Cloning, expression and biochemical characterization of a polar

advertisement
1
Supplementary data
2
Fig.S1 Multiple sequence alignment
3
4
Multiple sequence alignment of the consensus sequence and the catalytic residues of lipases
homologous to YLIP9.
5
6
Fig.S2 Kinetic parameters of ZZ-YLIP9
7
8
9
Assay was performed with different concentrations of p-NPdecanoate, p-NPlaurate and pNPpalmitate ranging from 0.6 mM to 1.6mM. The kinetic parameters were calculated using the
Lineweaver-Burk plot and Michaelis-Menten equation.
10
Fig. S3 Regioselectivity of ZZ-YLIP9
11
12
13
50 U of lyophilized ZZ-YLIP9 was incubated with 100 µM of triolein in 20 ml hexane for 24 h
at 60 °C/100 rpm. The filtered product was analyzed by (a) TLC and (b) Gas chromatography.
Retention time for oleic acid, diolein and triolein is 27, 32 and 40 min.
14
15
Fig. S4 Thermal kinetics of ZZ-YLIP9
16
17
18
The stability of ZZ-YLIP9 was determined at different temperatures (30-80 0C) by incubating the
enzyme at these temperatures for 2 h. The log of the percentage residual activity was plotted
against different time intervals and thermal kinetic parameters were calculated.
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
Figure S1
AFL1-1
CoPL
ANL
PDL
AOL
Lip18
Lip14
Lip7
Lip8
YLIP9
Lip11
LIP2
CdLIP1
122
130
140
130
143
148
123
133
130
158
194
128
144
.:
SYAALQWMSD--------HAAELGFNPRKLVVCGSSAGGNLTAGVTLLARDRSGPQIRGQ
GFM-TSWVNARAAILGPLSDTIAKYPDYQLVVTGHSLGGAVAAIASLELR---------GFM-NAWRLTRATILDTISAARDQYPDYALTLVGHSLGGAVAALAGTEMQ---------GFM-RSWLHTRTEILPAVTTLRQNYPDYAVTLVGHSLGGAVAALAGLEMR---------GFL-ASWLNTRPIILKHVSAARKQYRDYKVVLVGHSLGGAVAALAGLEMQ---------GFL-KGYLHSFHVVDSIVQRLTEKYPNYQLVITGHSLGGTAATLFGLNYR---------GWN-KAYNETMGIIGDKLADHVNSNPDYRLVVTGHSLGAAIAVLSATSLK---------GFS-KAFTETWHNIGDLLEQHLDSYPDYQLYVTGHSLGAAMALLGATSIK---------GFS-KAFTETWGNIGEDLQKHLDANPDYQLYVTGHSLGAAVALLGATSIK---------GFV-GIFNNSFKQIDSRLNLYKSMYPDYKLVVTGHSLGGAVALLYGVSLR---------GFL-QAYNLAYSEAKGAMDDTFAKYPDYQVIVTGHSLGGAATFLHGINLK---------GFI-QSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLK---------GFI-ESYNNTFNQIGPKLDSVIAEHPDYEIAVTGHSLGGAAALLFGINLK---------:
: : * * *. :
:
Figure S2
(a)
1
173
178
188
178
191
196
170
181
178
106
242
176
192
2.5
1/V (µmol/ml/min)-1
2.0
1.5
1.0
0.5
0.0
-1.0
-0.5
0.0
1.0
1.5
2.0
-1
41
42
0.5
1/S (mM )
(b)
3.5
1/V (µmol/ml/min)-1
3.0
2.5
2.0
1.5
1.0
0.5
0.0
-1.0
43
44
-0.5
0.0
0.5
1.0
1.5
2.0
-1
1/S (mM )
(c)
2
7
1/V (µmol/ml/min)-1
6
5
4
3
2
1
0
-1.0
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
-0.5
0.0
0.5
1.0
1.5
2.0
-1
1/S (mM )
Figure S3
(a)
(b)
3
66
67
68
Figure S4
2.05
Log (%) residual activity
2.00
1.95
1.90
1.85
1.80
1.75
1.70
1.65
0
20
40
60
80
100
120
140
Time (min)
0
69
70
Stability at 30-70 C
Stability at 80 0C
71
4
Download