Page 1 of 17 draft-full-paper-SA-RSC-FD177.doc Induced fields at proton sites from magnetic dipole model; relating values to absolute NMR shifts and referenced chemical shifts. Sankarampadi Aravamudhan Department of Chemistry North Eastern Hill University Shillong 793003 Meghalaya saravamudhan@hotmail.com Currently the ab initio quantum mechanical calculations can yield, as a matter of routine, Absolute NMR shift values in molecules. Absolute shifts are essentially the electronic shielding values for nuclei measured by the shift in the NMR resonance with respect to the bare nucleus. When a magnetic dipole model is used for calculating the intra molecular shielding at a proton, the induced secondary fields at the proton site, due to electron circulations in the neighborhood is calculated. Since point dipole approximation becomes inapplicable at closer proximities, the field induced at the proton site by electron circulations around proton cannot be calculated accurately. A summation method (instead of the well-known integration procedures to evaluate demagnetization factors) is now available currently. This summation procedure also could have a provision for improving the validity of the point dipole approximation at much closer distances. However, this method relies on the susceptibility tensor values of the functional group within which the proton is also located. Susceptibility tensor being the result of electron (charge cloud) circulations over the region of the functional group, the region, thus, includes also the charge cloud at the proton itself. The summation procedure, even though improves the validity of point dipole approximation, the uniform value of the (a matter of homogeneity) susceptibility tensor may not be a good approximation. Hence, placing a point dipole at the electrical centre of gravity within that functional group may result in inaccuracies in the calculated induced fields at the proton. When comparing the absolute shift values with the corresponding shifts calculated entirely from magnetic dipole model the inaccuracies may result in discrepancies.. This, can be considered as a situation indicating the necessity for a method (link/slide-18) yet to be evolved) for chemical shift referencing when intra molecular proton shielding is calculated by magnetic dipole model. The electron charge clouds in the molecules undergo changes in their circulations when an external magnetic field is present. The changes in the induced fields, thus arising due to the external fields give rise to the different peak positions for the corresponding nucleus within the molecule. Such differences in peak positions are measured from the NMR peak of a reference compound, which are the experimentally measured chemical shifts. When the differences in peak positions are measured from the resonance peak of bare nucleus (not from the resonance line reference chemical compound), such values are referred to as the absolute shielding constants. Shielding and chemical shifts are expressed in units of “parts per million”- ppm. The Shielding constants can thus be obtained from experimental NMR spectrum, or by a suitable ab initio computational quantum chemical method. There are differences encountered between the experimentally measured quantities (experimental artifacts) and the theoretical abinitio calculation results (approximations in the methods). It so happens that the theoretical values have to be subjected to a scaling which results in a better comparison with the experiment. Such procedures remain, as unsatisfactory approaches only, and the effort to improve the situations are encountered with arbitrariness at some stage or other without convincing. Page 2 of 17 draft-full-paper-SA-RSC-FD177.doc The induced fields from electron circulations much far away from the location of the Nucleus, can be subjected to a classical magnetic dipole model for evaluating the shielding values. However applying such classical methods of calculations for electronic charge clouds at the nucleus would not be possible because the point dipole approximation required for the magnetic dipole model may not be upheld as a valid approximation. Hence, such calculations must use ab initio quantum chemical calculations. In general, when the data on magnetic susceptibility are available for any specific electron charge circulation at a location, correspondingly a magnetic dipole moment can be calculated that would be generated due to the presence of an external magnetic field. This dipole can be placed at the electrical centre of gravity, or at the geometrical center of gravity depending on the symmetry prevailing over the charge cloud region. This point dipole can in turn generate secondary fields at nearby locations to enable a nearby magnetic dipole to interact. Considering the discussions on the “Theory of Chemical Shifts1”, it is significant to note that for the interpretation of chemical shifts, the theory can be developed in terms of an atomic breakdown of diamagnetic currents. The total screening constant for atom A is then written as in equation-1 as follows with the interpretation of the various terms being given below. A = dAA + pAA + B(A) AB + A, ring ---- Equation-1 (1) dAA is the contribution to the secondary magnetic field at nucleus A due to the diamagnetic Langevin-type currents on the atom A itself, which give the corresponding susceptibility term dA (2) pAA is the contribution due to the paramagnetic-type currents on atom A which give the susceptibility term pAA. (3) AB is the contribution to the screening of atom A by the atomic circulations on atom B2. (4) A, ring is the contribution to the screening due to the ring currents1 which cannot be localized by any atom. Thus, it is possible to envisage a break up of molecular susceptibility values in terms of susceptibilities for each atom. An effort was earlier3 made to obtain intra molecular shielding values for proton in benzene by composing a set of break up values (as was available in earlier works of several authors in different contexts) with the criterion that such a composed break up values should add up to the total molecular susceptibility value by appropriate summing. The significance of the term 3 in equation 1 has been emphasized1, 2, 4 by earlier authors and several authors more recently, on the interpretation of NMR results. It is to be emphasized at the outset, that the calculation of shielding constants has been using the classical magnetic-dipole model (using susceptibility values) mainly for distant contributions to Shielding; at such distances, that the immediate surroundings of the nucleus do not have much electron charge overlaps with the region from where the shielding contribution arises. In a much familiar terms, intermolecular nature for the charge cloud (relevant orbital) overlap, and use of such classical model was unthinkable for distances close to bond-lengths within molecule, mainly because of the criteria for the validity of point dipole approximation. Page 3 of 17 draft-full-paper-SA-RSC-FD177.doc However, it has been possible recently to evolve a method to calculate induced fields within the magnetized material, the demagnetization factors, based on classical magnetic dipole model5. This inherently had the advantage that the point dipole model can become valid at much closer proximities to the charge circulation region than it was possible before. In addition, the method seemed to have no limitation for the validity of point dipole approximation2. This advantage is based on the fact it was possible to choose any distance in absolute measure by appropriate fragmentation. It is conditionally necessary to maintain an appropriate ratio (about 0.2-0.1) for the dimensions of the fragmented region of charge cloud circulation (in terms of a diameter of a spherical volume) to the distance of location the induced fields due to this circulation are calculated. r R FIG. 1 r = radius of charge circulation = > 0.2 R = distance of Nucleus from Dipole moment FIG.1. Region of charge cloud, the current circulation and the location of nucleus where the induced field is to be calculated When the susceptibility is isotropic in region i, the following equation would be applicable: ------ Equation-2 The corresponding Tensor form of the Equation is: ---- Equation-3 From the schematic diagram FIG.2 below, it can be discerned that the Calculations using point dipole model (if the intra molecular Shielding can be calculated) would become an alternate, independent method to calculate the shielding constant, depending on the theoretical methods of evaluation and experimental determination of Susceptibility values. If it is possible to compare the results from all the three routes, by a mutual inference from one method for the other, it may be possible to arrive at a consistent set of Susceptibility values, and a theoretical formalism with much less need for arbitrary scaling. Calculation of the intra molecular shielding would require considering the molecule as a complete set of convenient fragments3. Each fragment must have a justifiable susceptibility tensor in such a way, that the total molecular susceptibility tensor1, 6, 7 can be obtained by the permissible addition of the fragment tensor values. Each fragment tensor would be characterized by the principal axis directions in conformity with the local disposition of the symmetry elements if any. Thus, the principal axis system [PAS] for all the fragment would not be the same, and each one of such PAS would have well specified direction cosines with respect to the Molecular Principal Axis System. Transformations from the local principal axis system (for the fragment) to the molecular PAS would be necessary to add all the tensor elements, without inconsistencies, to obtain the molecular tensor values. Page 4 of 17 draft-full-paper-SA-RSC-FD177.doc Absolute Shielding Values Experimentally measured values Theoretical Values by QM calculations Calculations using Magnetic Point-Dipole model. Magnetic Susceptibility data for molecules, functional groups, bonded regions & atoms FIG 2 The over view of the different methods of calculating (induced fields) Shielding Constant Categorizing them from the point of view of Experimental and Theoretical approaches Contribution to the proton shielding from each fragment can be calculated, and proper transformation properties must be ensured to get the total shielding contribution. a c b FIG 3 (a) Structure of typical organic molecule (b) Indicating and demarcating the Charge clouds on atoms and bonded regions and the extent of charge delocalization (c) The local charge circulations possible within a demarcated region as a appropriate fragment, and the contribution (calculable from equation-3) to shielding at one of the protons. Once a complete set of molecular fragments are identified, then the task is to find appropriate susceptibility tensor values, which can be attributed to the fragments. Sometimes it would be possible to arrive at a consensus on the tensor element values gathered from several different sources, and succeed in calculating the intra molecular proton shielding in the molecules as above ( in Fig.3 ). Page 5 of 17 draft-full-paper-SA-RSC-FD177.doc However, justifying the values of the susceptibility tensors used could prove to be intriguing, in the sense that for one reason it may be justifiable and for a different reasons it may not be so easily convincing. It is probably this aspect that could be an aid in trying to find out the more about the requirement of having to scale the shielding values obtained by QM theoretical calculations. In this particular work, the above considerations would be further illustrated by actually calculating the intra molecular shielding contribution to protons in benzene. A complete set of 25 fragments of Benzene molecule could be realized, such that with their susceptibility tensors in Local PAS, a total Molecular Tensor value can result by summing them in the molecular reference frame. Having the fragmented tensors (Fig.4 and Fig.5) and the total tensor (Fig.6), well disposed with their respective principal directions, in the Benzene molecule, the task of ascertaining the validity of point dipole approximation for evaluating the contribution from the fragments leads to the following initial settings: 1. For all the 24 tensor fragments (Fig.) of the 25, the point dipole approximation would have a reasonable validity with the exception being that C-H () contribution of the bond to which the Proton is attached. which may be designated as the Proton 12? This disposition and standpoint for the exception can be visualized as depicted in the following figure (Fig.7). It becomes evident that the contribution of the 24 tensors (Fig.8) can be calculated by placing a magnetic dipole moment at the centre of the respective region. On the other hand, for proton 12, the contribution from the corresponding C-H bulk susceptibility has to be calculated by considering the volume of charge cloud region for the C-H (). It may appear that the proton 12 is well within the charge cloud of the C-H bond. Therefore, the calculation is carried out by subdividing this C-H volume into smaller volume elements, and then summing up the contributions from the smaller volume elements to make up the contribution of the total of charges responsible (Fig.8) FIG. 4 Each one of the fragmented Tensor value can be used with Equation-3 to result in a shielding value at Proton 1, and the resultant total shielding tensor can be obtained. Thus obtained Total Shielding tensor can be diagonalised, and the trace can be calculated when the result would be an absolute shielding for proton 1 corresponding to the experimentally obtainable HR NMR benzene peak value, referenced to TMS becomes the Benzene proton chemical shift. In FIG-6, the results are displayed and taking into consideration the required justification for the fragmented susceptibility values, the intra molecular shielding by this model seems to have resulted in reasonably comparable values. In particular, the value of 7.4 ppm is more appealing. Subdividing the region into smaller volume elements and summing up the contributions to shielding from the subdivided volume elements, that is Page 6 of 17 draft-full-paper-SA-RSC-FD177.doc the summation procedure, even though improves the validity of point dipole approximation, the FIG 5a Page 7 of 17 draft-full-paper-SA-RSC-FD177.doc uniform value of the (a matter of homogeneity) susceptibility tensor may not be a good approximation. Hence, placing a point dipole at the electrical centre of gravity within that functional group may result in inaccuracies in the calculated induced fields at the proton (Fig. 8). When comparing the absolute shift values with the corresponding shifts calculated entirely from magnetic dipole model the inaccuracies may result in discrepancies.. This situation can be considered as an indication of a necessity for evolving method for chemical shift referencing when intra molecular proton shielding is calculated by magnetic dipole model. FIG 5b The actuality is a variation in the charge cloud distribution. The carbon core-electron-cloud has been taken into consideration in the C atom local susceptibility (one of the25 fragments). For the remaining part of the region, there is a single susceptibility tensor assigned and for practical reasons further fragmentation of the C-H region does not seem worth the while. On the other hand, the region of C-H bond itself is only about 4 Aº 3 in volume within which the variation (charge cloud gradient) not insignificant. Hence even while subdividing this volume into smaller volume elements, cannot have susceptibility values proportional to the volume of the smaller volume elements that is implicit in the procedure adapted for C-H region contribution at the H atom. This induced field thus calculated would not lead to the Absolute shielding values to the required level accuracy and confidence. Page 8 of 17 draft-full-paper-SA-RSC-FD177.doc FIG 6 FIG 7: Fragments indicated by the possible shape of the charge distribution demarcating each fragment from the neighboring one. The shapes relevant for the and π are depicted. Page 9 of 17 draft-full-paper-SA-RSC-FD177.doc Image-01 Page 10 of 17 draft-full-paper-SA-RSC-FD177.doc FIG 8. FIG 9. Page 11 of 17 draft-full-paper-SA-RSC-FD177.doc Each one of the fragmented Tensor value can be used with Equation-2 to result in a shielding value at Proton 1, and the resultant total shielding tensor can be obtained. Thus obtained Total Shielding tensor can be diagonalised, and the trace can be calculated when the result would be an absolute shielding for proton 1 corresponding to the experimentally obtainable HR NMR benzene peak value, referenced to TMS becomes the Benzene proton chemical shift. In FIG-6, the results are displayed and taking into consideration the required justification for the fragmented susceptibility values, the intra molecular shielding by this model seems to have resulted in reasonably comparable values. In particular, the value of 7.4 ppm is more appealing. Subdividing the region into smaller volume elements and summing up the contributions to shielding from the subdivided volume elements, that is the summation procedure, even though improves the validity of point dipole approximation, the uniform value of the (a matter of homogeneity) susceptibility tensor may not be a good approximation. Hence, placing a point dipole at the electrical centre of gravity within that functional group may result in inaccuracies in the calculated induced fields at the proton (Fig. 8). When comparing the absolute shift values with the corresponding shifts calculated entirely from magnetic dipole model the inaccuracies may result in discrepancies.. This situation can be considered as an indication of a necessity for evolving method for chemical shift referencing when intra molecular proton shielding is calculated by magnetic dipole model. FIG 10 a. Homogeneous charge cloud distribution can result in a Susceptibility is a homogeneous in the region. The actuality is a variation in the charge cloud distribution. The carbon core-electron-cloud has been taken into consideration in the C atom local susceptibility (one of the25 fragments). For the remaining part of the region, there is a single susceptibility tensor assigned and for practical reasons further fragmentation of the C-H region does not seem worth the while. On the other hand, the region of C-H bond itself is only about 4 Aº 3 in volume within which the variation (charge cloud gradient) not insignificant. Hence even while subdividing this volume into smaller volume elements; the smaller elements cannot have susceptibility values proportional to the volume of the elements that is implicit in the procedure adapted for C-H region contribution at the H atom. This induced field thus calculated would not lead to the Absolute shielding values to the required level accuracy and confidence. Locally on the hydrogen atom, besides the participation of the electron in the C-H bonding, a part of the electron would remain as the core Hydrogen atom charge cloud. Hence, the contribution from this core should be calculated as the induced field due to the H atom local diamagnetic susceptibitity and should be added to the induced field obtained by magnetic dipole approximation for the C-H region. When the C-h bond is placed farther from the H atom at which Shielding is calculated, then, a point dipole placed at the center of the region seems a reasonable for obtaining the shielding values at distant protons. As it is it seems that the value of the C-H fragment used must be subjected much closer examination of the regional variation of the charge densities, when it is a question of calculating the C-H region contribution to the H atom bonded to that carbon. The current state of this calculation8 as described above is summarized in the following Fig 9 & 12. Page 12 of 17 draft-full-paper-SA-RSC-FD177.doc FIG 10 b. C H Page 13 of 17 draft-full-paper-SA-RSC-FD177.doc FIG 12 Image-02 Page 14 of 17 draft-full-paper-SA-RSC-FD177.doc From image-02 above and Fig-12 it would be possible to make an assessment of the Shielding trends and the Electron Densities for varying distance between the Hydrogen atoms. Image-02a Image-02b Page 15 of 17 draft-full-paper-SA-RSC-FD177.doc 6 Valence Electrons 1 Valence Electron H H C In Benzene Molecule (By semi empirical QM) on H atom partial charge is + 0.1926 (electrons belonging Hydrogen atom= 0.8074) In Benzene Molecule (By semi empirical QM) on C atom partial charge is -0.1926 (6.1926 electrons belong to C atom) H C FIG 13 While forming benzene molecule 0.1926 electrons from H atom has been transferred to C atom. These number of electrons values relate to point electron charges. Charge density maps on basis of charge cloud / orbital overlap basis would yield a picture somewhat similar to the description below. Contrasting complementary colors chosen for partial charges of opposite sign. H C FIG.14 Page 16 of 17 draft-full-paper-SA-RSC-FD177.doc Image-04 Page 17 of 17 draft-full-paper-SA-RSC-FD177.doc References: 1. The theory of Chemical Shifts, J.A.Pople, Discussions of the Faraday Society, Vol.34, page-7, I-NUCLEAR MAGNETIC RESONANCEIN DIAMAGNETIC MATERIALS (1962). Theory of the Chemical Shift in Aromatic Heterocycles, G.G. Hall, A.Hardisson, and L.M.Jackman, Disc. Farad. Soc., Vol.34, page-15, (1962). 2. Pople, Proc. Roy. Soc. A, Vol.239, p-550 (1957). McConnel, J. Chem. Physics, Vol. 27, p-226 (1957), http://www.ugc-inno-nehu.com/UH_PMR_Biphenyl_ExptThery.pdf 3. http://saravamudhan.tripod.com/id2.html http://aravamudhan-s.ucoz.com/amudhan20012000/ismar_ca98.html 4, “Nuclear Magnetic Resonance Spectroscopy”, by F.A.Bovey, Academic Press 1969. 5. http://nehuacin.tripod.com/pre_euromar_compilation/index.html http://www.ugc-inno-nehu.com/isc2009nehu.html http://ugc-inno-nehu.com/ISC2014/ISC2014-abstract-fullpaper-SA.doc http://www.ugc-inno-nehu.com/cmdays2011/0_3_16Aug2011.ppt http://www.ugc-inno-nehu.com/rscfd177/rcma2005-fp.pdf 6. P.W.Selwood, Magnetochemistry, Interscience Publishers, New York, 1943 7. W.H. Flygare, Chemical Reviews, Vol.74, p-682 (1974) 8. http://www.ugc-inno-nehu.com/rscfd177/draft-full-paper-SA-RSC-FD177.doc