Supplementary Information
DNA Sequence of both chromosomes of the cholerae pathogen Vibrio cholerae
John F. Heidelberg*, Jonathan A. Eisen*, William C. Nelson*, Rebecca A. Clayton, Michelle L. Gwinn*, Robert
J. Dodson*, Daniel H. Haft*, Erin K. Hickey*, Jeremy D. Peterson*, Lowell Umayam*, Steven R. Gill*, Karen E.
Nelson, * Timothy D. Read*, Hervé Tettelin*, Delwood Richardson*, Maria D. Ermolaeva*, Jessica
Vamathevan*, Steven Bass*, Haiying Qin*, Iona Dragoi*, Patrick Sellers*, Lisa McDonald*, Teresa Utterback*,
Robert D. Fleishmann*, William C. Nierman*, Owen White*, Steven L. Salzberg*, Hamilton O. Smith*††, Rita
R. Colwell†, John J. Mekalanos‡, J. Craig Venter*††, Claire M. Fraser*.
*
The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA
†
Center of Marine Biotechnology, University of Maryland Biotechnology Institute, 701 East Pratt St.,
Baltamore, MD 21202, USA and Department of Cell and Molecular Biology, University of Maryland, College
Park, MD 20742, USA
‡
Harvard Medical School, Department of Microbiology and Molecular Genetics, 200 Longwood Ave, Boston,
MA 02115, USA
††
Current Address: Celera Genomics, 45 West Gude Drive, Rockville, MD 20850, USA
Table of contents
Fig. S1 Phylogenetic tree of Transketolase 1 (tktA) homologs
Fig. S2 Phylogenetic tree of serine hydroxymethyltransferase (glyA) homologs
Fig. S3 Phylogenetic tree of ParA homologs
Table S1. Identification of Vibrio cholerae El Tor N16961 genes
Fig. S1. Phylogenetic tree of Transketolase 1 (tktA) homologs. The tree shows the genes of the V. cholerae tktA
from the large chromosome and the small chromosome group together, suggesting a recent duplication.
Homologs of tktA were identified by BLASTP and PSI-BLAST searches of the NCBI nr database and the TIGR
unfinished genomes (http://www.tigr.org). Amino-acid sequences of the proteins were aligned using
CLUSTALW and a neighbor-joining phylogenetic tree was generated from the alignment using the Phylip
program (using the PAM based distance calculation). Hypervariable regions of the alignment and positions with
gaps in many of the sequences were excluded from the analysis. * Preliminary data from unfinished TIGR
genome. Abbreviations: AQUAE, Aquifex aeolicus; SYNSP, Synechococcus sp.; ENTFA, Enterococcus
faecalis; BACSU, Bacillus subunittilis; DEIRA, Deinococcus radiodurans; HELPY, Helicobacter pylori;
MYCGE, Mycoplasma genitalium; MYCPN, Mycoplasma pneumoniae; CHLTE, Chlorobium tepidum;
TREPA, Treponema pallidum; RHOCA, Rhodopseudomonas capsulata; NEIME, Neisseria meningitidis;
SHEPU, Shewanella putrefaciens; VIBCH, Vibrio cholerae; ECOLI, Escherichia coli; HAEIN, Haemophilus
influenzae.
Fig. S2. Phylogenetic tree of serine hydroxymethyltransferase (glyA) homologs. The tree shows the genes of V.
cholerae glyA from the large chromosome and the small chromosome group apart, suggesting that one of these
two genes was acquired. Homologs of glyA were identified by BLASTP and PSI-BLAST searches of the NCBI
nr database and the TIGR unfinished genomes (http://www.tigr.org). Amino-acid sequences of the proteins
were aligned using CLUSTALW and a neighbor-joining phylogenetic tree was generated from the alignment
using the Phylip program (using the PAM based distance calculation). Hypervariable regions of the alignment
and positions with gaps in many of the sequences were excluded from the analysis. Tree. * Preliminary data
from unfinished TIGR genome. Abbreviations: MYCGE, Mycoplasma genitalium; MYCPN, Mycoplasma
pneumoniae; BORBU, Borrelia burgdorferi; HELPY, Helicobacter pylori; CAMJE, Campylobacter jejuni;
RICPR, Rickettsia prowazekii; METEX, Methylobacterium extorquens; BRAJA, Bradyrhizobium japonicum;
HYPME, Hyphomicrobium methylovorum; VIBCH, Vibrio cholerae; SYNSP, Synechococcus sp.; ENTFA,
Enterococcus faecalis; STRPN, Streptococcus pneumoniae; STAAU, Staphylococcus aureus; BACSU, Bacillus
subunittilis; NEIGO, Neisseria gonorrhoeae; NEIME, Neisseria meningitidis; ACTAC, Actinobacillus
actinomycetemcomitans; HAEIN Haemophilus influenzae; ACIRA, Acinetobacter radioresistens; SHEPU,
Shewanella putrefaciens; SALTY, Salmonella typhimurium; ECOLI, Escherichia coli; CHLTR, Chlamydia
trachomatis; CHLPN, Chlamydia pneumoniae; STRCO, Streptomyces coelicolor; CORS1, Corynebacterium
sp.; MYCTU, Mycobacterium tuberculosis; MYCLE, Mycobacterium leprae; AQUAE, Aquifex aeolicus;
ARCFU, Archaeoglobus fulgidus; METJA, Methanococcus jannaschii; METTH, Methanobacterium
thermoautotrophicum; METTM, Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133).
Fig. S3. Phylogenetic tree of ParA homologs. The tree shows the grouping of the V. cholerae ParA from the
large chromosome with other chromosomal ParAs, and the grouping of the V. cholerae ParA from the small
chromosome with plasmid, phage, and megaplasmid ParAs, suggesting that the small chromosome may have
originated as a plasmid or megaplasmid. Homologs of ParA were identified by BLASTP and PSI-BLAST
searches of the NCBI nr database. Amino-acid sequences of the proteins were aligned using CLUSTALW and a
neighbor-joining phylogenetic tree was generated from the alignment using the Phylip program (using the PAM
based distance calculation). Hypervariable regions of the alignment and positions with gaps in many of the
sequences were excluded from the analysis. The V. cholerae ParA homologs are underlined. Proposed ParA
subunitfamilies are highlighted. Abbreviations: BORBU, Borrelia burgdorferi; PYRAB, Pyrococcus abyssi;
PYRHO, Pyrococcus horikoshii; METJA, Methanococcus jannaschii; ENTFA, Enterococcus faecalis; ECOLI,
Escherichia coli; PSEPU, Pseudomonas putida; PSEAE, Pseudomonas aeruginosa; VIBCH, Vibrio cholerae;
STRCO, Streptomyces coelicolor; MYCTU, Mycobacterium tuberculosis; MYCLE, Mycobacterium leprae;
DEIRA, Deinococcus radiodurans; TREPA, Treponema pallidum; BACSU, Bacillus subunittilis; RICPR,
Rickettsia prowazekii; CAUCR, Caulobacter crescentus; CORGL, Corynebacterium glutamicum; HELPY,
Helicobacter pylori; YERPE, Yersinia pestis; SALTY, Salmonella typhimurium; COXBU, Coxiella burnetii;
RHILE, Rhizobium leguminosarum; RHIET, Rhizobium etli; AGRRA, Agrobacterium rhizogenes; ARGTU,
Agrobacterium tumefaciens; RHISP, Rhizobium sp.; PSEFL, Pseudomonas fluorescens; BACAN, Bacillus
anthracis; CLOST, Clostridium sticklandii; HALSP, Halobacterium sp.; RHOER, Rhodococcus erythropolis;
MYCPN, Mycoplasma pneumoniae; MYCGE, Mycoplasma genitalium; LACLA, Lactococcus lactis; SYNSP,
Synechococcus sp.; CHLTR, Chlamydia trachomatis; CHLPS, Chlamydia psittaci; CHLPN, Chlamydia
pneumoniae
Table S1. Identification of Vibrio cholerae El Tor N16961 genes.
Gene identification numbers that correspond to those in Fig. 1 are listed here with the prefix VC (chrI) or VCA
(chrII) indicates the chromosome location followed by the commom name assigned to each protein. Each gene
identified is listed in its functional role category, adopted from 1.
VC0297
VC2628
VC1732
VC1172
VC1174
VC1173
VC0705
VC0696
VC2116
VC1171
VCA1036
VC1507
VC0695
VC0056
VC2629
VC1169
VC1170
VC2329
VC2685
VC0390
VC1704
(metE)
VC0991
VC1293
VC1977
VC2036
VC2107
VC2364
VC2684
VC0391
VC0547
VCA0822
VC1671
VC2683
VC0125
VC0126
VC2391
VC2157
VC2363
VC1611
VC2152
VC2362
VC2643
VC2618
VC2645
VC2641
VC2642
VC2273
VC2274
VC2376
VC2373
VC2377
VC2374
VC2746
VC2438
VC2644
VC2316
VC2239
VC2508
VC2262
VC0460
VC2490
VC2492
VC2493
VC2491
VC1590
Amino acid biosynthesis
Aromatic amino acid family
3-dehydroquinate dehydratase (aroQ)
3-dehydroquinate synthase (aroB)
3-phosphoshikimate 1-carboxyvinyltransferase (aroA)
anthranilate phosphoribosyltransferase (trpD)
anthranilate synthase component I (trpE)
anthranilate synthase component II (trpG)
chorismate mutase/prephenate dehydratase (pheA)
chorismate mutase/prephenate dehydrogenase (tyrA)
chorismate synthase (aroC)
indole-3-glycerol P synthase/phosphoribosylanthranilate isomerase (trpC/F)
phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (aroG)
phospho-2-dehydro-3-deoxyheptonate aldolase, trp-sensitive (aroH)
phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (aroF)
shikimate 5-dehydrogenase (aroE)
shikimate kinase (aroK)
tryptophan synthase, alpha subunitunit (trpA)
tryptophan synthase, beta subunitunit (trpB)
Aspartate family
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, (dapD)
5,10-methylenetetrahydrofolate reductase (metF)
5-methyltetrahydrofolate--homocysteine methyltransferase (metH)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
asparagine synthase B, glutamine-hydrolyzing (asnB)
aspartate aminotransferase (aspC)
aspartate aminotransferase, putative
aspartate-semialdehyde dehydrogenase (asd)
aspartate-semialdehyde dehydrogenase, putative
aspartokinase I/homoserine dehydrogenase, threonine-sensitive (thrA)
aspartokinase II/homoserine dehydrogenase, methionine-sensitive (metL)
aspartokinase III, lysine-sensitive (lysC)
aspartokinase, alpha and beta subunitunits
aspartokinase, putative
cystathionine beta-lyase (metC)
cystathionine gamma-synthase (metB)
diaminopimelate decarboxylase (lysA)
diaminopimelate epimerase (dapF)
dihydrodipicolinate reductase (dapB)
dihydrodipicolinate synthase (dapA)
homoserine kinase (thrB)
homoserine O-succinyltransferase (metA)
succinyl-diaminopimelate desuccinylase (dapE)
threonine synthase (thrC)
Glutamate family
acetylglutamate kinase (argB)
acetylornithine aminotransferase (argD)
acetylornithine deacetylase (argE)
argininosuccinate lyase (argH)
argininosuccinate synthase (argG)
gamma-glutamyl P reductase (proA)
glutamate 5-kinase (proB)
glutamate synthase, large subunit (gltB)
glutamate synthase, large subunit (gltB)
glutamate synthase, small subunit (gltD)
glutamate synthase, small subunit (gltD)
glutamate--ammonia ligase (glnA)
glutamate-ammonia-ligase adenylyltransferase (glnE)
N-acetyl-gamma-glutamyl-phosphate reductase (argC)
N-acetylglutamate synthase (argA)
nitrogen reg protein P-II (glnB)
ornithine carbamoyltransferase (argF)
protein-P-II uridylyltransferase (glnD)
pyrroline-5-carboxylate reductase (proC)
Pyruvate family
2-isopropylmalate synthase (leuA)
3-isopropylmalate dehydratase, large subunit (leuC)
3-isopropylmalate dehydratase, small subunit (leuD)
3-isopropylmalate dehydrogenase (leuB)
acetolactate synthase (ilvK)
VC0031
VC0030
VC2483
VC2482
VC0029
VC0028
VC0162
VC0027
VC0019
acetolactate synthase II, large subunit (ilvG)
acetolactate synthase II, small subunit (ilvM)
acetolactate synthase III, large subunit (ilvI)
acetolactate synthase III, small subunit (ilvH)
branched-chain amino acid amiotransferase (ilvE)
dihydroxy-acid dehydratase (ilvD)
ketol-acid reductoisomerase (ilvC)
threonine dehydratase (ilvA)
valine--pyruvate aminotransferase (avtA)
Serine family
VC0968
cysteine synthase A (cysK)
VC0537
cysteine synthase B (cysM)
VC1061
cysteine synthase/cystathionine beta-synthase family protein
VC2481
D-3-phosphoglycerate dehydrogenase (serA)
VC1159
phosphoserine aminotransferase (serC)
VC2345
phosphoserine phosphatase (serB)
VC2649
serine acetyltransferase (cysE)
VC0941
serine hydroxymethyltransferase (glyA)
VCA0278 serine hydroxymethyltransferase (glyA)
Histidine family
VC1136
amidotransferase HisH (hisH)
VC1132
ATP phosphoribosyltransferase (hisG)
VC1133
histidinol dehydrogenase (hisD)
VC1134
histidinol-phosphate aminotransferase (hisC)
VC1135
imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase (hisB)
VC1138
imidazoleglycerol-phosphate synthase, cyclase subunit (hisF)
VC1139
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP
pyrophosphohydrolase (hisI)
VC1137
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase (hisA)
Other
VCA0513 amino acid biosynthesis aminotransferase
Purines, pyrimidines, nucleosides, and nucleotides
2'-Deoxyribonucleotide metabolism
VCA0511 anaerobic ribonucleoside-triphosphate reductase (nrdD)
VCA0512 anaerobic ribonucleoside-triphosphate reductase activating protein (nrdG)
VC1256
ribonucleoside-diphosphate reductase, alpha subunit (nrdA)
VC1255
ribonucleoside-diphosphate reductase, beta subunit (nrdB)
VC0675
thymidylate synthase (thyA)
Nucleotide and nucleoside interconversions
VCA0545 5`-nucleotidase, putative
VC0986
adenylate kinase (adk)
VC1916
cytidylate kinase (cmk)
VC1979
deoxyguanosinetriphosphate triphosphohydrolase (dgt)
VCA0197 GMP reductase (guaC)
VC2708
guanylate kinase (gmk)
VC1129
inosine-guanosine kinase (gsk)
VCA0801 inosine-guanosine kinase (gsk)
VC0756
nucleoside diphosphate kinase (ndk)
VC1167
thymidine kinase (tdk)
VC2016
thymidylate kinase (tmk)
VC1038
uridine kinase (udk)
VC2258
uridylate kinase (pyrH)
Purine ribonucleotide biosynthesis
VC1126
adenylosuccinate lyase (purB)
VC2602
adenylosuccinate synthase (purA)
VC1004
amidophosphoribosyltransferase (purF)
VC1992
formyltetrahydrofolate deformylase (purU)
VC0768
GMP synthase (guaA)
VC0767
inosine-5`-monophosphate dehydrogenase (guaB)
VC0275
phosphoribosylamine--glycine ligase (purD)
VC0051
phosphoribosylaminoimidazole carboxylase, ATPase subunit (purK)
VC0052
phosphoribosylaminoimidazole carboxylase, catalytic subunit (purE)
VC1190
phosphoribosylaminoimidazole-succinocarboxamide synthase, putative
VC0276
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP
cyclohydrolase (purH)
VC2226
phosphoribosylformylglycinamidine cyclo-ligase (purM)
VC0869
phosphoribosylformylglycinamidine synthase (purL)
VC2227
phosphoribosylglycinamide formyltransferase (purN)
VC1228
phosphoribosylglycinamide formyltransferase 2 (purT)
VC2183
VC2510
VC2511
VC2389
VC2390
VC2448
VCA0925
VC1491
VC0211
VC1911
VC1053
VC1231
VC0585
VC2225
VC2277
VC2174
VC0395
VC2562
VC2416
VC2751
VC0441
VCA0840
VC2348
VCA0053
VC2347
VC2349
VC1034
VCA0134
VC2249
VC2513
VC1483
VC2021
VC2109
VC2019
VC2023
VCA0751
VCA0691
VCA0690
VC0296
VC0295
VC2244
VC1000
VC2020
VC0248
VC1215
VC0315
VC1122
VCA0714
VC2024
VC0093
VC2457
VC0135
VC2022
VC2255
VC1936
VC0339
VCA0688
VC1340
VC1877
VC1993
VC0251
VC2758
VC1047
VC1046
VC2759
VCA0221
VCA0490
VCA0863
VC1985
VC2484
VC2341
VCA1110
ribose-phosphate pyrophosphokinase (prsA)
Pyrimidine ribonucleotide biosynthesis
aspartate carbamoyltransferase, catalytic subunit (pyrB)
aspartate carbamoyltransferase, reg subunit (pyrI)
carbamoyl-phosphate synthase, large subunit (carB)
carbamoyl-phosphate synthase, small subunit (carA)
CTP synthase (pyrG)
dihydroorotase (pyrC)
dihydroorotate dehydrogenase (pyrD)
orotate phosphoribosyltransferase (pyrE)
orotidine 5`-phosphate decarboxylase (pyrF)
Salvage of nucleosides and nucleotides
adenine phosphoribosyltransferase (apt)
cytidine deaminase (cdd)
hypoxanthine phosphoribosyltransferase (hpt)
uracil phosphoribosyltransferase, (upp)
xanthine-guanine phosphoribosyltransferase (gpt)
Sugar-nucleotide biosynthesis and conversions
UDP-sugar hydrolase, (ushA)
UTP--glucose-1-phosphate uridylyltransferase (galU)
Other
2`,3`-cyclic-nucleotide 2`-phosphodiesterase (cpdB)
2`,3`-cyclic-nucleotide 2`-phosphodiesterase, putative
adenosine deaminase (add)
bis(5`-nucleosyl)-tetraphosphatase (apaH)
deoxycytidylate deaminase, putative
phosphopentomutase (deoB)
purine nucleoside phosphorylase (deoD)
purine nucleoside phosphorylase (deoD)
thymidine phosphorylase (deoA)
uridine phosphorylase (udp)
uridine phosphorylase (udp)
Fatty acid and phospholipid metabolism
Biosynthesis
(3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase (fabZ)
1-acyl-sn-glycerol-3-phosphate acyltransferase (plsC)
3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase (fabA)
3-oxoacyl-(acyl-carrier-protein) reductase (fabG)
3-oxoacyl-(acyl-carrier-protein) synthase I (fabB)
3-oxoacyl-(acyl-carrier-protein) synthase II (fabF)
3-oxoacyl-(acyl-carrier-protein) synthase III (fabH)
3-oxoacyl-(acyl-carrier-protein) synthase III (fabH)
acetoacetyl-CoA reductase
acetyl-CoA acetyltransferase
acetyl-CoA carboxylase, biotin carboxyl carrier protein (accB)
acetyl-CoA carboxylase, biotin carboxylase (accC)
acetyl-CoA carboxylase, carboxyl transferase alpha subunit (accA)
acetyl-CoA carboxylase, carboxyl transferase beta subunit (accD)
acyl carrier protein (acp)
acyl carrier protein, putative
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA)
CDP-diacylglycerol--serine o-phosphatidyltransferase (pssA)
cyclopropane-fatty-acyl-phospholipid synthase (cfa)
diacylglycerol kinase (dgkA)
fatty acid/phospholipid synthesis protein PlsX (plsX)
glycerol-3-phosphate acyltransferase (plsB)
holo-(acyl-carrier-protein) synthase (acpS)
lysophospholipase L2 (lypA)
malonyl Coa-acyl carrier protein transacylase (fabD)
phosphatidate cytidylyltransferase (cdsA)
phosphatidate cytidylyltransferase, putative
phosphatidylserine decarboxylase (psd)
polyhydroxyalkanoic acid synthase (phaC)
prpE protein (prpE)
tetraacyldisaccharide 4`-kinase (lpxK)
Degradation
2,4-dienoyl-CoA reductase (fadH)
acyl protein synthase/acyl-CoA reductase RfbN
fatty oxidation complex, alpha subunit (fadB)
fatty oxidation complex, alpha subunit (yfcX)
fatty oxidation complex, beta subunit
fatty oxidation complex, beta subunit (fadA)
lactonizing lipase (lipA)
lipase, GDXG family
lipase, putative
long-chain-fatty-acid--CoA ligase (fadD)
long-chain-fatty-acid--CoA ligase
long-chain-fatty-acid--CoA ligase, putative
long-chain-fatty-acid-CoA ligase, putative
VC2265
VCA0035
VC1355
VCA0552
phosphatidylglycerophosphatase A (pgpA)
phosphatidylglycerophosphatase B, putative
Other
acylphosphatase
fatty acid cis/trans isomerase
Biosynthesis of cofactors, prosthetic groups, and carriers
Biotin
VC1113
8-amino-7-oxononanoate synthase (bioF)
VC1111
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA)
VC2718
bioH protein (bioH)
VC1950
biotin sulfoxide reductase (bisZ)
VC1112
biotin synthase (bioB)
VC1114
biotin synthesis protein BioC (bioC)
VC0319
birA bifunctional protein (birA)
VC1115
dethiobiotin synthase (bioD)
Folic acid
VC0525
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
(folK)
VC0593
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
(folK)
VC2018
4-amino-4-deoxychorismate lyase (pabC)
VC0440
dihydrofolate reductase (folA)
VC0524
dihydroneopterin aldolase FolB, putative
VC0638
dihydropteroate synthase (folP)
VC1001
folylpolyglutamate synthase/dihydrofolate synthase (folC)
VCA0616 GTP cyclohydrolase (folE)
VC1942
methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate
cyclohydrolase (folD)
VC2619
para-aminobenzoate synthase glutamine amidotransferase, component II
(pabA)
VC1303
para-aminobenzoate synthase, component I (pabB)
Heme, porphyrin, and cobalamin
VC1240
alpha-ribazole-5`-phosphate phosphatase CobC, putative
VC1040
cob(I)alamin adenosyltransferase (cobA)
VC1238
cobalamin (5`-P) synthase (cobS)
VC2380
cobalamin biosynthesis protein CbiB, putative
VC1239
cobinamide kinase/cobinamide phosphate guanylyltransferase (cobU)
VCA0727 cobyric acid synthase (cobQ)
VC0055
coproporphyrinogen III oxidase, aerobic (hemF)
VC0105
delta-aminolevulinic acid dehydratase (hemB)
VC0987
ferrochelatase (hemH)
VC0626
glutamate-1-semialdehyde 2,1-aminomutase (hemL)
VC2180
glutamyl-tRNA reductase (hemA)
VC0117
hemY protein (hemY)
VC1509
nicotinate mononucleotide:5,6-dimethylbenzimidazole
phosphoribosyltransferase (cobB)
VC1237
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
(cobT)
VC0116
oxygen-indep coproporphyrinogen III oxidase (hemN)
VC0455
oxygen-indep coproporphyrinogen III oxidase, putative
VCA0909 oxygen-indep coproporphyrinogen III oxidase, putative
VC0120
porphobilinogen deaminase (hemC)
VC2755
protoporphyrinogen oxidase (hemG)
VC1363
siroheme synthase component enzyme
VC2561
uroporphyrin-III C-methyltransferase (cysG)
VC0118
uroporphyrin-III C-methyltransferase, putative
VC0332
uroporphyrinogen decarboxylase (hemE)
VC0119
uroporphyrinogen-III synthase (hemD)
Lipoate
VC1388
lipoate-protein ligase A (lplA)
VC0944
lipoate-protein ligase B (lipB)
VC0943
lipoic acid synthase (lipA)
Menaquinone and ubiquinone
VC2673
1,4-dihydroxy-2-naphthoate octaprenyltransferase (menA)
VC1975
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase/2oxoglutarate decarboxylase (menD)
VC1257
3-demethylubiquinone-9 3-methyltransferase (ubiG)
VC2541
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (ubiX)
VC0094
4-hydroxybenzoate octaprenyltransferase (ubiA)
VC0095
chorismate--pyruvate lyase (ubiC)
VC0890
geranyltranstransferase (ispA)
VC1976
menaquinone-specific isochorismate synthase (menF)
VC1973
naphthoate synthase (menB)
VC1972
o-succinylbenzoate-CoA synthase (menC)
VC1971
o-succinylbenzoic acid--CoA ligase (menE)
VC0434
octaprenyl-diphosphate synthase (ispB)
VC2366
s-adenosylmethionine:2-demethylmenaquinone methyltransferase (menG)
VC2672
s-adenosylmethionine:2-demethylmenaquinone methyltransferase (menG)
VC2475
ubiH protein (ubiH)
VC0085
VC0083
VC1024
VC1025
VC1026
VC1027
VC1028
VCA0617
VC1527
VCA0618
VC1526
VC2307
VC0592
VC0215
VC0591
VC0476
VC2108
VC0444
VC2458
VCA1079
VCA1060
VC2269
(ribB/A)
VC1263
VC0681
VC2270
VC2268
VC2271
VC0194
VCA0558
VC0556
VC0468
VC2308
(thiJ)
VC1296
VC2289
VC0061
VC0894
VC2266
VC0062
VC0063
VC0065
VC0066
VC0064
VC2469
VCA0207
VCA0098
VC2422
VCA0712
VC1833
VC2254
VC0889
VCA0723
VC1299
VC0320
VCA0827
VC2256
VC0487
VC0994
VC1783
VC0722
VC2545
VC0723
VCA0814
VCA0815
VC1623
VCA1063
ubiquinone biosynthesis protein AarF, putative
ubiquinone/menaquinone biosynthesis methlytransferase UbiE (ubiE)
Molybdopterin
molybdenum cofactor biosynthesis protein A (moaA)
molybdenum cofactor biosynthesis protein B (moaB)
molybdenum cofactor biosynthesis protein C (moaC)
molybdenum cofactor biosynthesis protein D (moaD)
molybdenum cofactor biosynthesis protein E (moaE)
molybdopterin biosynthesis MoeA protein (moeA)
molybdopterin biosynthesis MoeA protein (moeA)
molybdopterin biosynthesis MoeB protein (moeB)
molybdopterin-guanine dinucleotide biosynthesis protein A (mobA
Pantothenate and coenzyme A
2-dehydropantoate 2-reductase (panE)
3-methyl-2-oxobutanoate hydroxymethyltransferase (panB)
DNA/pantothenate metabolism flavoprotein (dfp)
pantoate--beta-alanine ligase (panC)
Pyridoxine
D-erythrose 4-phosphate dehydrogenase (epd)
erythronate-4-phosphate dehydrogenase (pdxB)
pyridoxal phosphate biosynthetic protein PdxA (pdxA)
pyridoxal phosphate biosynthetic protein PdxJ (pdxJ)
pyridoxamine 5`-phosphate oxidase (pdxH)
Riboflavin, FMN, and FAD
3,4-dihydroxy-2-butanone 4-phosphate synthase (ribB)
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II
GTP cyclohydrolase II (ribA)
riboflavin kinase/FMN adenylyltransferase (ribF)
riboflavin synthase, alpha subunit (ribE)
riboflavin synthase, beta subunit (ribH)
riboflavin-specific deaminase (ribD)
Glutathione
gamma-glutamyltranspeptidase (ggt)
gamma-glutamyltranspeptidase, putative
glutamate--cysteine ligase (gshA)
glutathione synthase (gshB)
Thiamine
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme
phosphomethylpyrimidine kinase (thiD)
thiamin biosynthesis lipoprotein ApbE (apbE)
thiamin biosynthesis protein ThiC (thiC)
thiamin biosynthesis protein ThiI (thiI)
thiamin-monophosphate kinase (thiL)
thiamin-phosphate pyrophosphorylase (thiE)
thiF protein (thiF)
thiG protein (thiG)
thiH protein (thiH)
thiS protein (thiS)
Pyridine nucleotides
l-aspartate oxidase (nadB)
NH(3)-dep NAD(+) synthase (nadE)
nicotinate phosphoribosyltransferase (pncB)
nicotinate-nucleotide pyrophosphorylase, carboxylating (nadC)
pyrazinamidase/nicotinamidase (pncA)
quinolinate synthase A (nadA)
Other
1-deoxy-D-xylulose 5-phosphate reductoisomerase (dxr)
1-deoxyxylulose-5-phosphate synthase (dxs)
3-hydroxy-3-methylglutaryl CoA reductase (hmgA)
6-pyruvoyl tetrahydrobiopterin synthase, putative
pantothenate kinase (coaA)
pterin-4-alpha-carbinolamine dehydratase (phhB)
undecaprenyl diphosphate synthase (uppS)
Central intermediary metabolism
Amino sugars
glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (glmS)
N-acetylglucosamine-6-phosphate deacetylase (nagA)
N-acetylglucosamine-6-phosphate deacetylase (nagA)
Phosphorus compounds
exopolyphosphatase (ppx)
inorganic pyrophosphatase (ppa)
polyphosphate kinase (ppk)
Polyamine biosynthesis
agmatinase (speB)
biosynthetic arginine decarboxylase (speA)
carboxynorspermidine decarboxylase (nspC)
ornithine decarboxylase, inducible (speF)
VC2558
VC2722
VC0386
VC2559
VC2560
VC0384
VC0385
VCA0620
VCA0604
VC2504
VC1344
VC0737
VC0252
VC0655
VCA0442
VCA0470
VCA0263
VCA0400
VCA0479
VCA0436
VCA0474
VCA0402
VCA0417
VCA0505
VCA0316
VCA0473
VC1341
VC1063
VC1589
VCA0523
VCA0605
VC1626
VC1625
VC2309
VC0748
VC0392
VCA0783
VCA0274
VC0058
VC0586
VC2240
VCA0269
VCA0897
VC2097
VC1945
VCA0614
VC0100
VC0099
VC1149
VC0454
VC1347
VCA0584
VCA0496
VCA0585
VC1270
VCA0836
VCA0877
VCA0825
VCA0824
VC2379
VC0745
VC2332
VCA0993
VCA0998
VC0667
VC2231
VC1740
VCA0859
VCA1048
VCA0099
VC1345
VCA0151
VC1059
VC0979
VC1119
VCA1108
VCA0301
VC2047
Sulfur metabolism
adenylylsulfate kinase (cysC)
cysQ protein (cysQ)
phosphoadenosine phosphosulfate reductase (cysH)
sulfate adenylate transferase, subunit 1 (cysN)
sulfate adenylate transferase, subunit 2 (cysD)
sulfite reductase (NADPH) flavoprotein alpha-component (cysJ)
sulfite reductase (NADPH) hemoprotein beta-component (cysJ)
thiosulfate Stransferase SseA, putative
Other
2-aminoethylphosphonate:pyruvate aminotransferase (phnW)
2-hydroxyacid dehydrogenase
4-hydroxyphenylpyruvate dioxygenase
acetoin utilization protein AcuB, putative
acetyltransferase RfbO, CysE/LacA/LpxA/NodL family
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acetyltransferase, putative
acyl-CoA thioesterase II (tesB)
alpha-acetolactate decarboxylase (aldC)
aminotransferase, class II
aminotransferase, class III
aminotransferase, class III
aminotransferase, class III/decarboxylase, group II
aminotransferase, class V
aminotransferase, class V (nifS)
aminotransferase, class V
arylesterase
carbonic anhydrase
carbonic anhydrase, family 3
carbonic anhydrase, putative
decarboxylase
decarboxylase, group II
devB protein (devB)
esterase/lipase YbfF, putative
FAD monooxygenase, PheA/TfdB family
formate--tetrahydrofolate ligase (fhs)
glpE protein (glpE)
glpG protein (glG)
glutamate decarboxylase, putative
glutaminase family protein
glutathione S-transferase
glutathione S-transferase, putative
glutathione S-transferase, putative
glutathione S-transferase, putative
glyoxylase II family protein
hexapeptide-repeat containing-acetyltransferase
hydrolase, putative
L-2,4-diaminobutyric acid acetyltransferase
L-2,4-diaminobutyric acid transaminase
MTA/SAH nucleosidase (pfs)
myo-inositol-monophosphatase
N-acetyltransferase
N-ethylmaleimide reductase (nemA)
NADH-dep flavin oxidoreductase, Oye family
oxidoreductase Tas, aldo/keto reductase family
oxidoreductase, acyl-CoA dehydrogenase family
oxidoreductase, acyl-CoA dehydrogenase family
oxidoreductase, aldo/keto reductase 2 family
oxidoreductase, Gfo/Idh/MocA family
oxidoreductase, Gfo/Idh/MocA family
oxidoreductase, putative
oxidoreductase, putative
oxidoreductase, short-chain dehydrogenase/reductase family
oxidoreductase, short-chain dehydrogenase/reductase family
oxidoreductase, short-chain dehydrogenase/reductase family
oxidoreductase, short-chain dehydrogenase/reductase family
oxidoreductase, short-chain dehydrogenase/reductase family
oxidoreductase, short-chain dehydrogenase/reductase family
VCA1057 oxidoreductase, short-chain dehydrogenase/reductase family
VC1591
oxidoreductase, short-chain dehydrogenase/reductase family
VCA0985 oxidoreductase/Fe-S cluster-binding protein
VCA0637 oxygen-insensitive NAD(P)H nitroreductase
VC0639
phosphoglucomutase and phosphomannomutase phosphoserine family
protein MrsA
VCA0606 phosphonoacetaldehyde phosphonohydrolase (phnX)
VC1041
phosphotyrosine protein phosphatase
VC0916
phosphotyrosine protein phosphatase
VC1949
pvcA protein (pvcA)
VC2638
pyridine nucleotide-disulfide oxidoreductase, class I
VC0151
pyridine nucleotide-disulfide oxidoreductase, class I (udhA)
VC0552
quinone oxidoreductase
VC0472
S-adenosylmethionine synthase (metK)
VCA0947 spermidine n1-acetyltransferase (speG)
VC1226
thiopurine methyltransferase
VC0238
transferase, hexapeptide repeat family
VCA0886
VCA0007
VC1905
VC0423
VC2617
VC2603
VC2698
VC0786
VCA0875
VC1204
VCA0277
VCA0276
VCA0280
VC1202
VC1205
VCA0765
VC1995
VC1300
VCA0666
VC0281
VCA0828
VCA1073
(putA)
VC2616
VC1242
VCA0885
VCA0161
VC1203
VCA0747
VCA0748
VCA0749
VC1515
VC1519
VC1513
VC1511
VC1512
VC2659
VC2658
VC2656
VC2657
VC1692
VC2770
VC2768
VC2769
VC2766
VC2764
VC2767
VC2763
VC2765
VC2771
VCA0249
VCA0538
VC1442
VC1441
VC1439
VC1440
VC2053
Energy metabolism
Amino acids and amines
2-amino-3-ketobutyrate CoA ligase (kbl)
3-hydroxyisobutyrate dehydrogenase, putative
alanine dehydrogenase (ald)
arginine deiminase (arcA)
arginine/ornithine succinyltransferase, putative
asparaginase, putative
aspartate ammonia-lyase (aspA)
D- amino acid dehydrogenase, small subunit (dadA)
D-serine dehydratase (dsdA)
formiminoglutamase (hutG)
glycine cleavage system H protein (gcvH)
glycine cleavage system phosphate protein (gcvP)
glycine cleavage system T protein (gcvT)
histidine ammonia-lyase (hutH)
imidazolonepropionase (hutI)
L-allo-threonine aldolase (ybjU)
L-asparaginase I (ansA)
L-serine dehydratase 1 (sdaA)
L-serine dehydratase 1 (sdaA)
lysine decarboxylase, inducible (cadA)
phenylalanine-4-hydroxylase (phhA)
proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase
succinylglutamate 5-semialdehyde dehydrogenase (aruD)
succinylglutamate desuccinylase (astE)
threonine 3-dehydrogenase (tdh)
tryptophanase (tnaA)
urocanate hydratase (hutU)
Anaerobic
anaerobic glycerol-3-phosphate dehydrogenase, subunit A (glpA)
anaerobic glycerol-3-phosphate dehydrogenase, subunit B (glpB)
anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC)
chaperone, formate dehydrogenase-specific, putative
formate dehydrogenase accessory protein (fdhD)
formate dehydrogenase, alpha subunit, putative
formate dehydrogenase, cytochrome B556 subunit (fdnI)
formate dehydrogenase, Fe-S subunit (fdhB)
fumarate reductase, 13 kDa hydrophobic protein (frdD)
fumarate reductase, 15 kDa hydrophobic protein (frdC)
fumarate reductase, flavoprotein subunit (frdA)
fumarate reductase, Fe-S protein (frdB)
trimethylamine-N-oxide reductase (torA)
ATP-proton motive force interconversion
ATP synthase F0, A subunit (atpB)
ATP synthase F0, B subunit (atpF)
ATP synthase F0, C subunit (atpE)
ATP synthase F1, alpha subunit (atpA)
ATP synthase F1, beta subunit (atpD)
ATP synthase F1, delta subunit (atpH)
ATP synthase F1, epsilon subunit (atpC)
ATP synthase F1, gamma subunit (atpG)
ATP synthase protein I (atpI)
Electron transport
cytochrome b561, putative
cytochrome b561, putative
cytochrome c oxidase, subunit CcoN (ccoN)
cytochrome c oxidase, subunit CcoO (ccoO)
cytochrome c oxidase, subunit CcoP (ccoP)
cytochrome c oxidase, subunit CcoQ (ccoQ)
cytochrome c-type biogenesis protein CcmE (ccmE)
VC2052
cytochrome c-type biogenesis protein CcmF (ccmF)
VC2049
cytochrome c-type biogenesis protein CcmH, (ccmH)
VC2050
cytochrome c-type biogenesis protein CycL (cycL)
VC1693
cytochrome c-type protein TorC (torC)
VC1951
cytochrome c-type protein YecK (yecK)
VC0112
cytochrome c4
VC0168
cytochrome c5
VC0089
cytochrome c551 peroxidase (yhjA)
VC2241
cytochrome c554
VCA0766 cytochrome c554
VC1844
cytochrome d ubiquinol oxidase, subunit I (cydA)
VCA0872 cytochrome d ubiquinol oxidase, subunit I (cydA)
VC1843
cytochrome d ubiquinol oxidase, subunit II (cydB)
VCA0873 cytochrome d ubiquinol oxidase, subunit II (cydB)
VC0753
ferredoxin
VC0311
ferredoxin
VC0804
ferredoxin
VC0716
ferredoxin
VC2099
flavodoxin 1 (fldA)
VC2420
flavodoxin 2 (fldB)
VC1146
glutaredoxin 1 (grxA)
VCA0992 glutaredoxin 2 (grx2)
VC1616
glutaredoxin, putative
VC0186
glutathione reductase (gor)
VC0342
Fe-S cluster-binding protein
VC1516
Fe-S cluster-binding protein
VCA0676 Fe-S cluster-binding protein NapF (napF)
VC1254
Fe-S cluster-binding protein, putative
VCA0563 NAD(P) transhydrogenase, alpha subunit (pntA)
VCA0564 NAD(P) transhydrogenase, beta subunit (pntB)
VC2607
NAD(P)H oxidoreductase, putative
VC0312
NAD(P)H-flavin reductase
VC1890
NADH dehydrogenase (ndh)
VC1581
NADH dehydrogenase, putative
VCA0155 NADH dehydrogenase, putative
VCA0157 NADH dehydrogenase, putative
VCA0644 NADH oxidase, putative
VC2295
NADH:ubiquinone oxidoreductase, Na+ translocating, alpha subunit (nqrA)
VC2290
NADH:ubiquinone oxidoreductase, Na+ translocating, beta subunit (nqrF)
VC2293
NADH:ubiquinone oxidoreductase, Na+ translocating, gamma subunit
(nqrC)
VC2291
NADH:ubiquinone oxidoreductase, Na+ translocating, hydrophobic
membrane protein (nqrE)
VC2292
NADH:ubiquinone oxidoreductase, Na+ translocating, hydrophobic
membrane protein (nqrD)
VC2294
NADH:ubiquinone oxidoreductase, Na+ translocating, hydrophobic
membrane protein (nqrB)
VC0715
NADPH-flavin oxidoreductase (frp)
VCA0677 napD protein (napD)
VC1694
napE protein (napE)
VCA0678 periplasmic nitrate reductase (napA)
VCA0679 periplasmic nitrate reductase, cytochrome c-type protein (napB)
VCA0680 periplasmic nitrate reductase, cytochrome c-type protein (napC)
VCA0530 pyruvate-flavoredoxin oxidoreductase (ydbK)
VC1571
quinol oxidase, subunit I (qxtA)
VC1570
quinol oxidase, subunit II (qxtB)
VC1017
RnfA-related protein 3
VC1016
RnfB-related protein
VC1015
RnfC-related protein
VC1014
RnfD-related protein
VC1012
RnfE-related protein
VC1013
RnfG-related protein
VC2701
thiol:disulfide interchange protein DsbD (dsbD)
VC2051
thiol:disulfide interchange protein DsbE (dsbE)
VC0306
thioredoxin (trxA)
VCA0752 thioredoxin 2 (trxC)
VC1182
thioredoxin reductase (trxB)
VC0574
ubiquinol--cytochrome c reductase, cytochrome B (petB)
VC0575
ubiquinol--cytochrome c reductase, cytochrome c1 (petC)
VC0573
ubiquinol--cytochrome c reductase, Fe-S subunit (petA)
Entner-Doudoroff
VC0285
4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate
aldolase (eda)
VC0288
phosphogluconate dehydratase (edd)
Fermentation
VC1098
acetate kinase (ackA)
VCA0235 acetate kinase (ackA)
VC2033
alcohol dehydrogenase/acetaldehyde dehydrogenase (adhE)
VC0819
aldehyde dehydrogenase (aldA)
VCA1067 aldehyde dehydrogenase
VC1819
VC1336
VC0801
VC0796
VC0799
VC0798
VC0797
VC0800
VCA0192
VC1866
VCA0702
VC1147
VC0250
VC1337
VC0550
VC0793
VC0551
VC0792
VC1097
VC1869
VC0026
VCA0517
VC2689
VC2447
VC2544
VC0478
VC0374
VC1069
VC2000
VCA0843
VCA0984
VC2738
VCA0987
VC0477
VC0336
VC0485
VC2008
VCA0708
VC2670
VCA0898
VCA0896
VC2480
VC2625
VCA0623
VC0473
VCA0624
VC2414
VC2413
(aceF)
VC2412
aldehyde dehydrogenase, (aldA)
carboxyphosphonoenolpyruvate phosphonomutase (prpB)
citG protein (citG)
citrate (pro-3S)-lyase ligase (citC)
citrate lyase, alpha subunit (citF)
citrate lyase, beta subunit (citE)
citrate lyase, gamma subunit (citD)
citX protein (citX)
D-lactate dehydrogenase (ldhA)
formate acetyltransferase (pflB)
Fe-containing alcohol dehydrogenase
Fe-containing alcohol dehydrogenase
Fe-containing alcohol dehydrogenase family protein RfbM
methylcitrate synthase (prpC)
oxaloacetate decarboxylase, alpha subunit (oadA)
oxaloacetate decarboxylase, alpha subunit (oadA)
oxaloacetate decarboxylase, beta subunit (oadB)
oxaloacetate decarboxylase, beta subunit (oadB)
phosphate acetyltransferase (pta)
pyruvate formate-lyase 1 activating enzyme (pflA)
Zn-binding alcohol dehydrogenase
Glycolysis/gluconeogenesis
1-phosphofructokinase (fruK)
6-phosphofructokinase, isozyme I (pfkA)
enolase (eno)
fructose-1,6-bisphosphatase (fbp)
fructose-bisphosphate aldolase, class II (fbaA)
glucose-6-phosphate isomerase (pgi)
glyceraldehyde 3-phosphate dehydrogenase (gap)
glyceraldehyde 3-phosphate dehydrogenase (gapA)
glyceraldehyde-3-phosphate dehydrogenase (gapA)
L-lactate dehydrogenase (lldD)
phosphoenolpyruvate carboxykinase (pckA)
phosphoenolpyruvate synthase (ppsA)
phosphoglycerate kinase (pgk)
phosphoglycerate mutase, 2,3-bisphosphoglycerate-indep (yibO)
pyruvate kinase I (pykF)
pyruvate kinase II (pykA)
pyruvate kinase II (pykA)
triosephosphate isomerase (tpiA)
Pentose phosphate pathway
6-phosphogluconate dehydrogenase, decarboxylating (gnd)
glucose-6-phosphate 1-dehydrogenase (zwf)
ribose-5-phosphate isomerase (rpiA)
ribulose-phosphate 3-epimerase (rpe)
transaldolase B (talB)
transketolase 1 (tktA)
transketolase 1 (tktA)
Pyruvate dehydrogenase
pyruvate dehydrogenase, E1 component (aceE)
pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase
pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase (lpdA)
Sugars
VC1594
aldose 1-epimerase (galM)
VCA0656 fructokinase (cscK)
VC1595
galactokinase (galK)
VC1596
galactose-1-phosphate uridylyltransferase (galT)
VCA1025 glucosamine-6-phosphate isomerase (nagB)
VCA0241 hexulose-6-phosphate isomerase SgbU, putative
VCA0242 hexulose-6-phosphate synthase SgbH, putative
VCA1046 mannitol-1-phosphate 5-dehydrogenase (mtlD)
VC1827
mannose-6-phosphate isomerase (manA)
VC0269
mannose-6-phosphate isomerase (manA)
VC2095
phosphoglucomutase (pgm)
VC0611
phosphoglucomutase/phosphomannomutase, putative
VC2624
phosphoglycolate phosphatase (gph)
VC0242
phosphomannomutase (rfbB)
VCA1041 phosphomannomutase
VC2613
phosphoribulokinase (prkB)
VCA0131 ribokinase (rbsK)
VCA0244 sugar isomerase SgaE, AraD/FucA family
VC2437
sugar kinase, pfkB family
VC0287
thermoresistant gluconokinase (gntV)
VC0262
UDP-glucose 4-epimerase (galE)
VCA0774 UDP-glucose 4-epimerase (galE)
TCA cycle
VC2087
2-oxoglutarate dehydrogenase, E1 component (sucA)
VC2086
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide
succinyltransferase (sucB)
VC1338
VC0604
VC2092
VC1304
VC1573
VC1141
VC0736
VC0432
VC0734
VC2091
VC2089
VC2090
VC2088
VC2084
VC2085
VCA0016
VCA0014
VC1558
VC1284
VC1690
VCA0860
VCA0250
VC2338
VC0692
VC0613
VC0612
VCA0027
VC0769
VC1073
VCA0811
VCA0700
VC1952
VCA0633
VCA0699
VC1727
VCA1029
VC1726
VCA0013
VC2217
VC2700
VCA0655
VC0911
VC2669
VC0298
VCA0829
VCA0657
VC0522
VC1725
VC2350
VCA0744
VC2651
VCA0136
VC1554
VC2236
VC1010
VC1188
VC2681
VCA0711
VC1784
VC2646
VC1745
VC1864
VC0008
VC1359
VCA1037
VC0010
VC1863
VCA1039
VC1362
VCA0978
putative
VC1861
VC1360
VC1862
VC1361
aconitate hydratase 1 (acnA)
aconitate hydratase 2 (acnB)
citrate synthase (gltA)
fumarate hydratase, class I, putative
fumarate hydratase, class II (fumC)
isocitrate dehydrogenase (icd)
isocitrate lyase (aceA)
malate dehydrogenase (mdh)
malate synthase A (aceB)
succinate dehydrogenase, cytochrome b556 subunit (sdhC)
succinate dehydrogenase, flavoprotein subunit (sdhA)
succinate dehydrogenase, hydrophobic membrane anchor protein (sdhD)
succinate dehydrogenase, Fe-S protein (sdhB)
succinyl-CoA synthase, alpha subunit (sucD)
succinyl-CoA synthase, beta subunit (sucC)
Biosynthesis and degradation of polysaccharides
1,4-alpha-glucan branching enzyme (glgB)
4-alpha-glucanotransferase (malQ)
6-phospho-beta-glucosidase (bglA)
6-phospho-beta-glucosidase (celF)
alpha-1,6-galactosidase, putative
alpha-amylase (malS)
alpha-amylase (amy1)
beta-galactosidase, (lacZ)
beta-hexosaminidase (chb)
beta-N-acetylhexosaminidase
cellobiose/cellodextrin-phosphorylase, putative
chitinase
chitinase, putative
chitinase, putative
chitinase, putative
chitodextrinase,
endochitinase ChiA (chiA)
glpM protein (glpM)
glucose-1-phosphate adenylyltransferase (glgC)
glucose-1-phosphate adenylyltransferase (glgC)
glycogen operon protein GlgX (glgX)
glycogen synthase (glgA)
maltodextrin phosphorylase (malP)
N,N'-diacetylchitobiase (chb)
pullulanase, (pulA)
sucrose-6-phosphate dehydrogenase (cscA)
trehalose-6-phosphate hydrolase (treC)
Other
5-carboxymethyl-2-hydroxymuconate delta isomerase, putative
acetyl-CoA synthase (acs)
acetyl-CoA synthase
aerobic glycerol-3-phosphate dehydrogenase (glpD)
beta-ketoadipate enol-lactone hydrolase, putative
beta-ketoadipate enol-lactone hydrolase, putative
deoxyribose-phosphate aldolase (deoC)
glycerol kinase (gplK)
glycerol-3-phosphate dehydrogenase (NAD+) (gpsA)
glycerophosphoryl diester phosphodiesterase (glpQ)
glycerophosphoryl diester phosphodiesterase, putative
hydroxyacylglutathione hydrolase GloB, putative
lactoylglutathione lyase (gloA)
malate oxidoreductase (sfcA)
malate oxidoreductase, putative
methylglyoxal synthase (mgsA)
neuraminidase (nanH)
phosphoenolpyruvate carboxylase (ppc)
succinate-semialdehyde dehydrogenase (gabD)
Transport and binding proteins
Amino acids, peptides and amines
amino acid ABC transporter, ATP-binding protein
amino acid ABC transporter, ATP-binding protein
amino acid ABC transporter, ATP-binding protein
amino acid ABC transporter, ATP-binding protein
amino acid ABC transporter, periplasmic amino acid-binding portion
amino acid ABC transporter, periplasmic amino acid-binding protein
amino acid ABC transporter, periplasmic amino acid-binding protein
amino acid ABC transporter, periplasmic amino acid-binding protein
amino acid ABC transporter, periplasmic amino acid-binding protein,
amino acid ABC transporter, permease protein
amino acid ABC transporter, permease protein
amino acid ABC transporter, permease protein
amino acid ABC transporter, permease protein
VCA1038 amino acid ABC transporter, permease protein
VCA1040 amino acid ABC transporter, permease protein
VC0009
amino acid ABC transproter, permease protein
VCA0760 arginine ABC transporter, ATP-binding protein (artP)
VCA0759 arginine ABC transporter, periplasmic arginine-binding protein (artI)
VCA0757 arginine ABC transporter, permease protein (artM)
VCA0758 arginine ABC transporter, permease protein (artQ)
VC0433
arginine/ornithine antiporter
VCA1002 AzlC family protein
VC0662
BR amino acid transport system II carrier protein (brnQ)
VC0280
cadaverine/lysine antiporter CadB, putative
VC1095
oligopeptide ABC transporter, ATP-binding protein (oppF)
VC1094
oligopeptide ABC transporter, ATP-binding protein (oppD)
VC1091
oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
(oppA)
VC1092
oligopeptide ABC transporter, permease protein (oppB)
VC1093
oligopeptide ABC transporter, permease protein (oppC)
VC0170
peptide ABC transporter, ATP-binding protein
VC1683
peptide ABC transporter, ATP-binding protein (sapD)
VC1684
peptide ABC transporter, ATP-binding protein (sapF)
VC0616
peptide ABC transporter, ATP-binding protein
VC0617
peptide ABC transporter, ATP-binding protein
VCA0588 peptide ABC transporter, ATP-binding protein, putative
VC0171
peptide ABC transporter, periplasmic peptide-binding protein
VC0620
peptide ABC transporter, periplasmic peptide-binding protein
VC1680
peptide ABC transporter, periplasmic peptide-binding protein (sapA)
VCA0591 peptide ABC transporter, periplasmic peptide-binding protein, putative
VC0173
peptide ABC transporter, permease protein
VC0172
peptide ABC transporter, permease protein
VC1681
peptide ABC transporter, permease protein (sapB)
VC0618
peptide ABC transporter, permease protein
VC0619
peptide ABC transporter, permease protein
VC1682
peptide ABC transporter, permease protein (sapC)
VCA0590 peptide ABC transporter, permease protein, putative
VCA0589 peptide ABC transporter, permease protein, putative
VC1168
proton/glutamate symporter (gltP)
VCA0088 proton/glutamate symporter (gltP)
VC0988
proton/peptide symporter family protein
VCA1062 putrescine -ornithine antiporter (potE)
VC1301
serine transp (sdaC)
VC1658
serine transp (sdaC)
VC2356
Na+/alanine symporter
VC1422
Na+/alanine symporter
VC0784
Na+/alanine symporter
VCA0041 Na+/glutamate symporter (glts)
VCA1071 Na+/proline symporter (putativeP)
VC1428
spermidine/putrescine ABC transporter, ATP-binding protein (potA)
VC1424
spermidine/putrescine ABC transporter, periplasmic spermidine/putrescinebinding protein (potD)
VC1425
spermidine/putrescine ABC transporter, periplasmic spermidine/putrescinebinding protein (potD)
VCA1113 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescinebinding protein
VC0704
spermidine/putrescine ABC transporter, periplasmic spermidine/putrescinebinding protein, putative
VC1426
spermidine/putrescine ABC transporter, permease protein (potC)
VC1427
spermidine/putrescine ABC transporter, permease protein (potB)
VC1279
transporter, BCCT family
VCA0160 tryptophan-specific transport protein (mtr)
VCA0772 tyrosine-specific transport protein (tyrP)
Anions
VC0969
cysZ protein (cysZ)
VCA0724 molybdenum ABC transporter, ATP-binding protein (modC)
VCA0726 molybdenum ABC transporter, periplasmic molybdenum-binding protein
(modA)
VCA0725 molybdenum ABC transporter, permease protein (modB)
VC0676
nptA protein (ntpA)
VC2442
pho4 family protein
VC0726
P ABC transporter, ATP-binding protein (pstB)
VCA0073 phosphate ABC transporter, ATP-binding protein (pstB)
VCA0070 phosphate ABC transporter, periplasmic phosphate-binding protein (pstS)
VC0721
phosphate ABC transporter, periplasmic phosphate-binding protein, putative
VC0724
phosphate ABC transporter, permease protein (pstC)
VC0725
phosphate ABC transporter, permease protein (pstA)
VCA0072 phosphate ABC transporter, permease protein (pstA)
VCA0071 phosphate ABC transporter, permease protein (pstC)
VC0541
sulfate ABC transporter, ATP-binding protein (cysA)
VC0539
sulfate ABC transporter, permease protein (cysT)
VC0540
sulfate ABC transporter, permease protein (cysW)
VC2031
sulfate permease family protein
VCA0077
VC0587
VCA0103
VCA0454
VC0538
sulfate permease family protein
sulfate permease family protein
sulfate permease family protein
sulfate-binding protein (sbp)
thiosulfate ABC transporter, periplasmic thiosulfate-binding protein (cysP)
Carbohydrates, organic alcohols, and acids
VC1970
benzoate transport protein (benE)
VC1927
C4-dicarboxylate transport protein (dctM)
VC1928
C4-dicarboxylate transport protein DctQ, putative
VC2699
C4-dicarboxylate transporter, anaerobic (dcuA)
VCA0665 C4-dicarboxylate transporter, anaerobic (dcuC)
VCA0205 C4-dicarboxylate transporter, anaerobic (dcuB)
VC1929
C4-dicarboxylate-binding periplasmic protein (dctP)
VC1779
C4-dicarboxylate-binding periplasmic protein (dctP)
VC0795
citrate/Na+ symporter (citS)
VC1695
formate transporter 1, putative
VCA0540 formate transporter 1, putative
VC1327
galactoside ABC transporter, ATP-binding protein (mglA)
VC1325
galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding
protein (mglB)
VC1328
galactoside ABC transporter, permease protein (mglC)
VC0286
gluconate permease, putative
VCA0983 L-lactate permease, putative
VC1042
long-chain fatty acid transport protein (fadL)
VC1043
long-chain fatty acid transport protein (fadL)
VCA0862 long-chain fatty acid transport protein (fadL)
VCA1028 maltoporin (ompS)
VCA0945 maltose ABC transporter, periplasmic maltose-binding protein (malE)
VCA0944 maltose ABC transporter, permease protein (malF)
VCA0943 maltose ABC transporter, permease protein (malG)
VCA0946 maltose/maltodextrin ABC transporter, ATP-binding protein (malK)
VCA0554 oxalate/formate antiporter, putative
VC0966
phosphocarrier protein HPr (ptsH)
VC0965
phosphoenolpyruvate-protein phosphotransferase (ptsI)
VC0672
phosphoenolpyruvate-protein phosphotransferase, (ptsP)
VC1283
PTS enzyme, cellobiose-specific IIA component (celC)
VC1281
PTS system, cellobiose-specific IIB component (celA)
VC1282
PTS system, cellobiose-specific IIC component (celB)
VC1820
PTS system, fructose-specific IIA component (frvA)
VCA0518 PTS system, fructose-specific IIA/FPR component (fruB)
VC1826
PTS system, fructose-specific IIABC component (fruA)
VC1822
PTS system, fructose-specific IIABC component (frwABC)
VC1823
PTS system, fructose-specific IIB component (frwB)
VC1821
PTS system, fructose-specific IIBC component (frwBC)
VCA0516 PTS system, fructose-specific IIBC component (fruA)
VC0964
PTS system, glucose-specific IIA component (crr)
VC2013
PTS system, glucose-specific IIBC component (ptsG)
VCA0245 PTS system, IIA component
VCA1045 PTS system, mannitol-specific IIABC component (mtlA)
VC0995
PTS system, N-acetylglucosamine-specific IIABC component (nagE)
VCA0653 PTS system, sucrose-specific IIBC component (scrA)
VC0207
PTS system, sucrose-specific IIBC component, putative
VC0910
PTS system, trehalose-specific IIBC component (treB)
VCA0127 ribose ABC transp protein (rbsD)
VCA0128 ribose ABC transporter, ATP-binding protein (rbsA)
VCA0130 ribose ABC transporter, periplasmic D-ribose-binding protein (rbsB)
VCA0129 ribose ABC transporter, permease protein (rbsC)
VC1235
Na+/dicarboxylate symporter
VCA0036 Na+/dicarboxylate symporter
VCA0669 sugar transp family protein
Cations
VC0607
ammonium transporter, putative
VC0365
bacterioferritin (bfr)
VC0364
bacterioferritin-associated ferredoxin (bfd)
VC1033
cation transport ATPase, E1-E2 family
VC2215
cation transport ATPase, E1-E2 family
VC1437
cation transport ATPase, E1-E2 family
VC0730
copper homeostasis protein (cutC)
VC0779
ferric vibriobactin ABC transporter, ATP-binding protein (fepC)
VC0776
ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding
protein (fepB)
VC0777
ferric vibriobactin ABC transporter, permease protein (fepD)
VC0778
ferric vibriobactin ABC transporter, permease protein (fepG)
VC2211
ferric vibriobactin receptor (viuA)
VCA0183 ferrisiderophore reductase (hmpA)
VC0078
ferritin (ftn)
VC2078
ferrous Fe transport protein A (feoA)
VC2077
ferrous Fe transport protein B (feoB)
VC2606
glutathione-regulated K+-efflux system protein KefB (kefB)
VC0992
glutathione-regulated K+-efflux system protein KefB, putative
VCA0576
VCA0915
VCA0913
VCA0914
VC0201
VCA0687
VCA0230
VC0610
VC0202
VCA0227
VC0608
VCA0685
VC0203
VCA0228
VCA0229
VC0609
VCA0686
VC0200
VC0475
(irgA)
VC1264
VC1655
VC2534
VCA0818
VC2037
VC1901
VCA1015
VC1627
VC0389
VCA0193
VCA0194
VC0043
VC2756
VC0042
VCA0529
VC0284
VCA0064
VCA0232
VCA0911
VC1546
VCA0912
VC1545
VCA0910
VC1544
VC1673
VC1757
VCA0638
VC0780
VC0775
VC2210
VC0774
(vibA)
VC0772
VC0771
VC0773
VC2082
VC2081
VC2083
heme transport protein HutA (hutA)
hemin ABC transporter, ATP-binding protein HutD, (hutD)
hemin ABC transporter, periplasmic hemin-binding protein HutB (hutB)
hemin ABC transporter, permease protein HutC (hutC)
iron(III) ABC transporter, ATP-binding protein
iron(III) ABC transporter, ATP-binding protein
iron(III) ABC transporter, ATP-binding protein
iron(III) ABC transporter, ATP-binding protein
iron(III) ABC transporter, periplasmic Fe-compound-binding protein
iron(III) ABC transporter, periplasmic Fe-compound-binding protein
iron(III) ABC transporter, periplasmic Fe-compound-binding protein
iron(III) ABC transporter, periplasmic Fe-compound-binding protein
iron(III) ABC transporter, permease protein
iron(III) ABC transporter, permease protein
iron(III) ABC transporter, permease protein
iron(III) ABC transporter, permease protein
iron(III) ABC transporter, permease protein
iron(III) compound receptor
Fe-regulated outer membrane virulence protein, TonB receptor family
Fe-regulated protein A, putative
Mg2+ transp (mgtE)
Mg2+ transp (mgtE)
Mg2+ transp MgtE, putative
Na+/H+ antiporter (yqkI)
Na+/H+ antiporter (nhaB)
Na+/H+ antiporter (nhaD)
Na+/H+ antiporter protein (nhaA)
Na+/H+ antiporter, putative
Na+/H+ antiporter, putative
K+ channel protein, putative
K+ uptake protein TrkA (trkA)
K+ uptake protein Trkh (trkH)
K+ uptake protein TrkH (trkH)
K+ uptake protein, Kup system (kup)
TonB system receptor
TonB system receptor, putative
TonB system receptor, putative
TonB system transport protein ExbB1 (exbB1)
TonB system transport protein ExbB2 (exbB2)
TonB system transport protein ExbD1 (exbD1)
TonB system transport protein ExbD2 (exbD2)
tonB1 protein (tonB1)
tonB2 protein (tonB2)
transporter, AcrB/D/F family
transporter, AcrB/D/F family
transporter, AcrB/D/F family
vibriobactin synthase component D (vibD)
vibriobactin synthesis protein, putative
vibriobactin utilization protein ViuB (viuB)
vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase (vibE)
vibriobactin-specific isochorismatase (vibB)
vibriobactin-specific isochorismate synthase (vibC)
Zn ABC transporter, ATP-binding protein (znuC)
Zn ABC transporter, periplasmic Zn-binding protein (znuA)
Zn ABC transporter, permease protein (znuB)
Nucleosides, purines and pyrimidines
VC1953
NupC family protein
VC2352
NupC family protein
VCA0179 NupC family protein
VCA0133 pnuC protein, (pnuC)
VC2171
uracil permease (uraA)
VC2712
xanthine/uracil permease family protein
Porins
VC1854
porin, putative
VC0972
porin, putative
Other
VCA0745 glycerol uptake facilitator protein, (glpF)
VC1552
glycerol-3-phosphate ABC transporter, ATP-binding protein (ugpC)
VC1549
glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-P-binding
protein (ugpB)
VC1551
glycerol-3-phosphate ABC transporter, permease protein (ugpE)
VC1550
glycerol-3-phosphate ABC transporter, permease protein (ugpA)
VCA0137 glycerol-3-phosphate transp (glpT)
VC2057
heme exporter protein A (ccmA)
VC2056
heme exporter protein B (ccmB)
VC2055
heme exporter protein C (ccmC)
VC2054
heme exporter protein D (ccmD)
VC0199
VCA0220
VCA0612
VC0246
VC0247
VC2761
VC1634
VCA0214
VCA0083
VCA0267
VC1540
VC1410
VC1411
VC0069
VC0629
VC1618
VC0914
VC0164
VC1675
VC1409
VC1391
VC1597
VC1447
VC1448
VC2539
VC2537
VC2538
VC1837
VC1836
VC1839
VC1838
VCA1084
VC1446
VC1878
VC1245
VC1244
VC0156
VC0907
VC0589
VC1486
VC1520
VC2520
VC2553
VC2608
VC1499
VCA0782
VC1568
VCA0977
VCA1101
VC0698
VC1103
VC1883
VC1525
VC1630
VCA0602
VCA0996
VCA0855
VC1660
VC2528
VC1666
VCA1098
VCA0603
VCA0807
VC1664
VC0906
VCA1099
VCA1100
VCA0601
VC1524
VC1102
VC1665
VC1273
VCA1033
VC0488
VCA0904
VC2162
VC0590
VC1824
VC2531
hemolysin secretion ATP-binding protein, putative
hemolysin secretion protein HylB (hylB)
large-conductance mechanosensitive channel (mscL)
LPS/O-antigen transport protein (rfbH)
LPS/O-antigen transport protein (rfbI)
multidrug resistance protein
multidrug resistance protein
multidrug resistance protein D (emrD)
multidrug resistance protein D (emrD)
multidrug resistance protein D (emrD)
multidrug resistance protein NorM, putative
multidrug resistance protein VceA (vceA)
multidrug resistance protein VceB (vceB)
multidrug resistance protein, putative
multidrug resistance protein, putative
multidrug resistance protein, putative
multidrug resistance protein, putative
multidrug resistance protein, putative
multidrug resistance protein, putative
multidrug resistance protein, putative
multidrug transporter, putative
multidrug transporter, putative
RTX toxin transp (rtxD)
RTX toxin transp (rtxB)
thiamin ABC transporter, periplasmic thiamin-binding protein (tbpA)
thiamine ABC transporter, ATP-binding protein, putative
thiamine ABC transporter, permease protein, putative
tolA protein (tolA)
tolB protein (tolB)
tolQ protein (tolQ)
tolR membrane protein (tolR)
toxin secretion ATP-binding protein
toxin secretion transporter, putative
transport ATP-binding protein MsbA (msbA)
vitamin B12 ABC transporter, ATP-binding protein BtuD, putative
vitamin B12 ABC transporter, permease protein BtuC, putative
vitamin B12 receptor (btuB)
Unknown subunitstrate
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein, putative
ABC transporter, periplasmic subunitstrate-binding protein
ABC transporter, periplasmic subunitstrate-binding protein
ABC transporter, periplasmic subunitstrate-binding protein
ABC transporter, periplasmic subunitstrate-binding protein, putative
ABC transporter, permease protein
ABC transporter, permease protein
ABC transporter, permease protein
ABC transporter, permease protein
ABC transporter, permease protein
ABC transporter, permease protein, putative
ABC transporter, permease protein, putative
extracellular solute-binding protein, family 7
extracellular solute-binding protein, putative
extracellular solute-binding protein, putative
permease
permease PerM, putative
permease protein, putative
PTS system, nitrogen reg IIA component
PTS system, nitrogen reg IIA component (ptsN)
VCA0246
VC2283
VC2012
VC1669
VCA0667
VC2705
VC1180
VC1181
VCA0025
VC1314
VC1071
VC0338
VCA0596
SgaT protein (sgaT)
Na+-dependent transporter
Na+-dependent transporter
Na+-dependent transporter
Na+/solute symporter
Na+/solute symporter, putative
transport ATP-binding protein CydC (cydC)
transport ATP-binding protein CydD (cydD)
transporter, NadC family
transporter, putative
transporter, putative
transporter, putative
transporter, putative
VC0452
VCA1018
VC2711
VC0196
VC0167
VC1855
VC1990
VC0012
VC0482
VC1847
VC1814
VCA0057
VC1392
VC2626
VC1258
VC0015
VC0190
VC0971
VC1542
VC0668
VC0345
VC0535
VC0108
VC1212
VC2245
VC0013
VC2502
VC2015
VC0953
VC2233
VC1290
VC0656
VC1054
VC0299
VC0518
VC2343
VC0217
VC1786
VC0852
VC2459
VC1730
VC2043
VC1672
VC1011
VC2360
VC1018
VC1019
VC0394
VC1214
VC1234
VC1860
VC0898
VC2322
VC2320
VC2319
VCA0521
VCA0520
VC0221
VCA0717
VC1846
VC1845
VC0128
VC2419
VCA1017
DNA metabolism
DNA replication, recombination, and repair
A/G-specific adenine glycosylase (mutY)
ada reg protein (ada)
ATP-dependent DNA helicase RecG (recG)
ATP-dependent DNA helicase RecQ (recQ)
ATP-dependent DNA helicase Rep (rep)
ATP-dependent helicase, DinG family
ATP-dependent helicase, DinG family
chromosomal DNA replication initiator DnaA (dnaA)
chromosome initation inhibitor (iciA)
crossover junction endodeoxyribonuclease RuvC (ruvC)
deoxyribodipyrimidine photolyase
deoxyribodipyrimidine photolyase (phrB)
deoxyribodipyrimidine photolyase, putative
DNA adenine methylase (dam)
DNA gyrase, subunit A, (gyrA)
DNA gyrase, subunit B (gyrB)
DNA helicase II (uvrD)
DNA ligase (lig)
DNA ligase (ligA)
DNA mismatch repair protein MutH (mutH)
DNA mismatch repair protein MutL (mutL)
DNA mismatch repair protein MutS (mutS)
DNA polymerase I (polI)
DNA polymerase II (polB)
DNA polymerase III, alpha subunit (dnaE)
DNA polymerase III, beta chain (dnaN)
DNA polymerase III, chi subunit (holC)
DNA polymerase III, delta prime subunit (holB)
DNA polymerase III, delta subunit (holA)
DNA polymerase III, epsilon subunit (dnaQ)
DNA polymerase III, epsilon subunit, putative
DNA polymerase III, psi subunit (holD)
DNA polymerase III, subunits gamma and tau (dnaZX)
DNA polymerase, epsilon subunit, putative
DNA primase (dnaG)
DNA repair protein RadA (radA)
DNA repair protein RadC (radC)
DNA repair protein RadC putative
DNA repair protein RecN (recN)
DNA repair protein RecO (recO)
DNA topoisomerase I (topA)
DNA topoisomerase III (topB)
DNA-3-methyladenine glycosidase I (tag)
endonuclease III (nth)
endonuclease IV (nfo)
excinuclease ABC subunit B
excinuclease ABC subunit B (uvrB)
excinuclease ABC, subunit A (uvrA)
excinuclease ABC, subunit C (uvrC)
exodeoxyribonuclease I (sbcB)
exodeoxyribonuclease III (xth)
exodeoxyribonuclease IX (xni)
exodeoxyribonuclease V, 125 kDa subunit (recC)
exodeoxyribonuclease V, 135 kDa subunit (recB)
exodeoxyribonuclease V, 67 kDa subunit (recD)
exonuclease SbcC, putative
exonuclease SbcD, putative
formamidopyrimidine-DNA glycosylase (mutM)
helicase IV (helD)
Holliday junction DNA helicase RuvA (ruvA)
Holliday junction DNA helicase RuvB (ruvB)
integrase/recombinase XerC (xerC)
integrase/recombinase XerD (xerD)
methylated-DNA--protein-cysteine S-methyltransferase (ogt)
VC2392
VC0331
VC2435
VC0671
VC1302
VC2721
VCA0632
VCA0592
VCA0764
VC1342
VCA0313
VC2678
VC0367
VC1857
VC0543
VC0014
VC1056
VC0371
VC2096
VC0397
VC2417
VCA0291
VC2430
VC2431
VC1886
VC2359
VC2118
VC1769
VC2178
VCA0198
VC1765
VC0766
VC0891
VC0470
VC1130
VC0273
VC2385
VC0305
VCA0805
VC0341
VC0647
VC2234
VC0498
VC2246
VC0210
VC2571
VC0328
VC0329
VC2709
VC0642
VC2267
VC2066
VC0517
VC0150
VC0534
VC2529
VC1045
VC2302
VC2467
VC0323
VC0634
VC2715
VC0307
VC0562
VC0594
VC2742
VC1984
VC2030
VC2461
VC0006
mutator MutT protein (mutT)
MutT/nudix family protein
MutT/nudix family protein
MutT/nudix family protein
MutT/nudix family protein
MutT/nudix family protein
MutT/nudix family protein
MutT/nudix family protein
MutT/nudix family protein
MutT/nudix family protein
MutT/nudix family protein
primosomal protein N` (priA)
primosomal replication protein N (priB)
primosomal replication protein N`` (priC)
recA protein (recA)
RecF protein (recF)
recR protein (recR)
replicative DNA helicase (dnaB)
seqA protein (seqA)
single-strand binding protein (ssb)
single-stranded-DNA-specific exonuclease RecJ (recJ)
site-specific recombinase IntI4 (intI4)
topoisomerase IV, subunit A (parC)
topoisomerase IV, subunit B (parE)
transcription-repair coupling factor (mfd)
uracil-DNA glycosylase (ung)
Restriction/modification
adenine-specific methylase, putative
DNA methylase HsdM, putative
hemK protein (hemK)
site-specific DNA-methyltransferase, putative
type I restriction enzyme HsdR, putative
Degradation of DNA
exodeoxyribonuclease VII, large subunit (xseA)
exodeoxyribonuclease, small subunit (xseB)
extracellular deoxyribonuclease (dns)
Chromosome-associated proteins
DNA-binding protein H-NS (hns)
DNA-binding protein HU (hupA)
Other
RNA-directed DNA polymerase
Transcription
Degradation of RNA
ATP-dependent RNA helicase RhlB (rhlB)
exoribonuclease II (rnb)
oligoribonuclease (orn)
polyribonucleotide nucleotidyltransferase (pnp)
ribonuclease HI (rnhA)
ribonuclease HI, putative
ribonuclease HII (rnhB)
ribonuclease PH (rph)
DNA-dependent RNA polymerase
DNA-directed RNA polymerase, alpha subunit (rpoA)
DNA-directed RNA polymerase, beta subunit (rpoB)
DNA-directed RNA polymerase, beta' subunit (rpoC)
DNA-directed RNA polymerase, omega subunit (rpoZ)
Transcription factors
N utilization subunitstance protein A (nusA)
N utilization subunitstance protein B, (nusB)
RNA polymerase sigma factor for flagellar operon FliA (fliA)
RNA polymerase sigma factor RpoD (rpoD)
RNA polymerase sigma-32 factor (rpoH)
RNA polymerase sigma-38 factor (rpoS)
RNA polymerase sigma-54 factor (rpoN)
RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-E factor (rpoE)
transcription antitermination protein NusG (nusG)
transcription elongation factor GreA (greA)
transcription elongation factor GreB (greB)
transcription termination factor Rho (rho)
RNA processing
16S rRNA processing protein RimM (rimM)
polyA polymerase (pcnB)
ribonuclease BN (rbn)
ribonuclease D (rnd)
ribonuclease E (rne)
ribonuclease III (rnc)
ribonuclease P protein component (rnpA)
VC2599
VC1006
VC0644
VC1128
VC2446
VC1382
VC0601
VC2564
VCA0804
VCA0204
VC1407
VC0660
VCA0768
VCA0990
VCA0061
VC1760
VC2506
VC0159
VC0545
VC2074
VC1297
VC1166
VC1848
VC0997
VC2214
VC0021
VC0020
VC0760
VC0682
VC0956
VC0664
VC2655
VC0045
VC1036
VC1219
VC1220
VC0875
VC0739
VC1110
VCA0287
VC2623
VC0465
VC0631
VC2503
VC1919
VC0325
VC0326
VC0324
VC0293
VC0570
VC2586
VC2577
VC2589
VC2570
VC2580
VC0564
VC2593
VCA0290
VC0435
VC2591
VC2594
VC2585
VC1640
VC0436
VC0218
VC2588
VC2596
VC2578
VC2679
VC2025
VC0219
VC0007
VCA0289
VC2575
VC0879
ribonuclease R (vacB)
ribonuclease T (rnt)
ribosome-binding factor A (rbfA)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (trmU)
tRNA nucleotidyltransferase (cca)
Other
ATP-dependent helicase HrpA (hrpA)
ATP-dependent helicase HrpB (hrpB)
ATP-dependent RNA helicase DbpA (dbpA)
ATP-dependent RNA helicase DeaD (deaD)
ATP-dependent RNA helicase RhlE (rhlE)
ATP-dependent RNA helicase RhlE (rhlE)
ATP-dependent RNA helicase SrmB (srmB)
ATP-dependent RNA helicase, DEAD box family
ATP-dependent RNA helicase, DEAD box family
ATP-dependent RNA helicase, DEAD box family
helicase, putative
RNA polymerase-associated protein HepA (hepA)
RNA-binding protein
Protein synthesis
tRNA aminoacylation
alanyl-tRNA synthase (alaS)
arginyl-tRNA synthase (argS)
asparaginyl-tRNA synthase (asnS)
aspartyl-tRNA synthase (aspS)
cysteinyl-tRNA synthase (cysS)
glutaminyl-tRNA synthase (glnS)
glutamyl-tRNA synthase (gltX)
glycyl-tRNA synthase, alpha chain (glyQ)
glycyl-tRNA synthase, beta chain (glyS)
histidyl-tRNA synthase (hisS)
isoleucyl-tRNA synthase (ileS)
leucyl-tRNA synthase (leuS)
lysyl-tRNA synthase, heat inducible (lysU)
lysyl-tRNA synthase-related protein (yjeA)
methionyl-tRNA formyltransferase (fmt)
methionyl-tRNA synthase (metG)
phenylalanyl-tRNA synthase, alpha chain (pheS)
phenylalanyl-tRNA synthase, beta chain (pheT)
prolyl-tRNA synthase (proS)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA)
seryl-tRNA synthase (serS)
threonyl-tRNA synthase (thrS)
tryptophanyl-tRNA synthase (trpS)
tyrosyl-tRNA synthase (tyrS)
tyrosyl-tRNA synthase (tyrS)
valyl-tRNA synthase (valS)
Nucleoproteins
DNA-binding protein HU-beta (hupB)
Ribosomal proteins: synthesis and modification
ribosomal protein L1 (rplA)
ribosomal protein L10 (rplJ)
ribosomal protein L11 (rplK)
ribosomal protein L11 methyltransferase (prmA)
ribosomal protein L13 (rplM)
ribosomal protein L14 (rplN)
ribosomal protein L15 (rplO)
ribosomal protein L16 (rplP)
ribosomal protein L17 (rplQ)
ribosomal protein L18 (rplR)
ribosomal protein L19 (rplS)
ribosomal protein L2 (rplB)
ribosomal protein L20 (rplT)
ribosomal protein L21 (rplU)
ribosomal protein L22 (rplV)
ribosomal protein L23 (rplW)
ribosomal protein L24 (rplX)
ribosomal protein L25 (rplY)
ribosomal protein L27 (rpmA)
ribosomal protein L28 (rpmB)
ribosomal protein L29 (rpmC)
ribosomal protein L3 (rplC)
ribosomal protein L30 (rpmD)
ribosomal protein L31 (rpmE)
ribosomal protein L32 (rpmF)
ribosomal protein L33 (rpmG)
ribosomal protein L34 (rpmH)
ribosomal protein L35 (rpmI)
ribosomal protein L36 (rpmJ)
ribosomal protein L36, putative
VC2595
VC2584
VC2581
VC0327
VC0369
VC1915
VC2597
VC2573
VC0359
VC2574
VC2583
VC0646
VC0561
VC2587
VC0368
VC2592
VC2260
VC0679
VC0520
VC2590
VC2572
VC2579
VC0366
VC2281
VC0360
VC2582
VC0571
VC0878
VC1309
VC0657
VC1889
VC2184
VC0848
ribosomal protein L4 (rplD)
ribosomal protein L5 (rplE)
ribosomal protein L6 (rplF)
ribosomal protein L7/L12 (rplL)
ribosomal protein L9 (rplI)
ribosomal protein S1 (rpsA)
ribosomal protein S10 (rpsJ)
ribosomal protein S11 (rpsK)
ribosomal protein S12 (rpsL)
ribosomal protein S13 (rpsM)
ribosomal protein S14 (rpsN)
ribosomal protein S15 (rpsO)
ribosomal protein S16 (rpsP)
ribosomal protein S17 (rpsQ)
ribosomal protein S18 (rpsR)
ribosomal protein S19 (rpsS)
ribosomal protein S2 (rpsB)
ribosomal protein S20 (rpsT)
ribosomal protein S21 (rpsU)
ribosomal protein S3 (rpsC)
ribosomal protein S4 (rpsD)
ribosomal protein S5 (rpsE)
ribosomal protein S6 (rpsF)
ribosomal protein S6 modification protein (rimK)
ribosomal protein S7 (rpsG)
ribosomal protein S8 (rpsH)
ribosomal protein S9 (rpsI)
ribosomal protein, L31P family
ribosomal-protein-alanine acetyltransferase (rimJ)
ribosomal-protein-alanine acetyltransferase (rimI)
ribosomal-protein-serine acetyltransferase, putative
tRNA and rRNA base modification
pseudouridine synthase family 1 protein
pseudouridine synthase family 1 protein
pseudouridine synthase family 1 protein
pseudouridine synthase Rlu family protein
pseudouridine synthase Rlu family protein
queuine tRNA-ribosyltransferase (tgt)
ribosomal large subunit pseudouridine synthase A (rluA)
ribosomal large subunit pseudouridine synthase A (rluA)
ribosomal large subunit pseudouridine synthase C (rluC)
ribosomal large subunit pseudouridine synthase D (rluD)
ribosomal small subunit pseudouridine synthase A
RNA methyltransferase, TrmH family
RNA methyltransferase, TrmH family
RNA methyltransferase, TrmH family
rRNA (guanine-N1-)-methyltransferase (rrmA)
rRNA methylase, putative
rRNA methylase, SpoU family
TrmA family RNA methyltransferase, putative
TrmA family RNA methyltransferase, putative
tRNA (guanine-N1)-methyltransferase (trmD)
tRNA (uracil-5-)-methyltransferase (trmA)
tRNA delta(2)-isopentenylpyrophosphate transferase (miaA)
tRNA pseudouridine 55 synthase (truB)
tRNA pseudouridine synthase A (truA)
tRNA-(MS[2]IO[6]A)-hydroxylase (miaE)
Translation factors
elongation factor G (fusA)
elongation factor G (fusA)
elongation factor P (efp)
elongation factor P family protein
elongation factor Ts (tsf)
elongation factor Tu (tufB)
elongation factor TU (tufA)
initiation factor IF-1 (infA)
initiation factor IF-2 (infB)
initiation factor IF3, (infC)
peptide chain release factor 1 (prfA)
peptide chain release factor 2 (prfB)
peptide chain release factor 3 (prfC)
ribosome modulation factor (rmf)
ribosome recycling factor (frr)
Other
peptidyl-tRNA hydrolase (pth)
small protein B (smpB)
VC0147
Protein fate
Protein and peptide secretion and trafficking
cell division protein FtsY (ftsY)
VC2223
VC1140
VC1179
VC0888
VC1668
VC0741
VC2505
VCA0104
VC2028
VC0709
VC1635
VC0746
VC0803
VC2598
VC2003
VCA0627
VC2695
VC2452
VCA0929
VC0563
VC0154
VC0346
VC0645
VC0999
VC1910
VC2342
VC0361
VC2660
VC1209
VC2259
VC0321
VC0362
VC1737
VC0643
VCA0288
VC2179
VC0663
VC0659
VC1484
VC2257
VC2445
VC2444
VC2734
VC2733
VC2732
VC2731
VC2730
VC2729
VC2728
VC2727
VC2726
VC2725
VC2723
VC2426
VC0839
VC0683
VC1107
VC2436
VC1565
VC2394
VC0322
VC0640
VC2576
VC0743
VCA0693
VC0744
VCA0692
VC2653
VCA1080
VC2462
VC0560
VC0086
VCA0533
VC0958
VC2261
VC2549
VC0046
VCA0150
VC0674
VC0532
VC0018
VC0752
VC0751
VCA0819
VC2665
VC2664
VCA0820
VC1902
VC0856
VC0855
VC1386
VC0854
VC0985
VCA0222
VC2299
VC1849
VCA0953
VC0354
VC0684
VC2568
VC2604
VC1918
VC1393
VC0445
VC0034
VC2418
VC1923
VC0157
VC2279
VCA0813
VC2501
VC1494
VC0067
VC1144
VC1921
VC1922
VC1920
general secretion pathway protein A (exeA)
general secretion pathway protein B, putative
general secretion pathway protein C (epsC)
general secretion pathway protein D, (gspD)
general secretion pathway protein E (epsE)
general secretion pathway protein F (epsF)
general secretion pathway protein G (epsG)
general secretion pathway protein H (epsH)
general secretion pathway protein I (epsI)
general secretion pathway protein J (epsJ)
general secretion pathway protein K, (epsK)
general secretion pathway protein L (epsL)
general secretion pathway protein N (epsN)
leader peptidase PilD (pilD)
leader peptidase TcpJ (tcpJ)
lipoprotein signal peptidase (lspA)
outer membrane lipoproteins carrier protein (lolA)
outer membrane protein TolC (tolC)
outer membrane protein TolC, putative
preprotein translocase, SecA subunit (secA)
preprotein translocase, SecE subunit (secE)
preprotein translocase, SecG subunit (secG)
preprotein translocase, SecY subunit (secY)
protein-export membrane protein SecD (secD)
protein-export membrane protein SecD (secD)
protein-export membrane protein SecF (secF)
protein-export membrane protein SecF (secF)
protein-transport protein SecB (secB)
secretion protein, HlyD family
signal peptidase I (lepB)
signal recognition particle protein (ffh)
tatA protein (tatA)
tatA protein (tatA)
Protein modification and repair
apolipoprotein N-acyltransferase (cutE)
methionine aminopeptidase (map)
peptide methionine sulfoxide reductase (msrA)
polypeptide deformylase (def)
polypeptide deformylase (def)
prolipoprotein diacylglyceryl transferase (lgt)
protein-L-isoaspartate O-methyltransferase (pcm)
Protein folding and stabilization
16 kDa heat shock protein A (ibpA)
chaperone protein HscA (hscA)
chaperone protein HscB (hscB)
chaperonin, 10 Kd subunit (groES)
chaperonin, 10 Kd subunit (groES)
chaperonin, 60 Kd subunit (groEL)
chaperonin, 60 Kd subunit (groEL)
disulfide bond formation protein B (dsbB)
dnaJ protein (dnaJ)
dnaK protein (dnaK)
heat shock protein 70 family protein
heat shock protein GrpE (grpE)
heat shock protein HtpG (htpG)
lipase activator protein, putative
peptidyl-prolyl cis-trans isomerase A (ppiA)
peptidyl-prolyl cis-trans isomerase B (ppiB)
peptidyl-prolyl cis-trans isomerase C (ppiC)
peptidyl-prolyl cis-trans isomerase, FKBP-type (fkpA)
peptidyl-prolyl cis-trans isomerase, FKBP-type (fkpB)
peptidyl-prolyl cis-trans isomerase, FKBP-type (fklB)
peptidyl-prolyl cis-trans isomerase, FKBP-type (slyD)
peptidyl-prolyl cis-trans isomerse D (ppiD)
sugE protein (sugE)
survival protein SurA (surA)
thiol:disulfide interchange protein (tpcG)
thiol:disulfide interchange protein DsbC (dsbC)
trigger factor (tig)
Degradation of proteins, peptides, and glycopeptides
alkaline serine exoprotease A (proA)
aminoacyl-histidine dipeptidase (pepD)
aminopeptidase
aminopeptidase A/I (pepA)
aminopeptidase N (pepN)
aminopeptidase P
ATP-dep Clp protease, ATP-binding subunit ClpA (clpA)
ATP-dep Clp protease, ATP-binding subunit ClpX (clpX)
ATP-dep Clp protease, proteolytic subunit (clpP)
ATP-dep protease LA (lon)
VC0711
VCA0116
VC1650
VC0350
VC0349
VC1735
VC0521
VC0188
VC0755
VCA0180
VC2072
VC1343
VC1983
VCA0223
VC0565
VC0566
VC2674
VC2675
VCA0063
VC1994
VC0554
VC0652
VC0717
VCA0803
VC1060
VC1496
VC1414
VC1649
VC1200
VC1709
clpB protein (clpB)
clpB protein (clpB)
collagenase (vcc)
hflC protein (hflC)
hflK protein (hflK)
leucyl/phenylalanyl-tRNA--protein transferase (aat)
O-sialoglycoprotein endopeptidase, (gcp)
oligopeptidase A (prlC)
peptidase B (pepB)
peptidase T (pepT)
peptidase, insulinase family
peptidase, M20A family
peptidase, putative
protease (prtV)
protease DegS (degS)
protease DO (htrA)
protease HslVU, ATPase subunit HslU (hslU)
protease HslVU, subunit HslV (hslV)
protease II (ptrB)
protease IV (sppA)
protease, insulinase family/protease, insulinase family
protease, putative
protease, putative
serine protease, putative
sohB protein, peptidase U7 family
tail-specific protease (prc)
thermostable carboxypeptidase 1
trypsin, putative
trypsin, putative
Zn protease, insulinase family
VC0122
VC2368
VC2516
VCA1087
VC0431
VC1815
VC1925
VCA0141
VC1926
VCA0142
VC0548
VC0984
VCA0184
VCA0933
VCA0166
VC1142
VC2433
VC2614
VCA0135
VC1907
VCA0876
VC1320
VCA0532
VCA1105
VC1638
VC0719
VC1719
VC0596
VC0290
VC1900
VC2106
VCA0519
VC1434
VC0289
VC1553
VCA0964
VC2159
VC2744
VC0583
VC0720
VC1206
VC0347
VC1222
VC1914
VC0474
VC1904
VC0092
Regulatory functions
Other
adenylate cyclase (cyaA)
aerobic respiration control protein ArcA (arcA)
anti-sigma B factor antagonist, putative
anti-sigma F factor antagonist, putative
arginine repressor (argR)
C-factor, putative
C4-dicarboxylate transport sensor protein (dctB)
C4-dicarboxylate transport sensor protein, putative (dctB)
C4-dicarboxylate transport transcriptional reg protein (dctD)
C4-dicarboxylate transport transcriptional reg protein (dctD)
carbon storage regulator (csrA)
cholera toxin transcriptional activator (toxR)
cold shock DNA-binding domain protein 7
cold shock domain family protein
cold shock transcriptional reg CspA (cspA)
cold shock-like protein CspD (cspD)
cyclic AMP phosphodiesterase (cpdA)
cyclic AMP receptor protein
cyclic nucleotide binding protein, putative
cys regulon transcriptional activator (cysB)
D-serine deaminase activator (dsdC)
DNA-binding response regulator
DNA-binding response regulator
DNA-binding response regulator
DNA-binding response regulator
DNA-binding response reg PhoB (phoB)
DNA-binding response reg TorR (torR)
dnaK suppressor protein (dksA)
factor-for-inversion stimulation protein (fis)
fatty acid metabolism reg protein (fadR)
ferric uptake reg protein (fur)
fructose repressor (fruR)
fumarate and nitrate reduction reg protein, (fnr)
gluconate utilization system gnt-I transcriptional repressor (gntR)
glycerol-3-phosphate regulon repressor (glpR)
glycine cleavage operon activator, putative
glycine cleavage system transcriptional repressor, putative
GTP-binding protein TypA (typA)
hemagglutinin/protease reg protein
histidine protein kinase PhoR (phoR)
histidine utilization repressor (hutC)
host factor-I, putative
integration host factor, alpha subunit (himA)
integration host factor, beta subunit (hipB)
Fe-regulated virulence reg protein IrgB (irgB)
leucine-responsive reg protein (lrp)
LexA repressor (lexA)
VC1021
VCA0737
VCA0011
VCA1047
VC2682
VC0993
VC2204
VCA0674
VCA0675
VC2748
VC2749
VC0606
VC2713
VCA0710
VC1070
VC0727
VC2533
VCA0705
VCA0706
VCA0704
VC2070
VC1057
VC1679
VC2415
VCA0607
VC0330
VC0544
VC0983
VCA0684
VCA0707
VCA0600
VC0693
VC1050
VC1157
VC1604
VC1082
VCA0189
VC1081
VC1086
VC1155
VC1348
VC1087
VCA1086
VCA0850
VC1652
VC1651
VCA0210
VCA0132
VCA0719
VC1831
VC1276
VC1088
VC1319
VC1521
VC1085
VCA0531
VCA0238
VCA0565
VC1156
VC1639
VCA0257
VC0303
VC1315
VC2369
VCA0736
VC2453
VC1445
VCA0522
VC0791
VC1605
VC2693
VCA0709
VCA0683
VC2136
VCA0211
VC1084
VC1349
VC0622
VC1653
VC0072
LuxO repressor protein (luxO)
luxP protein (luxP)
malT reg protein (malT)
mannitol operon repressor (mtlR)
met repressor (metJ)
N-acetylglucosamine repressor (nagC)
negative reg of flagellin synthesis FlgM, putative
nitrate/nitrite response reg NarP (narP)
nitrate/nitrite sensor protein NarQ (narQ)
nitrogen reg protein (ntrB)
nitrogen reg protein NR(I) (ntrC)
nitrogen reg protein PII (glnB)
osmolarity sensor protein EnvZ (envZ)
periplasmic protein TorT
phosphatase, putative
phosphate transport system reg protein PhoU (phoU)
phosphocarrier protein NPr (ptsO)
phosphoglycerate transport reg protein PgtB, putative
phosphoglycerate transport reg protein PgtC, putative
phosphoglycerate transport system transcriptional reg protein PgtA
phosphohistidine phosphatase (sixA)
proteinase inhibitor, putative
psp operon transcriptional activator (pspF)
pyruvate dehydrogenase complex repressor (pdhR)
reg of nucleoside diphosphate kinase
reg of sigma D (rsd)
reg protein RecX (recX)
reg protein ToxS (toxS)
reg protein UhpC (uhpC)
reg protein UhpC, putative
repressor protein PhnR, putative
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator
response regulator VieA (vieA)
response regulator VieB (vieB)
response regulator, putative
ribose operon repressor (rbsR)
sensor histide kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase
sensor histidine kinase ArcB (arcB)
sensor histidine kinase LuxQ (luxQ)
sensor histidine kinase/response regulator
sensor histidine kinase/response regulator
sensor histidine kinase/response regulator
sensor kinase citA
sensor kinase citA, putative
sensor protein CpxA (cpxA)
sensor protein TorS (torS)
sensor protein UhpB (uhpB)
sensory box sensor histidine kinase
sensory box sensor histidine kinase
sensory box sensor histidine kinase
sensory box sensor histidine kinase/response regulator
sensory box sensor histidine kinase/response regulator
sensory box sensor histidine kinase/response reg VieS (vieS)
sensory box/GGDEF family protein
VC2370
VCA0697
VCA0939
VC1522
VC2135
VC2137
VC0665
VCA0182
VC1817
VCA0117
VC0706
VC2530
VC2466
VC2465
VC2464
VCA0084
VC0471
VCA0654
VC0597
VC0838
VC0278
VC0678
VC0161
VC1706
VC0677
VC0990
VC2301
VC0333
VC1825
VC0497
VC1785
VCA0256
VCA0239
VCA0566
VC0071
VC0790
VC2692
VC2275
VC2714
VC1308
VCA0682
VC0513
VC1076
VCA0937
VCA0266
VC2080
VC0192
VC1260
VCA0926
VCA1001
VCA0231
VCA1074
VC1068
VCA0642
VC1062
VC1713
VCA1068
VC0486
VCA0940
VCA0247
VC1335
VCA0871
VC1968
VCA0279
VC1286
VC1557
VC2337
VCA0673
VC1721
VC0396
VC1213
VC1277
VCA0952
VCA1078
VC0464
VC2702
VCA0888
VC0896
VC1580
VC2324
sensory box/GGDEF family protein
sensory box/GGDEF family protein
sensory box/GGDEF family protein
sigma-54 dep response regulator
sigma-54 dep response regulator
sigma-54 dep transcriptional activator
sigma-54 dep transcriptional regulator
sigma-54 dep transcriptional regulator
sigma-54 dep transcriptional regulator
sigma-54 dep transcriptional regulator
sigma-54 modulation protein, putative
sigma-54 modulation protein, putative
sigma-E factor negative reg protein RseA (rseA)
sigma-E factor reg protein RseB (rseB)
sigma-E factor reg protein RseC (rseC)
soxR protein (soxR)
sprT protein, putative
sucrose operon repressor ScrR, putative
sugar fermentation stimulation protein (sfsA)
TCP pilus virulence reg protein (tcpN)
transcriptional activator CadC, putative
transcriptional activator HlyU (hlyU)
transcriptional activator IlvY (ilvY)
transcriptional activator MetR (metR)
transcriptional activator protein NhaR (nhaR)
transcriptional activator RfaH, putative
transcriptional activator, putative
transcriptional reguator, TetR family
transcriptional regulator
transcriptional regulator
transcriptional regulator
transcriptional regulator
transcriptional regulator
transcriptional regulator
transcriptional regulator AsnC (asnC)
transcriptional regulator CitB (citB)
transcriptional regulator CpxR (cpxR)
transcriptional regulator Crl (crl)
transcriptional regulator OmpR, (ompR)
transcriptional regulator TyrR
transcriptional regulator UhpA (uhpA)
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, AraC/XylS family
transcriptional regulator, ArsR family
transcriptional regulator, ArsR family
transcriptional regulator, AsnC family
transcriptional regulator, AsnC family
transcriptional regulator, AsnC family
transcriptional regulator, DeoR family
transcriptional regulator, DeoR family
transcriptional regulator, DeoR family
transcriptional regulator, GntR family
transcriptional regulator, GntR family
transcriptional regulator, HTH_3 family
transcriptional regulator, HTH_3 family
transcriptional regulator, LacI family
transcriptional regulator, LacI family
transcriptional regulator, LacI family
transcriptional regulator, LacI family
transcriptional regulator, LacI family
transcriptional regulator, LuxR family
transcriptional regulator, LuxR family
transcriptional regulator, LuxR family
transcriptional regulator, LuxR family
transcriptional regulator, LuxR family
transcriptional regulator, LuxR family
transcriptional regulator, LuxR family
transcriptional regulator, LuxR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
VC2760
VC0068
VC0781
VC0787
VC2485
VC1561
VC1617
VC2103
VCA0542
VCA0575
VCA0635
VC2636
VCA0756
VCA0830
VCA0833
VC1588
VC1955
VC2383
VC1049
VC1947
VC1390
VCA0889
VCA0982
VCA0991
VCA1020
VCA1055
VCA0082
VCA1058
VC0732
VC1278
VCA1005
VCA0955
VC0649
VC0277
VC0974
VCA0056
VC0814
VC1795
VC1809
VC0176
VCA0147
VC1118
VCA0264
VCA0029
VC2007
VCA0621
VC0152
VC0214
VC1746
VC1408
VCA0767
VCA0999
VC0166
VCA0917
VC1741
VC2489
VC2677
VC0909
VC0701
VC2166
VC0378
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, LysR family
transcriptional regulator, MarR family
transcriptional regulator, MarR family
transcriptional regulator, MarR family
transcriptional regulator, MarR family
transcriptional regulator, MerR family
transcriptional regulator, MerR family
transcriptional regulator, MerR family
transcriptional regulator, putative
transcriptional regulator, putative
transcriptional regulator, putative
transcriptional regulator, putative
transcriptional regulator, putative
transcriptional regulator, putative
transcriptional regulator, putative
transcriptional regulator, putative
transcriptional regulator, ROK family
transcriptional regulator, SorC family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional regulator, TetR family
transcriptional repressor, LacI family
trehalose operon repressor (treR)
trp operon repressor, putative
Trp repressor-binding protein (wrbA)
Zn uptake reg protein, putative
VC0124
VC1962
VCA0406
VCA0443
VCA0317
VCA0350
VC1537
VC0533
VC0905
VC1195
VC0581
VC2298
VC2156
VCA0059
VC2181
VC1987
Cell envelope
Lipoproteins
lipopeptide (lppL)
lipoprotein
lipoprotein Blc (blc)
lipoprotein Blc (blc)
lipoprotein Blc (blc)
lipoprotein Blc (blc)
lipoprotein NlpC (nlpC)
lipoprotein NlpD (nlpD)
lipoprotein YaeC (yaeC)
lipoprotein, putative
lipoprotein, putative
lipoprotein, putative
lipoprotein-34 NlpB (nlpB)
major outer membrane lipoprotein (lpp)
outer membrane lipoprotein LolB (lolB)
outer membrane lipoprotein Slp, putative
VC1835
VC0948
VC0954
VC2048
VC2630
VC0857
VC2634
VC2633
VC2632
VC2631
VC2423
VC2425
VC0502
VC0858
VC0861
VC2424
peptidoglycan-associated lipoprotein (pal)
rare lipoprotein A, putative
rare lipoprotein B (rlpB)
vacJ lipoprotein (vacJ)
Surface structures
fimbrial assembly protein (pilQ)
fimbrial assembly protein PilE, putative
fimbrial assembly protein PilM, putative
fimbrial assembly protein PilN, putative
fimbrial assembly protein PilO, putative
fimbrial assembly protein PilP, putative
fimbrial protein (pilA)
type IV pilin biogenesis protein PilC (pilC)
type IV pilin, putative
type IV pilin, putative
type IV pilin, putative
type IV pilus assembly protein PilB (pilB)
Biosynthesis of murein sacculus and peptidoglycan
alanine racemase, biosynthetic (alr)
alanine racemase, putative
D-alanine--D-alanine ligase (ddlA)
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase (dacA)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
VC0372
VC1312
VCA0572
VC0947
VCA0270
VC0632
(dacB)
VCA0870 D-alanyl-D-alanine endopeptidase (pbpG)
VC0158
glutamate racemase (murI)
VC2635
penicillin-binding protein 1A (mrcA)
VC0602
penicillin-binding protein 1B (mrcB)
VC0950
penicillin-binding protein 2 (mrdA)
VC2407
penicillin-binding protein 3 (ftsI)
VC2404
phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY)
VC0318
UDP-N-acetylenolpyruvoylglucosamine reductase (murB)
VC2514
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA)
VC2401
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (murG)
VC2400
UDP-N-acetylmuramate--alanine ligase (murC)
VC2542
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-mesodiaminopimelate ligase (mpl)
VC2403
UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD)
VC2406
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
(murE)
VC2405
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanylD-alanyl ligase (murF)
Biosynthesis and degradation of surface polysaccarides and lipopolysaccharides
VC2175
2-dehydro-3-deoxyphosphooctonate aldolase (kdsA)
VC0233
3-deoxy-D-manno-octulosonic-acid transferase (kdtA)
VC1875
3-deoxy-manno-octulosonate cytidylyltransferase (kdsB)
VC2248
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase
(lpxA)
VC0236
ADP-heptose--LPS heptosyltransferase II (rfaF)
VC0223
ADP-heptose--LPS heptosyltransferase II, putative
VC0240
ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD)
VC0924
capK protein, putative
VC0934
capsular polysaccharide biosynthesis glycosyltransferase, putative
VC0920
exopolysaccharide biosynthesis protein EpsF, putative
VC0937
exopolysaccharide biosynthesis protein, putative
VC0263
galactosyl-transferase, putative
VC0243
GDP-mannose 4,6-dehydratase (rfbD)
VC0212
lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase (msbB)
VC0213
lipid A biosynthesis lauroyl acyltransferase (htrB)
VC2247
lipid-A-disaccharide synthase (lpxB)
VC0224
LPS biosynthesis glycosyltransferase, putative
VC0259
LPS biosynthesis protein RfbV (rfbV)
VC0235
LPS biosynthesis protein, putative
VC0225
LPS biosynthesis protein, putative
VC0222
LPS core biosynthesis protein KdtB (kdtB)
VC1956
lytic murein transglycosylase, putative
VC0241
mannose-1-phosphate guanylyltransferase (rfbA)
VC0260
mannosyl-transferase (rfbU)
VC2312
membrane-bound lytic murein transglycosylase A (mltA)
VC0450
membrane-bound lytic murein transglycosylase C (mltC)
VC2237
membrane-bound lytic murein transglycosylase D (mltD)
VC0344
N-acetylmuramoyl-L-alanine amidase (amiB)
VC1776
N-acetylneuraminate lyase, putative
VC0244
perosamine synthase (rfbE)
VC2230
phosphoheptose isomerase (lpcA)
VC0579
phosphoheptose isomerase, putative
VC0925
polysaccharide biosynthesis protein, putative
VC0921
polysaccharide export protein, putative
VC0255
VC0700
VC0866
VC2250
VC2396
VCA0780
VC0927
VC0918
VC0917
VC2762
VC0430
VCA0144
VC0004
VC2213
VC2251
VC2305
VC0633
VC1318
VCA0867
VCA1008
VC1622
VC1674
VC1756
VC1186
VC2252
VC0148
VC2398
VC0637
VC0636
VC1903
VC2408
VC2676
VC2399
VC2402
VC0149
VC2397
VC1714
VC0970
VC1961
VC0419
VC0418
VC2242
VC2773
VCA1115
VC2061
VC2772
VCA1114
VC1959
VC1960
VC2198
VC2063
VCA1095
VC1397
VCA1090
VC1602
VC2202
VC2006
VCA0954
VCA1096
VC2065
VC1398
VC1395
VC1316
VC2064
VC1399
VCA1091
VC2201
VC0892
VC0893
VC1612
VC2131
VC2200
VC2199
VC2196
VC2195
rfbT protein
soluble lytic murein transglycosylase, (slt)
transglycosylase, Slt family
UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase (firA)
UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase (envA)
UDP-glucose 6-dehydrogenase (ugd)
UDP-N-acetyl-D-mannosamine transferase (cpsF)
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (epsD)
UDP-N-acetylglucosamine 2-epimerase (wecB)
UDP-N-acetylglucosamine pyrophosphorylase (glmU)
Other
immunogenic protein
immunogenic protein
inner membrane protein, 60 kDa (yidC)
outer membrane protein OmpA (ompA)
outer membrane protein OmpH (ompH)
outer membrane protein OmpK (ompK)
outer membrane protein OmpU (ompU)
outer membrane protein OmpV (ompV)
outer membrane protein OmpW (ompW)
outer membrane protein, putative
outer membrane protein, putative
periplasmic linker protein, putative
periplasmic linker protein, putative
sanA protein (sanA)
surface antigen
Cellular processes
Cell division
cell division ATP-binding protein FtsE (ftsE)
cell division protein FtsA (ftsA)
cell division protein FtsH (ftsH)
cell division protein FtsJ (ftsJ)
cell division protein FtsK, putative
cell division protein FtsL (ftsL)
cell division protein FtsN, putative
cell division protein FtsQ (ftsQ)
cell division protein FtsW (ftsW)
cell division protein FtsX (ftsX)
cell division protein FtsZ (ftsz)
cell division protein MukB (mukB)
cell division protein ZipA (zipA)
cell division topological specificity factor (minE)
cytoplasmic axial filament protein (cafA)
maf protein (maf)
mesJ protein (mesJ)
ParA family protein
ParA family protein
ParA family protein
ParB family protein
ParB family protein
septum site-determining protein MinC (minC)
septum site-determining protein MinD (minD)
Chemotaxis and motility
basal-body rod modification protein FlgD (flgD)
chemotaxis protein CheA (cheA)
chemotaxis protein CheA (cheA)
chemotaxis protein CheA (cheA)
chemotaxis protein CheD, putative
chemotaxis protein CheV (cheV)
chemotaxis protein CheV (cheV)
chemotaxis protein CheV (cheV)
chemotaxis protein CheV, putative
chemotaxis protein CheY (cheY)
chemotaxis protein CheY (cheY)
chemotaxis protein CheY (cheY)
chemotaxis protein CheY (cheY)
chemotaxis protein CheY, putative
chemotaxis protein CheZ (cheZ)
chemotaxis protein methyltransferase CheR (cheR)
chemotaxis protein methyltransferase CheR (cheR)
chemotaxis protein methyltransferase CheR (cheR)
chemotaxis protein PomA (pomA)
chemotaxis protein PomB (pomB)
fimbrial biogenesis and twitching motility protein, putative
flagellar assembly protein FliH, putative
flagellar basal-body rod protein FlgB (flgB)
flagellar basal-body rod protein FlgC (flgC)
flagellar basal-body rod protein FlgF (flgF)
flagellar basal-body rod protein FlgG (flgG)
VC2069
VC2120
VC2068
VC2123
VC2122
VC2121
VC2197
VC2190
VC2191
VC2140
VC2134
VC2128
VC2194
VC2133
VC2132
VC2126
VC2125
VC2193
VC2192
VC2129
VC0097
VC2127
VC2124
VC2138
VC2203
VC2139
VC2188
VC2142
VC2187
VC2143
VC2144
VC2141
VC2130
VC0514
VC0098
VC0449
VC0512
VC1405
VC1406
VC1898
VCA0906
VCA0979
VCA0068
VCA1092
VC1298
VCA0658
VCA0988
VCA1056
VC1394
VCA0864
VC0282
VC1403
VC1868
VC0216
VC1248
VC1289
VC1313
VC1413
VC1535
VC1643
VC1859
VC1967
VC2439
VCA1088
VCA0663
VCA0773
VCA0923
VCA0974
VCA1034
VCA1069
VCA0008
VCA0031
VCA0176
VCA0268
VCA1031
VC2161
VC1401
VC2062
VCA1089
VC2059
flagellar biosynthetic protein FlhA (flhA)
flagellar biosynthetic protein FlhB (flhB)
flagellar biosynthetic protein FlhF, putative
flagellar biosynthetic protein FliP (fliP)
flagellar biosynthetic protein FliQ (fliQ)
flagellar biosynthetic protein FliR (fliR)
flagellar hook protein FlgE (flgE)
flagellar hook-associated protein FlgL (flgL)
flagellar hook-associated protein FlgM (flgM)
flagellar hook-associated protein FliD (fliD)
flagellar hook-basal body complex protein FliE (fliE)
flagellar hook-length control protein FliK, putative
flagellar L-ring protein FlgH (flgH)
flagellar M-ring protein FliF (fliF)
flagellar motor switch protein FliG (fliG)
flagellar motor switch protein FliM (fliM)
flagellar motor switch protein FliN (fliN)
flagellar P-ring protein FlgI (flgI)
flagellar protein FlgJ (flgJ)
flagellar protein FliJ, putative
flagellar protein FliL, putative
flagellar protein FliL, putative
flagellar protein FliO (fliO)
flagellar protein FliS (fliS)
flagellar protein, putative
flagellar rod protein FlaI, putative
flagellin core protein A (flaA)
flagellin FlaB (flaB)
flagellin FlaC (flaC)
flagellin FlaD (flaD)
flagellin FlaE (flaE)
flagellin FlaG (flaG)
flagellum-specific ATP synthase FliI (fliI)
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
methyl-accepting chemotaxis protein
protein-glutamate methylesterase CheB (cheB)
protein-glutamate methylesterase CheB (cheB)
protein-glutamate methylesterase CheB (cheB)
purine-binding chemotaxis protein CheW (cheW)
VCA1093
VCA1094
VC1402
VC2601
VC1008
VC0462
VC0463
VC0731
VC1350
VC2165
VC1585
VC1560
VCA1006
VC0446
VC2637
VC1583
VC2045
VC2694
VC0003
VC2421
VC2300
VCA0253
VC2209
VC1003
VC1670
VCA0300
VC0443
VC0685
VCA0439
VCA0337
VC1715
VC1716
VC2535
VCA0387
VC0526
VC1459
VC0844
VC0840
VC0841
VC1621
VC1457
VC1456
VC2724
VC0984
VC1461
VCA0646
VC0489
VCA0446
VCA0447
VCA0219
VCA0865
VCA0594
VC0558
VC0040
VC0959
VCA0837
VC0578
VC2426
VC0839
VC0405
VC0407
VC0406
VC0398
VC0399
VC0400
VC0401
VC0402
VC0403
VC0404
VC0409
VC0408
VC0410
VC0411
VCA0615
VC1450
VC1451
VC0824
purine-binding chemotaxis protein CheW (cheW)
purine-binding chemotaxis protein CheW (cheW)
purine-binding chemotaxis protein Chew, putative
Na+-type flagellar protein MotX (motX)
Na+-type flagellar protein MotY (motY)
twitching motility protein PilT (pilT)
twitching motility protein PilT (pilT)
Detoxification
antioxidant, AhpC/Tsa family
antioxidant, putative
arsenate reductase (arsC)
catalase (katB)
catalase/peroxidase (katG)
organic hydroperoxide resistance protein, putative
organic solvent tolerance protein (imp)
peroxiredoxin family protein/glutaredoxin
superoxide dismutase, Cu-Zn (sodC)
superoxide dismutase, Fe (sodB)
superoxide dismutase, Mn (sodA)
thiophene and furan oxidation protein ThdF (thdF)
Toxin production and resistance
ampD protein (ampD)
ampG protein, putative
antibiotic acetyltransferase
antibiotic synthase, putative
bacteriocin production protein
cardiolipin synthase (cls)
chloramphenicol acetyltransferase (cat)
dimethyladenosine transferase (ksgA)
lytB protein (lytB)
microcin immunity protein MccF (mccF)
microcin immunity protein MccF (mccF)
mukE protein (mukE)
mukF protein (mukF)
pmbA protein (pmbA)
toxin resistance protein
undecaprenol kinase, putative
Pathogenesis
accessory cholera enterotoxin (ace)
accessory colonization factor AcfA (acfA)
accessory colonization factor AcfB (acfB)
accessory colonization factor AcfC (acfC)
agglutination protein
cholera enterotoxin, A subunit (ctxA)
cholera enterotoxin, beta subunit (ctxB)
cholera toxin secretion protein EpsM (epsM)
cholera toxin transcriptional activator (toxR)
colonization factor (cep)
conserved hypothetical protein/hemolysin, putative
conserved hypothetical protein/hemolysin, putative
haemagglutinin
haemagglutinin associated protein
haemolysin (hlyA)
hemagglutinin/protease (hap)
hemolysin (hlx)
hemolysin, putative
hemolysin, putative
hemolysin, putative
hemolysin, putative
hemolysin, putative
leader peptidase PilD (pilD)
leader peptidase TcpJ (tcpJ)
MSHA biogenesis protein MshE (mshE)
MSHA biogenesis protein MshF (mshF)
MSHA biogenesis protein MshG (mshG)
MSHA biogenesis protein MshH (mshH)
MSHA biogenesis protein MshI (mshI)
MSHA biogenesis protein MshJ (mshJ)
MSHA biogenesis protein MshK (mshK)
MSHA biogenesis protein MshL (mshL)
MSHA biogenesis protein MshM (mshM)
MSHA biogenesis protein MshN (mshN)
MSHA pilin protein MshA (mshA)
MSHA pilin protein MshB (mshB)
MSHA pilin protein MshC (mshC)
MSHA pilin protein MshD (mshD)
peptide methionine sulfoxide reductase
RTX toxin activating protein (rtxC)
RTX toxin RtxA (rtxA)
tagD protein (tagD)
VC0843
VCA1043
VC0838
VCA0218
VCA1111
VC0828
VC0831
VC0829
VC0833
VC0836
VC0837
VC0827
VC0825
VC0826
VC0830
VC0832
VC0834
VC0835
VC0820
VC1458
VC0687
VC0139
VCA0823
VC2451
VC2710
VC0304
VC1663
VC1117
VC2691
VC1678
VC1677
VC1676
VCA0100
VCA1104
VC0576
VC0577
VC0531
VC0076
VC0557
VC2296
VC1700
VC1288
VC1287
VC1022
VC0415
VC0416
VC0417
VC0949
VC2145
VCA0392
VCA0475
VCA0391
VCA0359
VC0846
VC1758
VC0847
VCA0281
VC0516
VC1469
VC1475
VC0980
VC1454
VC1463
VC1453
VC1462
VC1452
VC1455
VC1464
VC0870
VCA0493
VCA0202
VCA0275
VC0253
tagE protein (tagE)
tagE protein (tagE)
TCP pilus virulence reg protein (tcpN)
thermolabile hemolysin
thermostable hemolysin (tdh)
toxin co-regulated pilin (tcpA)
toxin co-regulated pilus biosynthesis outer membrane protein C (tcpC)
toxin co-regulated pilus biosynthesis protein B (tcpB)
toxin co-regulated pilus biosynthesis protein D (tcpD)
toxin co-regulated pilus biosynthesis protein E (tcpE)
toxin co-regulated pilus biosynthesis protein F (tcpF)
toxin co-regulated pilus biosynthesis protein H, (tcpH)
toxin co-regulated pilus biosynthesis protein I (tcpI)
toxin co-regulated pilus biosynthesis protein P (tcpP)
toxin co-regulated pilus biosynthesis protein Q (tcpQ)
toxin co-regulated pilus biosynthesis protein R (tcpR)
toxin co-regulated pilus biosynthesis protein S (tcpS)
toxin co-regulated pilus biosynthesis protein T (tcpT)
ToxR-activated gene A protein, (tagA)
zona occludens toxin (zot)
Adaptations to atypical conditions
carbon starvation protein A, putative
DPS family protein
ectoine synthase (ectC)
GTP pyrophosphokinase (relA)
guanosine-3',5'-bis(diP) 3'-pyrophosphohydrolase (spoT)
guanosine-5'-triP,3'-diphosphate pyrophosphatase (gppA)
heat shock protein HslJ (hslJ)
heat shock protein HtpX (htpX)
periplasmic protein cpxP, putative
phage shock protein A
phage shock protein B (pspB)
phage shock protein C (pspC)
phage shock protein E (pspE)
sensor histidine kinase
stringent starvation protein A (sspA)
stringent starvation protein B (sspB)
survival protein SurE (surE)
universal stress protein A (uspA)
Other
autoinducer-2 production protein (luxS)
bolA protein (bolA)
ispA protein (ispA)
periplasmic glucans biosynthesis protein MdoG (mdoG)
periplasmic glucans biosynthesis protein MdoH (mdoH)
phosphorelay protein (luxU)
rod shape-determining protein MreB (mreB)
rod shape-determining protein MreC (mreC)
rod shape-determining protein MreD (mreD)
rod shape-determining protein RodA (rodA)
tyrA protein (tyrA)
Other categories
Plasmid-related functions
antidote protein, putative
doc protein
killer protein, putative
plasmid stabilization element ParE, putative
Phage-related functions and prophages
integrase DRF
integrase, phage family
integrase, phage family
integrase, putative
phage integrase
phage replication protein Cri (cri)
phage replication protein Cri (cri)
rcp protein,
RstA1 protein (rstA1)
RstA2 protein (rstA2)
RstB1 protein (rstB1)
RstB2 protein (rstB2)
RstC protein (rstC)
transcriptional reg RstR (rstR1)
transcriptional repressor RstR (rtsR2)
Transposon-related functions
IS1004 transposase (tnpA)
IS1004 transposase (tnpA)
IS1004 transposase (tnpA)
IS1004 transposase (tnpA)
IS1004 transposase-related protein
VCA0472
VCA0282
VCA0795
VC0254
VC0501
VC0256
VC1477
VC1790
VCA0372
VCA0507
VCA0792
VC0500
VC0257
VC0499
VC1478
VC1789
VCA0371
VCA0508
VCA0791
VC0817
VC0185
VC0818
VC1598
VC0884
VCA0639
VCA0941
VC1584
VC0442
VC1736
VC1039
VCA0975
VC1482
VC0143
VC2160
VC1430
VC1562
VC1547
VCA0463
VCA0328
VCA0341
VC2515
VC0653
VC0658
VC0703
VC1620
VCA0662
VCA0798
VCA0102
VCA1042
VC1935
protein
VC0528
VCA0895
VC1763
VC2339
VC0542
VC2719
VC0032
VC1252
VC0060
VCA0800
VC0123
VC2153
VCA0630
VC0267
VC2627
VCA0573
VCA0534
VC1002
VC0175
VCA0308
VC0510
VC0050
VC1696
VC0090
VCA0324
VC2287
IS5 transposase
IS5 transposase
resolvase, putative
RfbQRSO22-3
transposase
transposase OrfAB, subunit A (orfA)
transposase OrfAB, subunit A (orfA)
transposase OrfAB, subunit A (orfA)
transposase OrfAB, subunit A (orfA)
transposase OrfAB, subunit A (orfA)
transposase OrfAB, subunit A (orfA)
transposase OrfAB, subunit A, (orfA)
transposase OrfAB, subunit B (orfB)
transposase OrfAB, subunit B (orfB)
transposase OrfAB, subunit B (orfB)
transposase OrfAB, subunit B (orfB)
transposase OrfAB, subunit B (orfB)
transposase OrfAB, subunit B (orfB)
transposase OrfAB, subunit B (orfB)
transposase, putative
transposase, putative
transposase, putative
Unknown
General
ABC transporter, periplasmic subunitstrate-binding protein-related protein
acetyltransferase-related protein
AcrA/AcrE family protein
acyl-CoA thioester hydrolase-related protein
ankB protein (ankB)
apaG protein (apaG)
arginyl-tRNA-protein transferase-related protein
AsmA-related protein
ATP-dep protease LA-related protein
ATP-dep protease LA-related protein
ATPase A chain family protein
bacterioferritin comigratory protein (bcp)
bax protein, putative
beta-lactamase-related protein
biopolymer transport protein ExbB-related
biphenyl-2,3-diol 1,2-dioxygenase III-related protein
biphenyl-2,3-diol 1,2-dioxygenase III-related protein
biphenyl-2,3-diol 1,2-dioxygenase III-related protein
BolA/YrbA family protein
c-di-GMP phosphodiesterase A-related protein
c-di-GMP phosphodiesterase A-related protein
c-di-GMP phosphodiesterase A-related protein
cadherin-related protein
CbbY family protein
CbbY family protein
CbbY family protein
Ccm2-related protein
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase-related
CDP-ribitol pyrophosphorylase-related protein
chemotactic transducer-related protein
chemotaxis protein MotB-related protein
chromate resistance protein-related protein
CinA-related protein
ComF-related protein
ComM-related protein
competence damage protein CinA, putative
crcB protein
creA protein (creA)
cyaY protein (cyaY)
D,D-carboxypeptidase-related protein
D-3-phosphoglycerate dehydrogenase-related protein
D-isomer specific 2-hydroxyacid dehydrogenase family protein
DamX-related protein
DamX-related protein
DedA family protein
dedD protein (dedD)
deoxycytidylate deaminase-related protein
deoxyguanosinetriphosphate triphosphohydrolase-related protein
DNA repair protein RadC-related protein
DNA topoisomerase I-related protein
DNA-binding protein inhibitor Id-2-related protein
DNA-damage-inducible protein F (dinF)
DNA-damage-inducible protein J (dinJ)
DNA-damage-inducible protein P (dinP)
VC0447
VCA0788
VC1373
VC1374
VC0788
VC1798
VC2565
VC0615
VC1579
VC1366
VC2621
VC0036
VC1436
VC2361
VCA0178
VC2696
VC0206
VC0759
VC0197
VC0130
VC1934
VC1185
VC1370
VC1372
VC1599
VC2224
VC2454
VC1216
VC1353
VC1593
VCA0557
VCA0049
VCA0074
VCA0956
VCA0960
VCA0965
VCA0217
VC1367
VCA0560
VC0900
VC1029
VC1104
VC1376
VC2750
VC2697
VCA0785
VCA0080
VCA0165
VC2285
VCA0848
VC2688
VC0690
VC2775
VC2774
VC0595
VCA1011
VCA0022
VCA0890
VC1161
VC2185
VC0763
VC2460
VC0348
VC2463
VC0437
VCA0720
VCA0346
VC0456
VC1415
VCA0017
VC1636
VC0812
VC0930
VC1888
VC2311
VC0627
VC0750
VC2075
VC0908
VC2042
DnaJ-related protein
DnaJ-related protein
DnaK-related protein
DnaK-related protein
DOPA-dioxygenase-related protein
eha protein (eha)
elaA protein (elaA)
endoglucanase-related protein
enterobactin synthase component F-related protein
exsB protein
extracellular nuclease-related protein
FixG-related protein
FixS-related protein
formate acetyl transferase-related protein
frnE protein (frnE)
fxsA protein (fsxA)
GckR family protein
gcpE protein (gcpE)
gene 3 protein-related protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
GGDEF family protein
glpX protein (glpX)
glucokinase reg protein-related protein
glucose inhibited division protein A (gidA)
glucose inhibited division protein B (gidB)
glutamyl-tRNA synthase-related protein
glutaredoxin-related protein
glutathione S-transfersae-related protein
glyoxylase I family protein
gonadoliberin III-related protein
GTP-binding protein
GTP-binding protein
GTP-binding protein Era (era)
GTP-binding protein HflX (hflX)
GTP-binding protein LepA (lepA)
GTP1/Obg family protein
guanylate cyclase-related protein
H-REV 107-related protein
HAM1 protein
hcp protein (hcp)
hcp protein (hcp)
helicase-related protein
helicase-related protein
hemolysin-related protein
hemolysin-related protein
HesA/MoeB/ThiF family protein
hesB family protein
hesB family protein
histidine triad family protein
histidinol phosphatase-related protein
histone deacetylase/AcuC/AphA family protein
VC1897
VCA0120
VC0822
VC1031
VCA0878
VC1759
VCA0812
VCA0754
VC1064
VC0481
VC0075
VC2027
VCA0957
VCA1027
VC2450
VCA0485
VC2336
VC1065
VCA0832
VC0113
VC1796
VC2067
VC0002
VCA0175
VC1037
VC0155
VC0680
VC0023
VC0379
VC0291
VC1184
VC0749
VC0335
VCA0808
VC0091
VC1329
VC1753
VC1754
VC0178
VCA0661
VC1089
VCA0549
VC0961
VC1236
VC1998
VCA0969
VC0936
VC1500
VC1106
VCA0045
VCA0659
VC1944
VC0195
VC1879
VCA0504
VCA0349
VCA0444
VC0245
VC0249
VCA0203
VCA0492
VC0258
VC2333
VC0270
VC1532
VC1782
VCA0038
VCA0628
VC0982
VC0923
VC0919
VCA0610
VC0352
VCA0949
VC0851
VC0048
VC0049
VC2346
VC1717
VCA0140
Hit family protein
IcmF-related protein
inner membrane protein, putative
inosine monoP dehydrogenase-related protein
integrase-related protein
integrase-related protein
leucine aminopeptidase-related protein
lipase-related protein
lipoprotein-related protein
LysE/YggA family protein
MadN protein (madN)
Maf/YceF/YhdE family protein
malate synthase-related protein
maltose operon periplasmic protein, putative
mazG protein (mazG)
mazG-related protein
methionyl-tRNA synthase-related protein
methylated-DNA--protein-cysteine methyltransferase-related protein
methyltransferase, putative
methyltransferase-related protein
middle operon regulator-related protein
MinD-related protein
mioC protein (mioC)
MoxR-related protein
mrp protein (mrp)
MutL-related protein
MviN protein (mviN)
NADH dehydrogenase subunit II-related protein
NifR3/Smm1 family protein
NifR3/Smm1 family protein
NifS-related protein
NifU-related protein
NlpD-related protein
NodN-related protein
O-methyltransferase-related protein
opacity protein-related protein
paraquat-inducible protein A (pqiA)
paraquat-inducible protein B (pqiB)
patatin-related protein
peptidyl-prolyl cis-trans isomerase-related protein
periplasmic binding protein-related protein
phnA protein (phnA)
phoH family protein
PilB-related protein
PilB-related protein
pirin-related protein
polysaccharide export-related protein
PqiA family protein
preprotein translocase SecA subunit-related protein
protease-related protein
protein F-related protein
PvcB protein (pvcB)
rarD protein (rarD)
Rec2-related protein
relB protein (relB)
relB protein (relB)
relE protein (relE)
rfbG protein (rfbG)
rfbL protein (rfbL)
rfbP protein, (rfbP)
RfbP-related protein
rfbT protein (rfbT)
ribosomal protein S6 modification protein-related protein
ROK family protein
ROK family protein
ROK family protein
Sco1-related protein
SecA-related protein
selenoprotein W-related protein
serine acetyltransferase-related protein
serine acetyltransferase-related protein
sigma cross-reacting protein 27A
slyX protein (slyX)
SM-20-related protein
small protein A (smpA)
smf protein (smf)
smg protein (smg)
smp protein, putative
smtA protein (smtA)
spindolin-related protein
VC0039
SpoOM-related protein
VC0054
Sua5/YciO/YrdC family protein
VCA0570 Sui1 family protein
VC1356
sulfite reductase, gamma subunit-related protein
VC0044
sun protein (sun)
VC1502
Sun/nucleolar protein family protein
VC0903
syd protein (syd)
VCA0148 TagA-related protein
VC0813
tellurite resistance protein-related protein
VC1470
tlcR protein, (tlcR)
VC1476
tlcR protein, (tlcR)
VC0422
tldD protein (tldD)
VCA0625 TonB receptor-related protein
VC1720
torD protein (torD)
VC1416
vgrG protein (vgrG)
VCA0018 vgrG protein (vgrG)
VCA0123 vgrG protein (vgrG)
VC2474
visC protein (visC)
VC0963
VisC-related protein
VC0864
yfhC protein (yfhC)
Conserved Hypothetical Protein
VC0005
VC0022
VC0024
VC0033
VC0035
VC0037
VC0041
VC0047
VC0057
VC0073
VC0079
VC0080
VC0081
VC0082
VC0084
VC0087
VC0088
VC0103
VC0106
VC0111
VC0114
VC0115
VC0127
VC0129
VC0131
VC0134
VC0136
VC0137
VC0140
VC0144
VC0145
VC0146
VC0153
VC0163
VC0165
VC0180
VC0181
VC0187
VC0191
VC0204
VC0208
VC0209
VC0227
VC0234
VC0237
VC0239
VC0254
VC0264
VC0265
VC0266
VC0268
VC0271
VC0300
VC0302
VC0309
VC0337
VC0340
VC0343
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
VC0351
VC0353
VC0355
VC0356
VC0357
VC0358
VC0370
VC0373
VC0376
VC0377
VC0420
VC0421
VC0424
VC0428
VC0429
VC0438
VC0439
VC0451
VC0453
VC0458
VC0459
VC0461
VC0466
VC0467
VC0469
VC0480
VC0483
VC0490
VC0494
VC0495
VC0503
VC0515
VC0519
VC0523
VC0527
VC0529
VC0530
VC0553
VC0559
VC0567
VC0568
VC0580
VC0582
VC0603
VC0605
VC0614
VC0623
VC0624
VC0628
VC0630
VC0635
VC0641
VC0648
VC0650
VC0651
VC0654
VC0661
VC0673
VC0688
VC0689
VC0691
VC0694
VC0702
VC0708
VC0710
VC0718
VC0728
VC0742
VC0747
VC0754
VC0757
VC0758
VC0761
VC0762
VC0765
VC0770
VC0783
VC0806
VC0842
VC0845
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
VC0849
VC0850
VC0853
VC0863
VC0872
VC0873
VC0876
VC0880
VC0881
VC0882
VC0887
VC0897
VC0899
VC0902
VC0904
VC0913
VC0931
VC0940
VC0945
VC0951
VC0952
VC0957
VC0960
VC0962
VC0975
VC0976
VC0977
VC0981
VC1005
VC1009
VC1023
VC1048
VC1052
VC1055
VC1058
VC1067
VC1075
VC1079
VC1096
VC1099
VC1101
VC1105
VC1108
VC1120
VC1121
VC1124
VC1127
VC1131
VC1143
VC1145
VC1148
VC1151
VC1153
VC1163
VC1164
VC1165
VC1177
VC1178
VC1194
VC1198
VC1199
VC1208
VC1211
VC1217
VC1229
VC1232
VC1233
VC1249
VC1250
VC1259
VC1261
VC1268
VC1269
VC1274
VC1275
VC1285
VC1291
VC1295
VC1306
VC1307
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
VC1311
VC1317
VC1322
VC1332
VC1334
VC1339
VC1346
VC1354
VC1358
VC1364
VC1365
VC1369
VC1377
VC1421
VC1432
VC1433
VC1435
VC1468
VC1474
VC1481
VC1487
VC1488
VC1490
VC1492
VC1497
VC1498
VC1501
VC1503
VC1508
VC1523
VC1533
VC1534
VC1539
VC1555
VC1556
VC1563
VC1566
VC1567
VC1576
VC1582
VC1587
VC1592
VC1606
VC1607
VC1608
VC1609
VC1614
VC1615
VC1624
VC1628
VC1629
VC1631
VC1632
VC1641
VC1645
VC1647
VC1656
VC1659
VC1662
VC1667
VC1685
VC1687
VC1697
VC1698
VC1701
VC1702
VC1703
VC1708
VC1710
VC1711
VC1712
VC1718
VC1722
VC1723
VC1731
VC1744
VC1751
VC1755
VC1766
VC1767
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
VC1768
VC1773
VC1774
VC1775
VC1777
VC1778
VC1781
VC1791
VC1792
VC1807
VC1811
VC1812
VC1828
VC1834
VC1840
VC1841
VC1842
VC1850
VC1851
VC1852
VC1853
VC1856
VC1858
VC1867
VC1871
VC1872
VC1873
VC1874
VC1876
VC1880
VC1882
VC1884
VC1892
VC1893
VC1894
VC1895
VC1912
VC1913
VC1917
VC1931
VC1937
VC1938
VC1939
VC1940
VC1957
VC1963
VC1966
VC1974
VC1978
VC1980
VC1986
VC1989
VC1996
VC2001
VC2004
VC2009
VC2014
VC2017
VC2026
VC2035
VC2039
VC2040
VC2041
VC2044
VC2060
VC2073
VC2093
VC2100
VC2101
VC2110
VC2111
VC2112
VC2113
VC2115
VC2119
VC2146
VC2150
VC2163
VC2164
VC2172
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
VC2176
VC2177
VC2206
VC2216
VC2220
VC2222
VC2229
VC2235
VC2238
VC2253
VC2264
VC2272
VC2276
VC2278
VC2282
VC2286
VC2288
VC2297
VC2303
VC2310
VC2323
VC2326
VC2330
VC2334
VC2340
VC2353
VC2355
VC2371
VC2378
VC2381
VC2382
VC2384
VC2386
VC2387
VC2409
VC2427
VC2428
VC2429
VC2432
VC2434
VC2440
VC2441
VC2443
VC2471
VC2472
VC2473
VC2476
VC2478
VC2479
VC2487
VC2488
VC2497
VC2498
VC2499
VC2500
VC2507
VC2512
VC2517
VC2518
VC2519
VC2522
VC2523
VC2524
VC2526
VC2527
VC2532
VC2536
VC2546
VC2547
VC2548
VC2550
VC2551
VC2554
VC2566
VC2567
VC2600
VC2610
VC2612
VC2615
VC2620
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
VC2647
VC2652
VC2654
VC2661
VC2662
VC2666
VC2668
VC2671
VC2686
VC2690
VC2703
VC2706
VC2716
VC2720
VC2735
VC2736
VC2739
VC2740
VC2741
VC2757
VCA0382
VCA0385
VCA0395
VCA0401
VCA0415
VCA0422
VCA0423
VCA0445
VCA0455
VCA0469
VCA0476
VCA0477
VCA0481
VCA0482
VCA0487
VCA0488
VCA0489
VCA0503
VCA0506
VCA0524
VCA0526
VCA0527
VCA0528
VCA0536
VCA0539
VCA0543
VCA0544
VCA0546
VCA0569
VCA0574
VCA0578
VCA0580
VCA0581
VCA0582
VCA0586
VCA0587
VCA0608
VCA0629
VCA0634
VCA0636
VCA0640
VCA0641
VCA0651
VCA0681
VCA0689
VCA0703
VCA0716
VCA0718
VCA0732
VCA0739
VCA0740
VCA0741
VCA0743
VCA0753
VCA0762
VCA0763
VCA0769
VCA0776
VCA0777
VCA0778
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
VCA0781
VCA0786
VCA0789
VCA0802
VCA0809
VCA0835
VCA0838
VCA0846
VCA0847
VCA0851
VCA0854
VCA0887
VCA0891
VCA0894
VCA0903
VCA0905
VCA0907
VCA0908
VCA0919
VCA0924
VCA0927
VCA0930
VCA0931
VCA0938
VCA0948
VCA0951
VCA0970
VCA0972
VCA0986
VCA0989
VCA1000
VCA1004
VCA1010
VCA1012
VCA1013
VCA1019
VCA1021
VCA1026
VCA1051
VCA1052
VCA1053
VCA1054
VCA1059
VCA1065
VCA1072
VCA1077
VCA1083
VCA1085
VCA1097
VCA1102
VCA1112
VCA0006
VCA0010
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
VCA0024
VCA0026
VCA0034
VCA0037
VCA0040
VCA0043
VCA0047
VCA0048
VCA0055
VCA0058
VCA0076
VCA0079
VCA0090
VCA0091
VCA0094
VCA0097
VCA0101
VCA0105
VCA0107
VCA0108
VCA0146
VCA0152
VCA0153
VCA0154
VCA0156
VCA0159
VCA0163
VCA0164
VCA0167
VCA0171
VCA0172
VCA0174
VCA0185
VCA0191
VCA0208
VCA0213
VCA0225
VCA0243
VCA0248
VCA0309
VCA0318
VCA0319
VCA0323
VCA0338
VCA0345
VCA0347
VCA0348
VCA0355
VCA0426
VCA0478
VCA0643
VCA0332
1.
Riley, M. Functions of the gene products of Escherichia coli. Microbiol Rev 57, 862-952 (1993).
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein
conserved hypothetical protein