PSYC 3102: Introduction to Behavioral Genetics Lecture 12 XYY syndrome continued: Witkin in Denmark examined Danish army enlistment Small country, no federal vs. state governments Compulsory draft into state service for all men Series of tests then placed in Army or other state service for a few years Provided a large cohort of males Incoming draftees were all karyotyped Only 12 XYY cases found 5 out of those 12 (~42%) ended up having criminal records compared to base rate of ~12% Significant difference However, crimes were largely petty offenses (shoplifting, etc.), not violent or sexual crimes The picture that emerges: o These individuals tend to suffer from some learning disabilities, higher rate than average, but not severe o THIS is a predicting factor of delinquency, generally petty crimes Conclusion: No predisposition for aggression or violence, but predisposed to learning problems, which in turn, increases risk of getting into trouble with the law 2 Major Myths: 1. Hyper-masculined sexual psychopaths due to increased male hormones (hypertestosteronized) 2. Perfectly normal “there is NO association with criminal records” Microdeletion Small section of chromosomal material is missing (thousands to hundreds of thousands of nucleotides, 5-6 genes) Prader-Willi Syndrome & Angelman’s Syndrome are examples of microdeletions Microduplication Areas get duplicated Genetic Technology Can’t go into great detail—it is its own course Taking a very simplistic view Most important in modern genetics-- Ability to identify polymorphism Polymorphic gene = more than one common allele Huntington’s Disease Discovered in 1870s-1880s Later realized it is a dominant gene Identify the gene to find out the protein it codes for, find treatment or interventions Start with linkage analyses to find the general area Problem—not enough marker genes (genes that are known and mapped) 1980s—better techniques to detect polymorphism and place their location For 75 years nothing panned out in HD research But in 1984 there was the first report of general linkage Electrophoresis Purpose: Separate molecules by molecular size Start with gel (viscous material) Insert a series of molecules Run current Molecule with certain electric charges will move to one end of gel Size makes them faster or slower in moving through the gel Need to dye molecules in order to see them Probes are single stranded sections of DNA or RNA that binds to the DNA (complimentary( that carries a “light bulb” Fluorescent dyes are mainly used now, but radioactive labels used to be used more commonly Used for proteins, DNA RFLP Restriction Fragment Length Polymorphism A method of finding and detecting polymorphisms Identifies alleles at restriction sites where restriction enzymes cut Restriction Enzyme: An enzyme that recognizes a specific nucleotide sequence, then cuts at the DNA at that sequence Ex: EcoRI recognizes a certain sequence and cuts the DNA in to 2 fragments For example… can be used in forensic and paternity cases (really today they use more precise tests, this is one of the first methods) EcoRI enzyme cuts at a specific sequence 2 individuals: enzyme may cut different fragments (or may not cut one at all) After cut up, do electrophoresis and then bathe in the probe Results: Smith / Jones / Perp or Pappa Results: Jones didn’t do it/isn’t the father; NOT that Smith did do it/is the father!! Need to keep testing more and more genes until you get acceptable probabilities that it is a match Other tools: Polymerase Chain Reaction (PCR) Purpose is to “amplify” DNA = make a large # of copies of a desired section of DNA Ex. make lots of copies of a single gene Advantages: can do a lot of genotyping from a small amount of sample (used to take white blood cells and make a cell culture, now can get a buccal sample from the cells in the mouth) Pre-Processing Steps: 1. Purify DNA from the cell 2. Cut up long strands of DNA into more manageable pieces (with restriction enzymes) Major Steps for PCR: 1. Heat it – denature double-stranded DNA into single-stranded DNA + 2. Add primers – small section of single stranded DNA that will bind to the strands primers 3. Add replication material – enzymes that will replicate DNA (polymerase) and free nucleotides now have 2 copies of DNA doubled the amount of DNA Repeat steps 1-3 to make more & more copies After ~20 cycles, you magnify the gene of interest ~100,000 fold Signal for the one gene will overpower the other genes in the sample, then you can SEQUENCE Types of Polymorphisms 1. Protein / enzyme variations 2. RFLP 3. Tandem Repeat polymorphisms – simple, different number of repeats (think of DNA stuttering), sequence can be as short as 2 nucleotides or as long as ~44 nucleotides 4. SNP – single nucleotide polymorphisms consist of variations in only one nucleotide Increased number of known polymorphisms help in gene detection Can test for polymorphic phenotypes Example: In the serotonin receptor 1A gene there is a SNP (A to G) which gives a different amino acid in that position, which will cause the protein product to fold slightly differently Serotonin is believed to be involved in depression So… Compare depressives to controls Example 2: Polymorphism in the serotonin transporter gene doesn’t make a different transporter It is a tandem repeat in the promoter region (4-11 repeats of a 44 nucleotide sequence) It is thought to influence the rate of transcription So… Genotype and compare people Take home points: Not important to know nitty-gritty details Don’t need to explain PCR or show RFLP But KNOW DEFINITIONS Read text regarding sequencing, but don’t need to know details