Work Package Number: 2.1 Running Title: Control of Viral Diseases in Livestock Policy Context The Aim of the Animal Health and Welfare Strategy for Great Britain (AHWS) is: ‘To improve the health and welfare of animals kept by man, and protect public health from disease’. The development of animal health and welfare policy and its implementation under the AHWS will be underpinned by high quality science. A vigorous science base and the outputs of high quality research should be capable of contributing to industry best practice and thus improving performance of the Scottish livestock sector. The contribution of this work package on endemic viral diseases is expected to be new knowledge that will lead to improved vaccines, diagnostics and farm management control methods. Where possible the work will lead to the development and application of the resulting new and improved control methods for viral diseases of sheep and cattle. In line with the principles of the AHWS the work should lead to disease prevention taken forward in partnership between livestock owners, veterinarians, and Government. Improvements in virus disease control are expected to contribute to improved animal welfare, improved nutrient utilisation i.e. reduced N and P pollution and improved carcase quality. These in turn will assist in protection of the interests of the wider economy and society and securing opportunities for trade. Required Outputs Improved diagnosis and control of important endemic viral diseases of livestock in Scotland. Underpinning knowledge that will enable breeding for disease resistance and vaccine development: innate and specific immune responses to viral pathogens. pathogenesis of viral infections. Application of functional genomics to study of host-pathogen interactions. Epidemiological studies: understanding patterns of disease through pathogen biology. linked to the effects of control measures via surveillance data. economics of diseases control. Molecular epidemiology of viral pathogens. Impacts of Research The overall aim is to develop and implement sustainable control measures for endemic viral diseases of livestock in Scottish livestock systems post CAP reform. The research should take account of trends for example to extensification and low-input systems in some areas and increasing use of beef suckler herds in other areas. The expertise deployed in this work package should maintain flexibility and capability to adapt to different priorities that might emerge from the AHWS Steering Group. 1 Linkages Anticipated Key disciplines/areas of work in this package are: Genetics/genomics of host and pathogen, immunology, pathology, impact of farm management, use of surveillance data for epidemiological studies. Linkages to common elements in WPs 2.2, 2.3, 2.5 should be included. Appropriate links to WPs 2.5 and 3.1 could be included to optimise delivery of outputs should be made to optimise delivery of outputs. Collaboration with BBSRC Institutes to bring added value, for example to studies on immunity and pathogenesis, and on genetics of disease resistance. The activities in this work package should play a part in connecting and integrating surveillance data, epidemiology and modelling studies with laboratory studies. Exchange of information and personnel between organisations, for example research and surveillance, or research and industry could contribute to the WP. Outputs from this work package will complement the other work packages carried out to deliver Programme Objectives 5, 6 and 7 and contribute to Environmental, social and economic sustainability of Rural Scotland (CCT3). Application of genomic technologies could be enhanced by linkage to the Scottish Bioinformatics Research Network. Suggested Movement From Current Position Demonstration of end-user linkages and participation to ensure relevance of the research programme. Demonstration of effective linkage between surveillance and research on viral diseases. Further consideration of how the research might contribute to national or voluntary eradication schemes. 2 FORM WPD P1-3 Nov05: WORK PACKAGE DETAILS Section 1: Contacts and Organisations: 1.1 Title of SEERAD Programme Profitable and Sustainable Agriculture - Animals 1.2 Title of work package Control of viral diseases of livestock 1.3 Work package reference number 2.1 1.4 Work package manager details: Title Forename Surname Organisation Name Department or Division Address Line 1 Address Line 2 Address Line 3 Town/City Country Email Telephone FAX Dr David Haig Moredun Research Institute Virology Pentlands Science Park Bush Loan Penicuik Scotland david.haig@moredun.ac.uk +44 (0)131 445 5111 +44 (0)131 445 6111 3 1.5 Organisations involved in work package and percentage contribution. Organisation Name Moredun Research Institute Scottish Agricultural Colleges BIOSS % Total WP cost 80 15 Costs in WP 2.2 1.6 Total work package cost (£ GBP). £8,728,123 1.7 Duration of work package 5 years 1.8 Start date (dd/mm/yy) 01/04/06 1.9 End date (dd/mm/yy) 31/03/11 4 Section 2: Strategic Relevance. Please note: Section 2 is designed to allow assessment of the strategic policy and end-user relevance of the proposed work package by non-scientists. The information provided in this section should be written in a style that someone with a standard level education in science would find informative and accessible. 2.1 Overview. Summarise in approximately 500 words the proposed work and indicate how it will address the required outputs, including the relevance of the proposed work to SEERAD policy, end user(s), relevant sector(s) and to Scotland. The work package will consist of four core research projects, called hereafter Projects 14 (#1-3 for MRI, #4 for SAC). The overall goal is to maintain and extend expertise in the biology of endemic viral diseases of livestock (and wildlife) in Scotland to fit fully with the objectives of work programmes 2 and 4. This will be achieved by concentrating research efforts on improved diagnosis and control of targeted poxvirus, herpesvirus and retrovirus diseases of livestock where MRI can build on its internationally-recognised quality of science in these areas; maintain surveillance (MRI / SAC) to monitor endemic virus disease in Scotland; to form strategic collaborations with other groups and deliver a quality outcome in line with SEERAD and AHP strategy. We will underpin knowledge enabling vaccine development and breeding for disease resistance. The pathogenesis studies will involve an understanding of innate and adaptive immune responses to the targeted viruses and the deployment of functional genomic and proteomic technologies to study host-virus interactions. The programme has an epidemiology component, is well integrated with virus surveillance and involves a component on the economics of disease control (MRI / SAC). This package is of relevance to SEERAD policy and targets a broad range of end users /stakeholders, from the scientific community to farmers, veterinarians and policy makers. BIOSS input will be from other work packages. The Projects are as follows: 1. PATHOGENESIS AND CONTROL OF POXVIRUS INFECTION. The most important of the poxvirus diseases of livestock endemic to Scotland is orf in sheep. Orf is an acute debilitating skin disease of lambs and is a zoonosis, causing pustular lesions in human skin. We wish to determine the pathogenesis of orf virus infection in sheep; develop improved diagnostic tests for parapoxvirus disease and devise new control strategies. We will also study a pox virus that is killing red squirrels in the UK. 2. PATHOGENESIS AND CONTROL OF HERPESVIRUS INFECTION. The herpesvirus diseases endemic in Scotland and of concern to stakeholders include infectious bovine rhinotracheitis (IBR) of cattle caused by the alphaherpesvirus BoHV-1 and malignant catarrhal fever (MCF) of cattle and deer caused by the gammaherpesvirus OvHV-2. The main aims of this project are: to determine the molecular and cellular mechanism of the pathogenesis of herpesvirus disease; develop new or improved control strategies; and develop specific diagnostic tests. 5 3: PATHOGENESIS AND CONTROL OF RETROVIRUS INFECTION. An important retroviral disease in Scotland is ovine pulmonary adenocarcinoma (OPA), involving lung tumours in adult sheep. The main aims are: to understand the pathogenesis and epidemiology of OPA; develop immunisation procedures to protect sheep from OPA; and develop diagnostic tests. 4: EPIDEMIOLOGY AND COST BENEFIT OF VIRUS DISEASE CONTROL This SAC project will focus on consolidating and validating livestock disease decision support methods. Specifically we will produce enhanced and validated tools to aid decision-making relating to the control of the most important endemic viral diseases in Scotland. These will be IBR and OPA as well as Maedi-Visna and bovine viral diarrhoea (BVD). The end users targeted will be livestock farmers, animal health professionals, policy makers and auxiliary industries. In each case, the important viral diseases are the subject of related research elsewhere in this work package. All elements of the diagnosis, epidemiology, control with farm and regional level economic appraisal will be pooled together within this project. 2.2 Outcomes. Describe the specific outcomes intended to arise from the proposed work and explain how these will meet the “Required Outputs” given in the work package specification. Outcomes could include products and technologies, advice, recommendations, guidelines, protocols, IP and products, software and technology as well as scientific knowledge. 1. New information leading to the understanding of the pathogenesis of poxvirus infections, herpesvirus infections and retrovirus infections. In particular orf virus in sheep, squirrelpox, OPA in sheep, MCF in cattle and deer and IBR in cattle, as well as some autoimmune diseases of animals and man (by way of the autoimmune pathogenesis of MCF). This will involve the use of functional genomic and proteomic techniques amongst others and will also involve an understanding of host innate and adaptive immune responses. Improved advice to stakeholders on disease prevalence, transmission and control will be facilitated through Project 4, particularly for OPA, Mucosal disease of cattle, IBR of cattle and Maedi Visna disease of sheep. This meets several of the required outcomes for the workpackage (pathogenesis, functional genomics, pathogen biology, host response, epidemiology). 2. Development of a differential diagnosis of ovine herpesvirus-2 (OvHV-2 that causes malignant catarrhal fever (MCF), bovine viral diarrhoea virus (BVDV that causes mucosal disease) and Foot and mouth disease virus (FMDV) in cattle. 3. Development of improved diagnostics for Jaagsiekte sheep retrovirus (JSRV that causes ovine pulmonary adenocarcinoma (OPA). 4. Development of a differential diagnosis of Orf virus, Bovine papular stomatitis virus (BPS), Pseudocowpox virus and Foot and mouth disease virus (FMDV). 2-4 meet the required outcome for improved diagnosis of virus disease. 5. New information leading to the eventual control, or improved control of orf, squirrelpox, OPA, MCF and IBR. New products will be: improved or new vaccines for 6 these diseases; immunological and virological tools and technologies developed as part of the work package. The work may also inform animal (sheep and cattle) breeders of suitable breeds and breeding strategies to produce animals with enhanced disease resistance. This meets the required outcome ‘underpinning knowledge that will enable breeding for disease resistance and (in particular) vaccine development’. 6. New information on the extent of virus disease in livestock in Scotland (MRI / SAC, surveillance and epidemiology groups in collaboration with DEFRA and others). This meets the required output on surveillance and molecular epidemiology. 7. Innovative methods to collate and combine existing and new decision support data for viral disease control; cost benefit studies; enhanced methods of presentation; improved simulation models; fresh animal disease databases, improved analytical frameworks. All these to be appropriate for decision support to farmers and other stakeholders in connection with viral disease prevention and control activities and other actions at farm level where animal health and welfare may be affected. This meets the required output on the economics of disease control. 8. Advice and recommendations to SEERAD, ministers and stakeholders about virus disease in livestock and wildlife in Scotland. 2.3 Benefits. Describe and if possible quantify the benefits which may arise from this research through the application of the intended outcomes described in section 2.2. How will the results/outcomes be used and who will benefit? The likely policy, socio-economic and environmental impacts arising from this work should be identified. Major benefits of the work will be: 1. Effective diagnosis and control of important virus diseases of livestock (and wildlife) in Scotland. Where the diseases are prevalent /important elsewhere in the world, there will be benefits for all stakeholders in the sheep and cattle industry in Scotland, the UK and beyond. The scientific community will benefit from novel and important information on the pathogenesis, diagnosis, epidemiology, economics and control of the virus diseases targeted in the package. Results generated will be used to inform this community as well as SEERAD, ministers, veterinarians and farmers and other interested parties / stakeholders (e.g. pharmaceutical industry). 2. Farmers, veterinary surgeons, associated auxiliary industries and policy makers all stand to benefit from this research to improve methods. At first innovative farmers who quickly adopt the decision support will gain a comparative advantage over their peers. However, as animal health improves, food supply increases and food prices consequently fall, the main beneficiary will be the consumer and society as a whole through the considerable positive externalities that flow from healthy farm livestock. 3. Now that Scottish farmers are competing in a more liberal global food market the main concern must be the threats from not adopting disease prevention strategies. Many countries are ahead in controlling or eliminating serious diseases that are endemic in Scotland. They will gain competitive advantage from this and may even attempt to use 7 their superior health status as a means to restrict trade or reduce consumer demand for food/livestock etc. from countries of lower health status. Given the importance of nonfarming rural business in Scotland and its dependence on healthy farm livestock and the image this creates, it is this sector that has most to gain from this research proposal. 4. Improved diagnosis and control of the targeted virus diseases of livestock and wildlife will inform policy in the area of sustainable agriculture (animals) through disease control / management. 2.4 Knowledge and technology transfer. Describe plans for knowledge and technology transfer. Provide details of mechanisms, routes and timings of and audiences for knowledge and technology transfer activities. Include brief details of dialogue with end user(s) who have helped plan/focus the work. Introduction The overall objective of the Work Package is to develop and implement sustainable control measures for endemic viral diseases of livestock. Knowledge and technology transfer are essential components of the research that is intended to change perceptions, attitudes and behaviour. As outlined in the “Programme for Knowledge Management and Transfer to deliver SEERAD’s Strategy for Biological Research”, our aims are to: To improve knowledge and technology transfer from, and public awareness of the research. To provide to SEERAD knowledge that will enable the ongoing development of policy. To improve knowledge and technology transfer both within and between the MRPs. To create additional opportunities for partnership working between the MRPs to secure innovative developments in knowledge transfer. To improve the engagement with our stakeholders and the public ensuring research, KT and outreach programme are effectively targeted for the future. This programme identifies three major areas of work: Collaborations/Partnerships; Interinstitutional Knowledge Management; and Knowledge Transfer that are integrated with each Research Objective. Collaborations/Partnerships: WP contributors in all participating institutes are already well-placed with collaborations and partnerships both within the SABRI-SAC-BioSS network and externally with universities (e.g. Universities of Edinburgh, Glasgow, Liverpool) and industry (including Pfizer, Intervet and Novartis). These and additional inter-institutional collaborations and partnerships will be further developed to create a network providing critical mass of science as well as creating synergies and novel approached to research. This, together with staff exchanges between institutes, will deliver considerable added value by linkage to other research funding. Collaborative working will also lead to increased efficiencies in research and KT outputs and will therefore raise the profile of MRPs and SEERAD research programme. These linkages also provide the potential to hold regular workshops and project meetings and potentially international research meetings in key interdisciplinary areas. 8 Examples of potential partnership approaches joint research programmes and projects research networks LINK programmes and Faraday partnerships post graduate projects and placements consultancy projects The SABRI-SAC-BioSS network and other MRPs have great potential for new collaborations, including partnerships, looking at plant viruses and animal vaccines (SCRI/MRI), Bovine Viral Diarrhoea (RVC/ SAC/ MRI) and several contract research projects with the animal health industry through MSL and SAC Commercial. Inter-institutional Knowledge Management: Knowledge management is a prerequisite to knowledge transfer. As a result of existing collaborations and KT activities, a strong network of communication channels exists between the MRPs in this WP. Through the course of the Programme, these will be further developed to facilitate data and information relevant to this Work Package is received, shared and effectively managed between institutes and with customers and various stakeholder groups. A network of co-ordinated cross institutional consultative committees will be established where required. Examples of how MRPs will communicate effectively in this work package key staff will take part in regular meetings staff will be identified as having management responsibility staff involved in knowledge management will receive training in project management, negotiation and facilitation establishment of pan institutional web sites sharing of database management systems video conferencing Knowledge Transfer: Institutes contributing to this WP have well-established mechanisms for knowledge transfer towards policy makers, end-users (e.g. farmers and veterinarians), the scientific community, the general public and the commercial industry. This WP will continue to engage in KT activities that will pass information about the latest research advances to the people who will benefit from it. For instance, by producing regular technical newssheets, attending agricultural events and conferences, providing articles to numerous farming journals, involvement in questionnaire surveys, veterinary and public press and by holding farmer and veterinary events throughout the UK. Web sites are an increasingly valuable source of information the use of which will be developed further. Steps will also be taken to engage with policy makers to contribute to decision-making and guide future developments. In our approach to knowledge transfer we propose to develop a range of activities. Examples of matched KT activities for each audience are given in table A. 9 Table A – Examples of \matched KT activities with specific audiences audience aim Example of KT activities Policy makers increase the flow of communication between policy makers and implementers and scientists hold an annual research policy conference produce policy based fact sheets for scientists produce science highlights for policy makers/implementers hold regular briefing meetings between policy makers and scientists establish 'hot links' between policy makers website and MRPs website on key information hold science days at MRI specifically for policy makers and implementers supply general science stories to non scientific/farming/veterinary press public Increase public understanding of science and the profile of science within schools develop exhibitions targeted for the general public at high profile science/agricultural events (eg. science festival, techfest, royal highland show) host school visits at MRI Arrange a programme of talks to school children in schools by MRP scientists work with schools and educational authorities to develop curriculum relevant science resources for schools develop a programme of secondment/work placements for science teachers to MRI offer CPD events for science teachers establish work experience placements for students to MRI develop existing web site to increase the content of public focused scientific information available supply general science stories to non scientific/farming/veterinary press Develop a communication and knowledge transfer centre establish a network of Partner Participative Centres with the other MRPs Scientific community Increase communication and collaboration between all involved in research publication of peer reviewed articles in high quality scientific journals arrange secondments / work exchanges between institutes MRP scientists will present their work at scientific conferences and events develop the existing web site to increase the content of scientific information available encourage MRP scientists to sit on relevant consultative committees 10 commercial business to increase commercialisation of MRPs science hold staff workshops/training to increase staff awareness to IP issues establish a programme IP committee to manage the IP generated by the work programme establish a marketing campaign to increase awareness of the MRP's science and commercial opportunities available. encourage the establishment of spin out companies and commercial subsidiaries Farmers/land based industries To transfer the knowledge from the SEERAD programmes of research produce regular animal health articles that appear in the farming and veterinary press hold an annual press event for farming and veterinary journalists offer CPD training for vets produce technical fact sheets and magazines for those working in the land based industries attend high profile farming and agricultural events to engage with this end user group hold open days for those working in the land based industries hold regional animal health meetings and training events throughout the UK for farmers and vets develop the existing website to include for farmer focused practical animal health information attend and present at land based industry conferences Encourage scientists to sit on consultative committees Moredun has a strong regional advisory committee that currently consists of 36 regional advisors representing 5 UK regions. These regional advisors are all farmers and/or work in the land based industries and the five regional chairmen report to the main Moredun board, which meets quarterly. We consult these advisors regularly to ensure that our KT activities remain effective, focused and relevant. MRI and SAC also consult and regularly works in partnership with stakeholder groups and industry bodies (QMS, NFU Scotland, the Crofters Foundation, Food Standards Agency, National Sheep Association, Institute of Meat Wholesalers, Institute of Auctioneers, various breed societies, the BVA, Sheep Veterinary Society etc) to maximise the effectiveness of our KT activities. 11 Since the main objective of Project 4 (SAC) is decision support, delivery of and developing delivery mechanisms constitutes a major component of this research. To a degree this mechanism will operate to enhance the delivery of results from all the four projects within WP 2.1. Members of the team are actively involved in consultation with the agricultural industry at several levels. This results in direct knowledge transfer but also information flow in the opposite direction informs the research team of the industries' needs and adjusts our research direction. We envisage some collaborative research with farmers, veterinary practitioners and associated support industries. This provides useful KT and a direct stake in the research for potential beneficiaries. In return the project will gain invaluable insights into risk attitudes, resources and constraints etc. that govern the uptake of decision support in Scotland in this context. Farm case studies may also be carried out to test and demonstrate the decision support systems developed. In addition a website, technical notes and farmers meetings will be used to publicise the work. Presentations will be made to the veterinary/scientific community and results published in scientific journals. One of the major knowledge transfer channels will be the transfer of validated methods developed within WP 2.1 for application within the cross-cutting project on cost benefits of diseases. 12 2.5 Contribution to cross-cutting themes. Describe how the proposed work will contribute to the three cross-cutting themes set out in the SEERAD SRG Research Strategy: Responding to Climate Change; Protecting Biodiversity and Environmental; and Social and Economic Sustainability of Rural Scotland. Disease control leads to improved profits and thus social and economic sustainability, and rural development. It leads to fewer animals required for the same output that will be of higher quality. This is better for processors and meets retailers’ requirements and public demands (work packages 2.5, 3.1). The work package contains epidemiological components (MRI and SAC) and links to active and passive surveillance that will allow us to monitor any changes in endemic virus diseases in Scotland (Responding to Climate Change). Close co-operation with DEFRA and the EU (surveillance) and IAH (virus research) groups will facilitate this. Examples of (currently exotic) virus diseases that may affect Scotland with warmer weather are “Bluetongue” in sheep and “West Nile virus” in a variety of animal species. The package allows for interaction with other groups to monitor and control this eventuality, for example through co-funded programmes. Protecting Biodiversity: A change in Scottish farming practice to high quality, specialist products is currently under way. In addition, the distribution and occurrence of wildlife disease carriers may change. There is a possibility that these changes will affect the incidence of disease in these and other animals. The work package contains elements that target this theme: in particular our work on a poxvirus that kills red squirrels and leaves greys unaffected; an awareness that malignant catarrhal fever (MCF) may increase; and surveillance on louping ill, a viral disease transmitted to sheep and red grouse by ticks. Links with other groups (see above) will inform us of any changes in virus disease that would affect biodiversity and initiate collaborative co-funded control strategies. Environmental, Social and Economic sustainability of Rural Scotland: The foot and mouth crisis of 2001 clearly demonstrated that farm animal disease can threaten the rural economy. In Scotland this issue is particularly important as many rural businesses depend upon the 'Scottish Brand', built on the world-renowned Scottish countryside, maintained by a healthy livestock industry. The 'Scottish Brand' has been central to the marketing of Scotch Beef and Scotch Lamb. Consumer recognition of these brands, which enjoy 'Protected Geographical Status', has reached record levels through QMS led promotional activity. This research aims not only to protect this hard won image but to maintain and enhance it against increasing global competition. Many other countries have higher status than Scotland for endemic diseases. There is therefore no room for complacency. Changes in farming practice as outlined above will impinge on this theme. For example, sustainable farming systems involving an increase in deer farming could increase the incidence of MCF as it will be difficult to separate sheep (carriers of the virus) from this susceptible species. Furthermore as animal and wildlife parks for public access and enjoyment increase, there may be an opportunity for orf, OPA and MCF to increase amongst susceptible animals. We will monitor any virus diseases emerging or increasing in incidence as a result of these changes and form collaborative links to deal with these 2.6 Contribution of work package to Programme. Describe how this work package contributes and adds value to the overall Programme of which the work package is a part. If applicable, briefly state how the proposed work adds value to other SEERAD programmes. An integrated work package on control of virus diseases in livestock is proposed that will generate international quality science, help Scottish livestock enterprises deliver high quality animal food products with concomitant benefits for animal and human health. The package will involve strategic links within MRI, SAC, other SABRIs and with surveillance groups, research groups at other Institutes / Universities, and stakeholders across Scotland, the UK and worldwide. The work package will improve animal health and welfare in an environmentally benign way. The proposals described here will support sustainability of livestock keeping and in this way, the package will contribute significantly to Programme 2: ‘Profitable and sustainable agriculture: animals’. To achieve these ends, the package will focus the core research commitment to understanding specific poxvirus, herpesvirus and retrovirus pathogeneses that will inform us on how to develop novel and needed diagnostic tools and disease control strategies (including vaccination or breeding). In addition the SAC Epidemiology Research Unit will focus on their core research commitment to provide cost benefits of viral disease control in particular pestivirus, sheep retroviruses and bovine herpesviruses. The MRI virus surveillance unit along with SAC targets important viruses within these groups as well as others endemic in Scotland, and will integrate fully with the research priorities. In addition, the virus surveillance unit, through SAC and VLA, performs surveillance on many viruses of veterinary importance to determine changes in prevalence in Scotland. Coverage of other important endemic viral diseases of livestock will also be through formal contact and alliances with expert research and surveillance groupings both within the UK and worldwide. This will facilitate awareness of the important endemic virus diseases of livestock that affect Scotland currently or that may do so in the future, while at the same time focussing research effort into particular virus diseases where we have internationally-acknowledged expertise and believe significant impact will result. This package is designed to meet criteria as embodied in SEERAD’s strategy for agricultural, biological and related research 2005-10, in particular programme 2. The work will concentrate on endemic virus diseases where the MRI with SAC has strength through internationally-acknowledged quality of science, to ensure complementarity and added value for SEERAD. This will generate new knowledge leading to improved vaccines, diagnostics and farm management and disease control methods. We will take account of changes in farming practice including reduced incomes, diversification of farming enterprises, and the effect of the mid-term review of CAP including single farm payments and land management contracts in Scotland. It is anticipated that these changes may affect livestock husbandry practices and farm business economics in such a way that there will be impact on biodiversity and the incidence and prevalence of viral diseases. It is essential that Scotland retains a state-ofthe-art facility in virology to address current and future disease challenges. Outputs will include an understanding of specific virus pathogeneses, diagnostics, epidemiology and animal health economics leading to improved diagnosis and control of disease (see below). The package will also contribute to programme objectives 2.4 (animal welfare); 2.5 (livestock genetics); and objective 4 (impacts on human health). These connections will be expanded below. The package is constructed to support the aim of the AHP for Great Britain, with a Scottish perspective that will inform SEERAD, Scottish Executive ministers and the principal scientific, veterinary and farming stakeholders of the extent of endemic virus disease in livestock in Scotland, any future trends that emerge, and the acquisition of improved diagnostic and control strategies for targeted virus diseases. This will be supported by an economic rationale for the uptake of specific control strategies set at farm and regional level. Stakeholders will be intimately involved in the process. These include not just SEERAD, other funders, farmers and veterinarians, but the wider scientific community and other customers that are essential to the continued success of the workpackage partners. In particular, we wish to perform high quality science on the mechanism of (targeted) virus pathogeneses leading to improved disease diagnosis and control, fulfilling policy criteria as outlined in SEERAD's ‘strategy for agricultural, biological and related research 2005-10’ For all of our targeted virus diseases in Scottish livestock, there are no accurate figures for prevalence. However, Orf and OPA are two important viral diseases of sheep that are currently a problem across Scotland. Work on these viruses will lead to improved understanding of the incidence and prevalence of the diseases through links with surveillance centres and epidemiologists. Studies on disease pathogenesis will lead to improved diagnosis and control that is required by commercial farmers (and identified in Moredun’s recent questionnaire-based study). Orf is also a zoonosis and OPA pathology in the lung has similarities to a disease of the human lung thus giving these projects comparative medical interest. BVD is probably the most important endemic cattle disease in Scotland. Even the visible losses are significant enough to generate great current interest within the farming industry. However, to date, uptake of control strategies has been poor because of lack of understanding and this work package will include research to provide decision-making tools relating to the control of this pestivirus. MCF is currently increasing in prevalence in the UK according to MRI surveillance figures, and accounts for a significant number of confirmed diagnosable cases going through the VLA (see support letter). In addition it is a disease with very high mortality and which causes severe clinical signs associated with the inflammatory process in affected animals for some days prior to death or humane destruction. As such it is an emotive disease and provokes strong concern from those affected by it. As a result of recent stakeholder meetings and feedback (see letters of support), veterinarians and farmers have indicated that MCF is a real concern and is under-diagnosed for various reasons. In this context there is a need to discriminate rapidly between MCF and mucosal disease (caused by BVDV), which we address in our work package. It is our belief that MCF could increase as farming methods change, particularly with a move to farm more deer and to mix virus-reservoir sheep with various susceptible species including cattle and other exotic species. It is not always practical to keep sheep and susceptible animals far enough apart to avoid the disease and there are no clear guidelines on which management approaches are most likely to protect against transmission of infection. At MRI, we are the only major surveillance and research centre monitoring and working on the control of this important disease in the UK, and are relied on for this service in the rest of the world. Consequently, we are a recognised world centre for advice on MCF. MCF is also important as its pathology will inform us about similar pathologies in other herpesvirus infections (of animals and man), and autoimmune disease, giving a comparative medical dimension to our work that has added value. Moreover, the study on immunisation methods to prevent disease and possibly latency in MCF will impact on other herpesvirus control measures. The recent proof of concept for a mucosal barrier immunisation strategy that prevents disease and persistent infection is an exciting result in this regard. We are particularly interested in revisiting control of IBR by BoHV-1 as this is a virus disease of concern to beef cattle farmers in Scotland. We have had stakeholder meetings (scientists, farmers, veterinarians, pharmaceutical industry, MRI advisory committees) to discuss the relevance of this work package to them and this has informed us of its current content. Importantly, the work package will form an MRI collaborative link with the new EBRC in Edinburgh. This workpackage sits well within SEERAD policy for many reasons. A quality science outcome is of relevance (and benefit) to the scientific community, SEERAD and the international standing of the MRI /SAC. Work on the targeted viral diseases of livestock will have added value by providing a critical mass of expertise in herpesvirus, poxvirus and retrovirus biology that can be the basis of collaborations on virus diseases that might become endemic in Scotland, or increase in prevalence. The work package is of relevance to stakeholders (end users) such as veterinarians, farmers, the pharmaceutical industry, the scientific community and those who make a living in rural Scotland, in addition to the contribution to providing locally produced high quality animal products that benefit the entire population and contribute to the economic growth of Scotland and the health of its residents.