 7. Some genes produce intermediate phenotypes. Cross a pure breeding red flower (RR) with a pure breeding white flower (WW). Give the genotypes and phenotypes of the offspring. p. 272-273 RR x WW = 100% RW Red parent crosses with white parent gives all pink offspring. Explain the inheritance of the following disorders: p. 341-346 (autosomal dominant? Autosomal recessive? Sex-linked dominant? Sex-linked recessive?) Sickle cell anemia: Autosomal recessive Color-blindness: Sex-linked recessive Cystic fibrosis: Autosomal recessive Huntington Disease: Autosomal dominant Hemophilia: Sex-linked recessive PKU: Autosomal recessive Biology EOC Review Blood type p. 344-345 1. If a woman with type A blood has a child with a man with type B blood and their first child has type O blood, give the genotypes of the woman and the man and do the cross. (Alleles are IA, IB, and i) Parents are IAi and IBi because that is the only way to get an ii child (type O) 2. What are the odds that they will have a child with type O blood again? 25% 3. What are the odds that they will have a child with homozygous type A blood? 0% Their children will be IAIB, IAi, IBi, and ii 4. What are the odds that they will have a child with type AB blood? 25% 5. A blood test is done to see if one of three men is the father of a child. The child has type O blood, the mother has type A blood. Man #1 has type AB blood, Man #2 has type A blood, Man #3 has type O blood. Are there any men that can be ruled out as the father. Explain. Man #1 is ruled out; child needs to get “O” from each parent. Polygenic traits p. 395-396 1. Some traits are considered to be polygenic. What does this mean? Traits that are controlled by more than one gene. 2. What is an example of a polygenic trait in humans? Eye color, height, weight, hair and skin color Sex Chromosomes p. 341-342, 350--352 1. What are the male sex chromosomes in humans? XY 2. What are the female sex chromosomes in humans? XX 3. Colorblindness and hemophilia are sex-linked traits. What chromosome are these genes found on? X 4. What are the 3 possible female genotypes? __XHXH__ __ XHXh __ __ XhXh __ Phenotypes _normal _ 5. What are the 2 possible male genotypes? __XHY__ Phenotypes? _normal_ _carrier_ _disease_ __ XhY __ _disease_ 6. Cross a female who is a carrier for hemophilia with a normal male. XHXh x XHY 7. What are the odds that they will have a child with hemophilia. 25% 8. What are the odds that they will have a daughter with hemophilia? 0% 9. What are the odds that they will have a daughter who is a carrier for hemophilia? 25% 10. Why are males more likely to show a sex-linked disorder? They only need to get the disorder allele from their mother not from both parents. Biology EOC Review Karyotype p. 341, 352-353 1. What is the gender of the person whose karyotype is shown to the left? female 2. What is the disorder that this person has? What is your evidence? Trisomy 21 (Down Syndrome); there are 3 # 21 chromosomes 3. What are some of the characteristics of this disorder? Mental retardation; shorter stature; simian palm crease; low set ears; thick tongue; some heart defects sometimes. 1. What caused this type of disorder? Nondisjunction during meiosis Pedigrees p. 342-343 1. Is the inheritance pattern shown by this pedigree dominant or recessive? Autosomal recessive 2. How do you know? Both males and females; parents don’t have it; kids do. 3. Using A,a, what is the genotype of person II 4. aa 4. What is the genotype of person I 3? Aa Test Cross p. 263-280 Describe the test cross that a farmer would use to determine the genotype of an animal that shows a dominant trait. Use the following Punnett squares and the letters A and a to explain your answer. Cross the animal with a recessive; If the animal is Aa crossed with aa – then ½ of the offspring will be recessive; If the animal is AA crossed with aa – all offspring will show the dominant trait. Mendel’s Laws p. 263-280 Explain each of Mendel’s Laws and explain the experiments he used to determine these laws. 1. Law of segregation of characters (alleles) In meiosis the two alleles separate so that each gamete receives only one form of the gene. 2. Law of independent assortment (of alleles) Each trait is inherited separately from the other traits (chance). 3. How does meiosis lead to segregation and independent assortment? Segregation and ind. assortment happen during meiosis, during the creation of the gametes. Biology EOC Review 4. A problem to solve: In the P1 generation a homozygous dominant brown mink crossed with a homozygous recessive silverblue mink produced all brown heterozygous offspring. When these F1 heterozygous minks were crossed among themselves they produced 47 brown animals and 15 silverblue animals (F2 generation). Determine all the genotypes and phenotypes, and their relative ratios, in the F1 and F2 generations. B = Brown; b = silverblue Parents of F1 are BB and bb. Offspring are Bb – all brown Parents of F2 are Bb and Bb – offspring are ¼ BB, 2/4 Bb, and ¼ bb – or 3 brown to 1 silverblue 3.04 Assess the impacts of genomics on individuals and society (Human genome project and applications of biotechnology) 1. What were the goals of the human genome project? p. 357- 358 To sequence the entire human genome; map genes to their chromosomes and determine their traits. 2. What are 2 scientific uses of the human genome project? p. 357-360 To determine if individuals carry genes for genetic conditions and to develop gene therapy. To the left is an electrophoresis gel, showing evidence from a rape case. p. 322- 326, 356-357 3. Could the defendant be the rapist? Explain your answer. No – the bands do not match the male DNA found in the vagina. 4. Which fragments of DNA are the longest? Explain. The fragments that are closest to the source or top. Smaller fragments can travel quicker through the gel. 5. What other ways can DNA fingerprinting be useful? Forensics, species relatedness, paternity Biology EOC Review Transgenic organisms: p. 327-332 1. What are transgenic organisms? Organisms whose DNA contains genes from other species (contain foreign DNA). 2. What is the value of this technology in agriculture? To have plants produce their own pesticide; produce better yield food crops; to produce larger livestock more quickly 3. What is the value of this type of technology in the pharmaceutical industry? Pure human proteins can be produced in mass and relatively cheaply. Pure insulin – so much better for person than horse or pig.