BSS (1L) 3.2 g NaCl 3.0 g KCl 1.8 g MgSO4 7H2O 0.69 g CaCl2 2H2O 1.79 g Tricine 3.6 g Glucose 17.1 g Sucrose 1.0 g BSA adjust to pH 6.95 with NaOH _________________________________________________ 4% Formaldehyde (fixing embryos) IMPORTANT! WEAR GLOVES AND MASK AT ALL TIMES! Make about 200 ml in 500 ml bottle or 400 ml in 1000 ml bottle because the solution is sensitive to acids and bases. Add ~160 ml ddH2O to 500 ml bottle Add 8 g (4 g/100 ml) of paraformaldehyde (cold room) Add NaOH pellet Stir on plate until dissolved pH to 7.4 (be very careful!) Fill to 200 ml Label and keep in cold room _________________________________________________ Drosophila Ringer NaCl KCl NaHCO3 CaCl3 g/200 ml 32.5 2.8 4.0 2.4 M 1.1*10-1 1.88*10-3 1 2.3*10-3 1.08*10-3 100 mls 4 1 1 1 NaH2PO4 0.2 1.85*10-4 _________________________________________________ M9 Na2HPO4 KH2PO4 NaCl NH4Cl g/l 6g 3g 0.5 g 1.0 g PH 7.0 _________________________________________________ 10x PBS 80 g NaCl 2 g KCl 14.4 g Na2HPO4 2.4 g KH2PO4 800 ml ddH2O pH to 7.4 w/ NaOH add to 1 L autoclave! _________________________________________________ PEM Buffer (for 200 ml) 40 ml .5 M pipes 0.8 ml 500mM EGTA 0.4 ml 500 mM MgSO4 pH 6.95 filter sterilize store @ 4 degrees Celsius _________________________________________________ 0.5 M EDTA (pH 8.0) 1 90 DDW 186.1 g EDTA 800 ml H2O keep adding NaOH pellets o clear solution bring to 8.0 after solution dissolves _________________________________________________ 100 mM PIPES 10mMEDTA 3.0 g pipes in ~70 ml ddH20 make a 1 M NaOH soln. (1 g/25 mls) add NaOH soln. until pH 7.0 then add 4 mls of 0.25 M EDTA adjust volume to 100 mls _________________________________________________ Potassium Acetate (for Plasmid Prep) To 60 ml of 5 M Potassium acetate, Add 11.5 ml of glacial acetic acid + 28.5 ml of ddH20 Resulting solution is 3 M potassium, 5 M acetate _________________________________________________ SOC Medium Per Liter: 20 g 5g 5g bactotrypone bactoyeast extract NaCl Add to 950 ml H2O and shake to dissolve Add 10ml of 250 mM KCl Adjust to pH 7.0 (~0.2 ml of 5N NaOH) Bring volume to 975 ml Autoclave Add 5 ml of sterile 2 M MgCl2 and 20 ml of sterile 1M glucose _________________________________________________ 20x SSC (4L) 353 g NaCitrate (citirc acid trisodium salt) 701 g NaCl dissolve in 3.5 L H2O adjust pH to 7.0 with 1M HCl (should take ~5mls) make up to 4 L _________________________________________________ 20x TAE 4L | 1L 387.2g | 96.8 g 32.8 g | 8.2 g 23.4 g | 5.84 g | 3600ml| 900ml 136.8ml| 34.2 ml Trizma Base Na Acetate Na2 EDTA ddH2O glacial acetic acid Add H2O to 1L final volume _________________________________________________ 10x TBE 108 g Tris Base 55 g Boric Acid 3.76 g Na2 EDTA (or 40mls 0.5 M pH8) add H2O to 1 L pH to 8.3 _________________________________________________ TBS (1x) Per 1 L 150 mM NaCl = 8.77 g 50 mM Tris-HCl = 50 ml 1.0 M Tris-HCl (pH 8.1) _________________________________________________ 1M TRIS 121.1 g Tris base mix in 800 ml ddH2O Adjust to desired value (estimates in manual) Bring water level to 1 L pH HCl 7.4 7.6 8.0 70 ml 60 ml 42 ml _________________________________________________ 1M TRIS (250 mls total) 30.3 g Tris base dissolve in 150 to 200 mls ddH2O add concentrated HCl (~20 mls probably more) allow to cool to room temp. prior to final pHing pH 4.5 autoclave _________________________________________________ 0.5 M TRIS 60.55 g/L Tris base add ~800 ml ddH2O pH to desired level -- allow to come to room temp. fill to the liter _________________________________________________ YT 16 g bactotryptone 10 g yeast extract 5 g NaCl (10 g agar/L for plates) pH 7.4 _________________________________________________ MINIPREP SOL 1 4.505 g glucose 12.5 mls 1M tris pH 8 10mls .5M EDTA _________________________________________________ TE Per 1 L 2 ml 0.5M EDTA pH 8.0 10 ml 1M Tris pH 8.0 Bring water level to 1 L _________________________________________________ RNAse To make 20ml @ 5mg/ml = 100 mg Dissolve in 10mM Tris pH 7.5 and 15mM NaCl Combine: 200 l Tris (1M, pH 7.5) 60 l NaCl (5M) 19.74 ml ddH2O Aliquot 1ml/ eppy. Label "5mg/ml RNAse crude." Store in -20C in cup in door of freezer _________________________________________________ TE in RNAse 50 ml TE 400 l RNAse Boil for 5 minutes _________________________________________________