Hardy-Weinberg Lab (“The Mating Game”) How do you measure Evolution? Allele Frequencies Genotype Frequencies p+q=1 p2 + 2pq + q2 = 1 Introduction In this experiment you and your classmates will represent an entire breeding population. Each member of the class will receive four cards. Two cards have a and two cards have A, all possible alleles for a gene. The four cards represent the products of meiosis. Each “parent” contributes a haploid set of chromosomes to the next generation. Each simulation has a unique set of rules, so follow accordingly. You will track your own set of alleles for each generation and contribute that information to a class data set for analysis. Case I: Ideal Hardy Weinberg Populations Methods 1. 2. 3. 4. 5. 6. You begin this simulation as a heterozygote. Begin simulation by walking around the room. Pick a mate at random and show them your mating dance. Once your mating request is accepted, shuffle your cards behind your back and take the card on top to contribute to the production of the first offspring. Your partner should do the same. Put the two cards together. The two cards represent the alleles of the first offspring. One of you will assume the genotype of this child and record that in your data table for your F1. Shuffle again to determine the genotype of the 2nd offspring, and the other parent will record that new genotype in their F1. You will assume the genotype of the offspring you chose (1 st child or 2nd child) for the next round of mating, so make sure your allele cards reflect what you are able to contribute when you mate again. Repeat steps 2-5 for the next set of generations, recording your genotype after each round. Results Individual Data Case I: Ideal Hardy-Weinberg Population My initial genotype F1 F2 F3 F4 F5 Ideal Hardy-Weinberg Generation AA Aa aa Number of Surviving alleles Total individuals A a p= q= p= q= Class Data Initial Class Frequencies F1 F2 F3 F4 F5 Final Class Frequencies Surviving Genotypes Total alleles Case I: Ideal Hardy Weinberg Populations Debrief 1. What does the Hardy Weinberg equation predict for the new p and q for this simulation? 2. Do the results you obtained in this simulation agree? If not, why not? 3. What major assumptions were not strictly followed in this simulation? Consider what “ideal Hardy- Weinberg conditions” means. Case II: Selection In this case you will modify the simulation to make it more realistic. In the natural environment, not all genotypes have the same rate of survival; that is, the environment might favor some genotypes while selecting against others. An example is the human condition, sickle cell anemia. It is a disease caused by a mutation on one allele, homozygous recessives often die early. For this simulation, you will assume that the homozygous recessive individuals never survive, and that heterozygous and homozygous dominant individuals survive ever time. Methods Once again start with your initial genotype (Aa) and produce fertile offspring as in Case I. There is an important change in this experiment. Every time an offspring with the genotype aa is produced it dies. The parents must continue to reproduce until two fertile offspring are produced. As in Case I proceed through five generations, but select against the aa every time. Individual Data Results Selection Generation Surviving Genotypes Aa aa Total individuals Number of Surviving alleles A a Total alleles p= q= p= q= Class Data Initial Class Frequencies F1 F2 F3 F4 F5 Final Class Frequencies AA Case II: Selection My initial genotype F1 F2 F3 F4 F5 Case II: Selection Debrief 1. Compare the new frequencies of p and q to the initial frequencies in Case I. initial: new: How has the allele frequency of the population changed? Why? 2. Predict what would happen to the frequencies of p and q if you simulated another five generations. 3. In a large population, would it be possible to completely eliminate a deleterious recessive allele? Explain. Case III: Heterozygote Advantage From Case II, it is easy to see that the lethal recessive allele rapidly decreases in the population. However in a real population there is an unexpectedly high frequency of the sickle cell allele in some populations. Case II did not accurately depict a real situation. In the real world heterozygotes have an advantage over homozygous dominant organisms. This is accounted for in Case III. Methods In this case everything is like Case II except if your offspring is AA, flip a coin. If it is heads the individual dies, if it is tails it lives. The genotype aa never survives. Once again simulate five generations, starting with the initial genotype form Case I. Individual Data Results Heterozygote Advantage Generation Case III: Heterozygote Advantage My initial genotype F1 F2 F3 F4 F5 Surviving Genotypes AA Aa aa Number of Surviving alleles Total individuals A a p= q= F1 F2 F3 F4 F5 Final Class Frequencies p= q= Class Data Initial Class Frequencies Total alleles Case II: Heterozygote Advantage Debrief 1. Explain how the changes in p and q frequencies in Case II compare with Case I and Case III. 2. Do you think the recessive allele will be completely eliminated in either Case II or Case III? 3. What is the importance of heterozygotes, the heterozygote advantage, in maintaining genetic variation in populations? Case IV Genetic Drift In each generation, some individuals may, just by chance, leave behind a few more descendants (and genes, of course!) than other individuals. The genes of the next generation will be the genes of the "lucky" individuals, not necessarily the healthier or "better" individuals. It can be the result of a natural disaster (bottleneck effect) or a new colony is established by only a few members of an original population. This case will simulate genetic drift in an isolated population. Methods Resume the original set of heterozygotes in the entire class. Then, randomly divide into 3 groups to simulate several smaller “populations” so that individuals from one isolated “population” do not interact with individuals from another population. Go through 5 generations as you did for Case I. Individual Data Results Case IV: Genetic Drift My initial genotype F1 F2 F3 F4 F5 Genetic Drift Generation AA Case IV: Genetic Drift Debrief Compare allele frequencies (Case I initial to this F5). What do your results indicate about the importance of population size as an evolutionary force? Surviving Genotypes Total Aa aa Number of Surviving alleles Total A a individuals p= q= p= q= Class Data Initial Class Frequencies F1 F2 F3 F4 F5 Final Group Frequencies alleles