Progress Report Ceratomyxa impacts on upper Klamath River salmon Project Dates: October 10, 2008 - June 30, 2009 Submitted to: Oregon Department of Fish and Wildlife Submitted by: Jerri Bartholomew and Charlene Hurst Department of Microbiology Oregon State University Corvallis, Oregon 97331-3804 Project Summary Severe infections by Ceratomyxa shasta have caused high mortality in migrating juvenile salmon in the lower Klamath River during the past decade. These effects are most evident in the river below Iron Gate Dam, and current research suggests strategies for reducing disease effects. However, levels of C. shasta detected in the Williamson River, upper Klamath basin, are even higher. Defining the parasite’s distribution, the fish that support it’s lifecycle and the conditions that result in this highly infectious area are critical to making decisions that will reduce disease effects basin-wide and allow successful reintroduction of salmon into the upper basin. Project Objectives Objective 1. Ceratomyxa shasta distribution and abundance. WMR sampling: Water sampling and processing was conducted as described by Hallett and Bartholomew (2006). Briefly, at 22 sites, 4 x 1 L samples of water were collected, filtered and the filter was processed for testing using a molecular assay that provides a measure of parasite density for each sample. Sample sites were selected based on accessibility and GPS coordinates, and site descriptions were recorded. Data from water samples collected in September 2008 show that areas with the highest C. shasta densities are between the mouth of the Williamson River and Rkm 11.4, and above the confluence of Spring Creek at Rkm 33. Use of a standard curve in the assay allows for estimation of parasite concentration. Values from these sites indicate approximately 10-100 parasite spores/L (figure 4a and b). Slightly lower parasite densities (1-10 spores/L) were detected from samples collected from Rkm 15 to 20, just below the Figure 1: WMR with sampling sites confluence of the Sprague River. The parasite is absent from both the Spring Creek and Sprague River tributaries (<1 spore/L). Parasite distribution in September suggests that polychaete populations exist above Rkm 33, where the second peak in parasite concentration occurred, allowing for the completion of the parasite’s life cycle. The data also suggests that the Sprague River and Spring Creek may not contribute to parasite levels in the WMR as less than 1 spore/L was detected at these sampling locations. A decrease in parasite concentrations occurred below Spring Creek confluence, possibly as a result of a dilution effect from the mixing of Spring Creek with the WMR. Where the Sprague joins with the WMR at Rkm 20, no decline was observed, and in fact, parasite concentration increases after this point. 2a 2b Figures 2a and b: (2a) Cycle threshold values (Ct) for qPCR analysis of water samples collected from the WMR. The values from three liters of river water from each site were averaged together to obtain the value displayed on the graph. The lower Ct values indicate higher concentrations of parasite DNA. (2b) A summary figure of the distribution and abundance of C. shasta along the WMR from data collected September 2008. 2 Interpretation of results: Data collected during September 2008 provides baseline data for this system. To determine if the high levels above the Sprague River are a result of myxospore input from spawning fish, or actinospore release from polychaetes, we need to repeat sampling at these sites during early summer when actinospore release should predominate. Further research should help pinpoint the source(s) of parasites into the system. Objective 2. Parasite effects on Chinook salmon To establish polychaete populations for parasite challenge studies, worms were collected from the mouth of Klamath Lake in September 2008. Polychaetes were divided between six tanks and densities were estimated in an effort to monitor worm survival through the course of the experiment In each of 2 replicate tanks, polychaetes were dosed with myxospores isolated from either Chinook salmon infected in the lower basin (genotype I) or susceptible rainbow trout infected in the upper basin (genotype II). The targeted dose was approximately 1,000 spores/worm. Another pair of tanks was not seeded and designated as controls Actinospore release was monitored by collecting and filtering water from each tank on a biweekly basis starting October 9, 2008. Susceptible strain rainbow trout and Klamath River Chinook salmon were added to tanks on the outflow of the paired polychaete tanks Figure 3: Tank set-up for laboratory (Fig 3) as soon as a distinct peak indicated the experiments. Polychaete tanks on release of actinospores from the water sample data. the top rack and fish tanks on the bottom. Fish are fed daily and monitored for signs of disease. Preliminary Results and Interpretation: Rainbow trout have succumbed to infection in tanks receiving effluent from polychaetes seeded with genotype II. Rainbow trout also appear to have become infected in tanks receiving effluent from the unseeded control polychaetes. This is not completely unexpected, as some polychaetes collected from the wild would be naturally infected (presumably with either genotype 0 or II, which have been detected in the Williamson). However, rainbow trout have also become infected in the tanks seeded with genotype I. This could either be a result of the background level of infection, or they may also be susceptible to this genotype. This study is continuing and genetic analysis of the samples should resolve these questions. 3