Answers to Population Genetics Questions 4-7 4. p = 0.1 q = 0.9 w HH = 1.0 w Hh 0 1.0 w hh = 0.25 s Hh = 0 s hh = 0.75 s=1-w s HH = 0 This simply tells us that there is strong selection against the hh. To calculate allele frequency the next generation, you need to recognize that this is a case of selection against the recessive allele, and use the formula from box 6.7 in your text. q' q(1 sq) 1 sq 2 where q’ = q the next generation (the frequency of the h allele in the next generation). Conveniently, this is the answer to 4b. Plugging in the values for q (.9) and s (.75), you should get q’ = .7452 That’s the answer to question b Notice how sharply the allele frequency has dropped in one generation as a result of strong selection against the hh genotype. a) - You can now answer question a very easily, if you recognize that the frequency of hh individuals the next generation = q2 = (.7452)(.7452) = .5553 c) The frequency of the h allele will continue to decline under strong selection against the hh genotype. You can calculate this decline over the next two generations by pplugging in the value you get for h for each generation into the formula q' q(1 sq) 1 sq 2 This gives you q2 = .5633 and q3 = .4268 There will be some round-off error 5. Light survival = 54/393 = .1374 dark survival = 19/406 = .0468 relative fitness (w for survival) Light = .1374/.1374 = 1 Selection coefficient = 1-w Light = 0 (no selection) Dark = .0468/.1374 = .34 Dark = 1-.34 = .66 6. There are at least two ways of doing this: Here’s one way. A. calculate genoty[pe frequencies: N = total population size = 29+2993+9365 = 12387 HbS/HbS = 29/N = 29/12387 = .0023 HbS/HbA = 2993/12387 = .2416 HbA/HbA = 9365/12387 = .7560 B calculate allele frequencies HbS = .0023 + ½(.2416) = .1231 HbA = 1 - HbS = .8769 C. Calculate expected genotype frequencies under H.W. equilibrium HbS/HbS = (.1231)2 = .0151 HbA/HbS = 2pq = 2(.1231)(.8769) = .2159 HbA/HbA = (.8769)2 = .7690 (note at this point I always add my genotype frequencies to make sure they are ca. = to 1) D. multiply by the total population size to estimate expected frequencies if under H.W. equilibrium Expected number of HbS/HbS = .0151(12387) = 187 Expected number of HbA/HbS = 2674 Expected number of HbA/HbA = 9525 I expect some roundoff error 7. I’ve defined survival as the (observed number)/(expected number). HbS/HbS = 29/187 = .1551 HbA/HbS = 2993/2674 = 1.119 HbA/HbA = 9365/9525 = .9832 The heterozygotes have the highest survival rate, so we divide all genotype survival rates by 1.119 to get w. HbS/HbS = .1386 HbA/HbS = 1 HbA/HbA = .8786 s=1-w HbS/HbS = .8614 HbA/HbS = 0 HbA/HbA = .1214 Again I expect some round-off error