APPENDIX Supplemental Materials: Animal Model: Animals were given heparin (100-200 IU/kg) before the start of occlusion. Lidocaine (2-4 mg/Kg bolus followed by continuous infusion of 50μg/kg/min) was administered to the animal to control episodes of arrhythmias. X-ray coronary angiograms were made, and a coronary guide wire was then advanced into the LAD. A coronary angioplasty balloon sized to match the diameter of the mid LAD was delivered to that segment and inflated at the lowest pressure necessary to occlude distal flow. After 150-minutes, the balloon was deflated and removed to allow reperfusion. Postprocedural pain was managed with Buprenorphine (0.003 mg/Kg) and transdermal Fentanyl patch (25-75μg/Kg/h) for 72 hours. The pig was recovered and the myocardium was allowed to heal for 90 days. Supplemental Table 1: Timeline for evaluation of efficacy and safety. Time Point BSN 1M 3M Post Immediately >24h- 1 Wk 1M 2M 3M (MI) Post MI post TESI 84h Post post Post Post Post MI (TESI) TESI TESI TESI TESI TESI Infarct Creation X Myocardial Biopsy X Bone Marrow X Biopsy Injection X Cardiac Imaging X X X X X X Sacrifice and X Necropsy Blood work X X X X X X X X X Body weight X X X X X X X X Continuous X X X X X X Arrhythmia monitoring Daily Assessment of clinical status by a member of laboratory, weekly health assessment by Veterinarian BSN, baseline; MI, myocardial infarction; M, month; TESI, transendocardial stem cell injection 2 Supplemental Table 2. Pig Study Demographics Placebo MSC CSC/ MSC P-value Age (months) MI 12.7±0.4 13.5±0.9 13.0±0.3 0.7 TESI 16.0±0.4 16.7±0.9 16.1±0.4 0.7 Endpoint 19.0±0.4 19.5±1.3 19.1±0.4 0.7 Body weight MI 27.5±1.2 26.2±1.1 27.3±1.4 0.7 (kg) TESI 30.3±0.9 31.5±1.6 30.4±0.5 0.7 Endpoint 35.3±2.1 36.5±3.3 34.4±2.5 0.9 Sample size (n) TESI 6 6 8 n/a Endpoint 6 4* 7† Follow up After TESI 3.0±0.0 3.0±.0.1* 3.0±0.0 0.5 (months) MSC, mesenchymal stem cell; CSC, cardiac stem cell; MI, myocardial infarction; TESI, transendocardial stem cell injection.* Mean of 4 animals, 2 animals have 4-5 weeks of follow up as explained in the Supplementary results section. **1 animal excluded for delivery error. Cell Manufacturing Process C-Kit+ CSCs (CSCs) were isolated from five to eight 1-2 mm endomyocardial biopsies, obtained from the septal wall of the right ventricle immediately following MI/reperfusion, as previously described(1). Biopsies were grown in Ham’s F12 medium (Life Technologies, Grand Island, NY) containing 10% fetal bovine serum (FBS), 0.2mM L-glutathione, 5 mU/mL erythropoietin, 10 ng/mL human fibroblast growth factor (Recombinant Human FGF-basic PeproTech), and 1% glutamine/penicillin/streptomycin (GPS; Life Technologies). CSCs that migrated out of biopsies were isolated using anti-c-kit (anti-CD117) antibodies (Anti-Mouse CD117 APC eBioscience, and CD117 Alexa Fluor 488 AbD Serotec) conjugated with magnetic microbeads and processed through the VarioMACSTM separation system (Miltenyi). MSCs from the bone marrow aspirate were isolated by Ficoll-density centrifugation and plastic adherence. Cells were cultured and amplified in alpha-MEM medium supplemented with 20% FBS and 1% GPS. MSCs were harvested and cryopreserved(2). Immediately prior to cryopreservation, MSC samples were sent for sterility testing. Immunohistochemistry Swine hearts were fixed for >72 hours in 10% buffered formalin and sliced transversely into 4mm-thick slices from the apex to the base. Slices were embedded in paraffin and processed for microscopy. Twelve slides (four from each zone; IZ, BZ and RZ) were randomly chosen from each 3 animal for quantification of phospho-histone H3 (PHH3) positive nuclei. Each slide was incubated with the primary antibody against PHH3 (Abcam, Cambridge, MA, #14955), followed by a goat secondary anti-mouse IgG antibody (Life Technologies #A11032). DAPI (4', 6-diamidino-2phenylindole) was added to stain nuclei. Endothelial function: Flow mediated dilation (FMD) Endothelial function was measured by the brachial artery FMD method as previously described(3). All FMD (%) measurements were performed on fasted, anesthetized animals with the animal supine and rested for 10 minutes. A limb was comfortably immobilized in the extended position, allowing for ultrasound scanning of the brachial artery. Each vessel image was recorded twice; first at rest, followed by inflation of a cuff to supra-systolic pressure (≈50 mmHg above systolic pressure) for 5 minutes. The second arterial diameter was imaged and recorded after the cuff was deflated. FMD (%) was calculated as [(arterial diameter after 5 min of cuff inflation − arterial diameter at rest)/basal arterial diameter]. Ultrasound measurements of brachial artery diameter were performed at baseline, post-MI and monthly post-TESI. Cardiac MRI Cardiac magnetic resonance imaging (CMR) studies were conducted using a Siemens TIM Trio 3T (Erlangen, Germany) scanner running with Numaris 4 / software version MR B19 using a 4channel body coil with ECG gating and short breath-hold acquisitions. CMR was done at baseline, 1 month post MI, 3 months post MI (pretreatment), 1 month post TESI, 2 months post TESI, and 3 months post TESI (sacrifice). All animals were sedated with ketamine, induced with sodium pentobarbital, intubated and anesthesia was maintained with isoflurane. ECG leads were placed on the limbs and chest for gating image acquisition. The animals were placed in the supine position and a phased-array surface coil was placed over the heart. Steady-state free precession (SSFP) cine images in 2-chamber, 4 chamber and short axis planes (slice thickness 4mm, field of view [FOV] 280mm, matrix 256x80, repetition time (TR) 41msec, echo time (TE) 1.5 msec, number of averages 2, band width [BW] 840kHz, flip angle 80 degrees) were obtained. 4 At end-diastole and end-systole, user defined epicardial and endocardial borders were drawn in contiguous short axis cine images covering the apex to mitral valve plane using Qmass MR 7.2 and 7.5 (Medis Inc) Software to calculate global function. Perfusion imaging was performed after two intravenous bolus injections of gadolinium (Magnevist, Bayer Healthcare) 0.15mmol/kg with an ECG-gated interleaved saturation recovery gradient echo planar imaging pulse sequence (EFGRET-ET). An entire short-axis stack was acquired every 2–4 heartbeats. Imaging parameters were as follows: TR/TE = 7.2 and 1.8 ms; flip angle = 20o; 128 x 128 matrix; 8 mm slice thickness/no gap; bandwidth 125 kHz; 28-com FOV; and 0.5–1 NSA. Using the 16-segment model, infarct zone, border zone, and remote zone was defined as segment 8 and 9, segment 10 and 13, and segment 2 and 4, respectively. Short axis and 2-chamber long axis delayed enhancement (DE) images (slice thickness of 4mm with no gap, FOV 240-340mm, matrix 256x80, TR/TE 450ms/3ms, BW 150kHz, and a flip angle of 25 degrees) were acquired 10 minutes following intravenous infusion of gadolinium. Infarct scar size was calculated from the short axis delayed myocardial enhancement images covering the apex to the mitral valve plane. Epicardial and endocardial contours of the LV were drawn with a semiautomated tool. The intensity of a normal region of myocardium was calculated and scar tissue was determined by using an intensity threshold two standard deviations above normal myocardium. Regional function was measured by tagged CMR images using Diagnosoft 2.71 (Diagnosoft Inc). Three contiguous short axis tagged images encompassing the scar were selected for analysis. User defined epicardial and endocardial contours were drawn to create a 24-segment mesh for each slice, and Eulerian circumferential strain (Ecc) for each segment at each time point of the cardiac cycle was measured. Using the RV insertion as a reference point, corresponding tagged images were classified as either transmural infarction segments (scar ≥ 50% of the respective segment), margin of infarcted area (scar < 50% of the respective segment) and remote area (remote segments to the infarction area). The peak Ecc for each area was calculated by averaging the peak Ecc (more negative is greater contractility) from each individual segments of the specified zone. The peak diastolic strain rate was calculated by averaging the most positive point in the early diastolic portion of the strain rate curve from each individual segments of the specified zone. The same slices and areas were used between all-time points. 5 Perfusion imaging was performed after two intravenous bolus injections of gadolinium (Magnevist, Bayer Healthcare) 0.15mmol/kg with an ECG-gated interleaved saturation recovery gradient echo planar imaging pulse sequence (EFGRET-ET). An entire short-axis stack was acquired every 2–4 heartbeats. Imaging parameters were as follows: TR/TE = 7.2 and 1.8 ms; flip angle = 20o; 128 x 128 matrix; 8 mm slice thickness/no gap; bandwidth 125 kHz; 28-com FOV; and 0.5–1 NSA. Using the 16-segment model, infarct zone, border zone, and remote zone was defined as segment 8 and 9, segment 10 and 13, and segment 2 and 4, respectively. Short axis and 2-chamber long axis delayed enhancement (DE) images (slice thickness of 4mm with no gap, FOV 240-340mm, matrix 256x80, TR/TE 450ms/3ms, BW 150kHz, and a flip angle of 25 degrees) were acquired 10 minutes following intravenous infusion of gadolinium. Infarct scar size was calculated from the short axis delayed myocardial enhancement images covering the apex to the mitral valve plane. Epicardial and endocardial contours of the LV were drawn with a semiautomated tool. The intensity of a normal region of myocardium was calculated and scar tissue was determined by using an intensity threshold two standard deviations above normal myocardium. Vascular density Immunohistochemical staining for von Willebrand factor-related antigen was used to assess the vascular density in samples of infarct zone, border zone, and remote zone for each subject. All images were obtained using 10x magnification and the settings were constant for the entire study. All slides were photographed using a digital camera (Nikon ECLIPSE TS100). The vessel stains were assessed in five randomly selected fields per section, and quantified using Image J software, version 1.44p (National Institutes of Health, USA). Supplemental Results Survival One animal was euthanized 5 weeks after TESI due to respiratory distress less than 24 hours after a surgical intervention (cardiac rhythm monitoring device replacement). Following veterinarian consultation, euthanasia was recommended and performed. A second animal was euthanized 4 weeks after TESI when she was found with respiratory distress associated with a large hematoma adjacent to the trachea. The hematoma was mixed in consistency and was at the same site of the surgical incision on the neck. The veterinarian was consulted for management, efforts to manage 6 the hematoma with drainage and compression were instituted, but finally euthanasia was performed. Transendocardial delivery success rate Transendocardial product was delivered to 20 animals. All injections were successfully delivered to the infarct-border zone with similar unipolar voltage in the injection site (CSCs/MSCs: 6.3±0.2; MSCs: 6.4±0.3; placebo: 6.4±0.2, P=NS). One animal from the CSC/MSC cell group was excluded from the analysis due to delivery error caused by the inability to acquire a complete anatomical map during TESI. Arrhythmia monitoring Swine from all groups were monitored for cardiac arrhythmias after TESI until the end of the study (CSC/MSC n=5; MSCs n=4; Placebo n=4) using an implantable continuous monitoring REVEAL device (Medtronic Inc.). All EKG recordings were read by an interpreter blinded to treatment and verified by an expert Cardiologist. In summary, all arrhythmias were non- sustained Ventricular Tachycardia (duration <30s), self-terminated, and did not require any intervention. Supplementary Table 5 and 6 summarize the EKG findings. Supplemental Table 3. Arrhythmia episodes Duration Number of Animal BPM (sec) beats Episode 1 7 16 286 Pig 1 Episode 2 8 18 273 Episode 3 4 10 261 Episode 1 4 15 333 Pig 2 Episode 2 4 21 333 Episode 1 4 13 231 Pig 3 Episode 2 10 38 353 Episode 3 8 27 250 Pig 4 Episode 1 13 41 286 Date ~9w Post INJ ~9w Post INJ ~9w Post INJ ~3w Post INJ 4w Post INJ ~10w Post INJ ~10w Post INJ ~10w Post INJ 8w Post INJ 7 Supplemental Table 4. Continuous cardiac monitoring after TESI Electrocardiogram Analysis Animal ID No Bradycardia Ventricular Ventricular Arrhythmia Tachycardia Fibrillation (# of episodes) Placebo (Plasmalyte A) Pig 1 X Absent Absent Absent Pig 2 X Absent Absent Absent Pig 3 X Absent Absent Absent Pig 4 Absent 1* Absent MSC (200M) alone Pig 5 X Absent Absent Absent Pig 6 Absent 3* Absent Pig 7 X Absent Absent Absent Pig 8 X Absent Absent Absent CSC (1M) / MSC (200M) Pig 9 X Absent Absent Absent Pig 10 X Absent Absent Absent Pig 11 X Absent Absent Absent Pig 12 Absent 3* Absent Pig 13 Absent 2* Absent *No sustained ventricular tachycardia PEA / Asystole Absent Absent Absent Absent Absent Absent Absent Absent Absent Absent Absent Absent Absent Necropsy Whole body (brain, liver, spleen, kidney, lung and ileum) necropsies were performed to assess ectopic tissue formation. There were no signs of tumorigenicity or ectopic tissue formation on whole body necropsy 3 months following administration of either cell product. One MSC-treated animal had evidence of a mild pneumonia that was not clinically evident while alive and one placebo treated animal had generalized vasculitis, which was considered a pre-existing condition. 8 Supplemental Table 5. Cardiac MRI myocardial infarct size and viability before and after TESI 3m post-MI 3 months Between group % Change Between (before after TESI comparison group TESI) (absolute comparison values) (% change) MI size Placebo 11.8±2.0 10.6±2.2 P=0.02 −12.9±4.2 P<0.001 (% of LV MSC 15.1±1.4 8.7±0.6* −44.1±6.8* mass) CSC/MSC 11.8±1.4 7.2±0.6* −37.2±5.4* MI size Placebo 6.8±1.2 6.8±1.2 P=0.02 −1.4±7.2 P<0.001 (g) MSC 7.8±0.6 5.8±0.5* −30.4.1±4.2* CSC/MSC 6.4±0.7 4.8±0.4* −22.9±4.4* Placebo 52.0±2.9 59.1±4.7 13.5±5.9 Viable MSC 41.1±4.6 63.6±8.5* P=0.6 43.7±13.3* P=0.0002 Tissue (g) CSC/MSC 48.4±2.8 62.7±2.9* 30.9±7.0* LV mass Placebo 58.1±2.6 65.7±4.2 P=0.04 13.0±5.2 P=0.2 (g) MSC 52.2±2.6 67.7±8.7 28.0±10.2 CSC/MSC 54.4±2.9 67.4±3.0 24.8±5.6 9 Supplemental Table 6. Global and Regional Function Baseline 3m post- 3 months Between group % Change Between MI after comparison group (before TESI (absolute comparison TESI) values) (% change) Ejection Placebo 65.0±3.6 43.0±3.5 44.4±3.1 P=0.02 6.7±4.1 P=0.01 Fraction MSC 64.0±3.3 43.6±1.5 46.1±3.4 6.4±3.2 (%) CSC/MSC 62.0±3.6 45.6±1.8 52.4±4.4* 13.9±6.2* Stroke Placebo 29.9±3.2 27.5±3.2 32.3±2.9 P=0.5 22.4±12.0 P=0.008 Volume MSC 26.3±3.7 27.8±2.5 32.1±3.4 21.2±4.7 (mL) CSC/MSC 26.9±3.5 24.8±2.6 36.5±4.0* 47.2±11.1* Cardiac Placebo 3.2±0.3 2.8±0.3 3.2±0.2 P=0.3 15.5±9.5 P=0.1 Output MSC 2.7±0.2 2.7±0.2 3.6±0.2 27.8±13.6 (L/min) CSC/MSC 2.5±0.2 2.4±0.2 3.5±0.3* 50.5±11.3* Diastolic Placebo Not done 0.3 ±0.1 0.3±0.1 P=0.9 −9.0±13.4 P=0.3 Strain MSC 0.3±0.1 0.4±0.1 6.9±6.5 Rate CSC/MSC 0.3±0.1 0.4±0.1 18.9±8.6 MI, myocardial infarction; TESI, transendocardial stem cell injection; MSC, mesenchymal stem cell; CSC, cardiac stem cell. *P<0.05 compared to 3 months after MI References for Supplementary Materials 1. Johnston PV, Sasano T, Mills K et al. Engraftment, differentiation, and functional benefits of autologous cardiosphere-derived cells in porcine ischemic cardiomyopathy. Circulation 2009;120:1075-83, 7 p following 1083. 2. Williams AR, Hare JM. Mesenchymal stem cells: biology, pathophysiology, translational findings, and therapeutic implications for cardiac disease. Circ Res 2011;109:923-40. 3. Liu Y, Xiong Y, Liu D et al. The effect of enhanced external counterpulsation on C-reactive protein and flow-mediated dilation in porcine model of hypercholesterolaemia. Clin Physiol Funct Imaging 2012; 32:262-7. 10 Supplemental Figure 1. Study Design MI RANDOMIZATION BMA RV Biopsy 0 TESI 6 months 3 months Cell manufacturing (n=20) Placebo vs MSCs alone vs. CSC/MSC n=6 n=6 n=8* 1, 2 and 3 months post TESI MRI scan NOGA system MRI PV-loops MI (n=28) 10 injec on sites (5mL) in the infarct-border zone MRI PV-loops (n=20) MRI PV-loops Sac (n=18*) MI, myocardial infarction; TESI, transendocardial stem cell injection; MRI, magnetic resonance imaging; BMA, bone marrow aspiration RV, right ventricle; MSC, mesenchymal stem cell; CSC, cardiac stem cell; * One animal was excluded from this group because of delivery error. 11 Supplemental Figure 2. Cardiac serum markers and white blood cell counts changes after myocardial infarction and transendocardial stem cell injection. 1.6 15 Placebo MSCs CSC/MSC 1.2 WBC (103/m/L) Troponin I (ng/mL) 1.4 Troponin-I A 1.0 0.8 0.6 WBC count B 10 5 0.4 0.2 0.0 3m 2m 1m h 1w h 48 24 TE SI 3m I 1m CPK C 400 CK-MB (ng/mL) 10000 1m 3m SI TE h 24 h 48 1w 1m 2m 3m CK-MB D 300 200 100 5000 1m 2m 3m 3m 1w 2m h 48 1m h 24 1w SI TE 48 h 3m 24 h 1m TE SI MI 3m 0 0 1m 0 MI MI CPK (U/L) 15000 0 0 20000 M 0 0 (A) Troponin I, (B) white blood cells (WBC) count, (C) creatinine phosphokinase (CPK) and (D) creatinine kinase MB (CK-MB) isoenzyme exhibit no significant difference between CSC/MSC, MSC alone and placebo groups at baseline, immediately post-myocardial infarction and 3 months after transendocardial stem cell injection (TESI). 12 Supplemental Figure 3. DE-MRI scar size correlates with gross pathology scar size. The Pearson correlation coefficient between scar size assessed by DE-MRI and the scar size measured by gross pathology was r=0.93 (95% CI, 0.80 to 0.98; p<0.0001). Supplemental Figure 4. An example of vascular (von Willebrand) staining in the infarct zone of an animal from each of the treatment groups. A. Placebo, B. MSC, C. CSC/MSC. Bar = 100 µm for all panels. A B C