Adapted from: Biology Two Activity Manual pages 100 FAMILY PORTRAITS – WHAT PATTERN IS THIS? Intended learning outcomes This activity has been designed to enable you to: identify the features that distinguish four basic patterns of inheritance analyse and synthesise the data in a pedigree, and decide on a likely mode of inheritance of the trait under consideration Draw a pedigree that show a particular pattern of inheritance of a trait Recognize that, in some cases, a given pedigree may not contain sufficient information to reach a conclusion about the mode of inheritance of the trait concerned. Introduction The pattern of occurrence of an inherited trait in a family across several generations can be shown as a pedigree. In a pedigree, a set of symbols is used to denote features of the pedigree (Figure 1) Figure 1 By analysing a pedigree for an unknown inherited trait, it is possible to predict the likely mode of inheritance of that trait, based on whether the trait is dominant or recessive and whether the controlling gene is located on an autosome or the X chromosome. In this activity, we will focus on the four common patterns of inheritance, namely: • autosomal dominant • X-linked dominant • autosomal recessive • X-linked recessive. However, you should note that other patterns of inheritance can also occur. PART A: Pedigree analysis Your teacher will identify whether you are to work alone or in groups. Your task is to analyse the pattern present in a pedigree and to identify the possible mode(s) of inheritance of a trait. In carrying out this task, you will use both methods of exclusion as well as of confirmation. You should note that in some cases a pedigree may not contain the critical information needed to reach a decision and, in that case, the pedigree is said to be non-informative. Pedigrees may be analysed in several ways. Here is one approach that can assist this process. Is the trait dominant or recessive? To help decide whether a trait is dominant or recessive, a pedigree can be examined and the following question asked: A. Does every affected person have at least one affected parent? If the answer is `No', it is reasonable to conclude that the trait is not dominant and so is a recessive trait. If the answer is `Yes', we cannot immediately exclude one or other possibility, and the information in the pedigree is inconclusive. 1. Look at the two pedigrees in figure 2 and answer question A above. Figure 2 2. Notice that in the case of the Smith family, each affected person does not have at least one affected parent; III-2 is the critical person. It is reasonable to conclude that this trait cannot be dominant, but is recessive. 2. Notice that in the case of the Jones family, each affected person has at one affected parent. We cannot conclude on the basis of this information whether the trait is dominant or recessive - both conclusions are valid, so these data are inconclusive. Q1. Knowing that the trait in the Smith family pedigree is recessive, ass ign genotypes, such as RR or Rr or rr, to the persons in that family, as shown, in table 1. If more than one genotype is possible, indicate both in the table. 9.6A Person I-2 I-3 Possible genotype(s) rr II-3 III-1 III-2 Table 1 If we are trying to decide whether a trait is dominant or recessive, and the first question, however, depends on a particular feature being present in the pedigree, and this will not always be the case. B. If the pedigree is inconclusive in terms of question A and the pedigree includes two affected parents with children of both sexes, are all the children affected? If the answer is ‘No', we can reasonably conclude that the trait is not recessive, and so is dominant. If the answer is ‘Yes', we cannot immediately exclude one or other possibility, and the information in the pedigree is still inconclusive. 4. Look at the two pedigrees in figure 3 and answer question B. 5. Notice that in the case of the Liu family, only some of the children (both sexes) of these affected parents show the trait; II-5 and II-6 are the critical persons. Since these children are not affected, it is reasonable to conclude that this trait is dominant. Figure 3 Q2. Knowing that the trait is dominant, assign genotypes to each of the Liu parents (I-1 and I-2) from the following: BB or Bb or bb. 6. Notice that in the case of the Ting family, all the children of these affected parents show the trait. We cannot conclude on the basis of this information alone whether the trait is dominant or recessive - both conclusions are valid Q3. If the trait were dominant, which of the following genotypes would the Ting parents be expected to have: DD or Dd or dd? Q4. If the trait were recessive, which of the following genotypes would the Ting parents be expected to have: RR or Rr or rr? In summary, analysis of a pedigree using questions A and B may allow one of the following conclusions: • the trait is dominant • the trait is recessive • the data in the pedigree are inconclusive. Is the trait autosomal or X-linked? Assuming that you have been able to identify the dominance or recessiveness of a trait, the next issue is to try to decide whether the trait is controlled by a gene that is located on one of the autosomes or whether the gene concerned is located on the X chromosome. C. With large numbers, are there equal numbers of affected males and females? If the answer is ‘Yes' (there is no bias and both sexes are equally affected), then we can reasonably conclude that the trait is not X-linked but is controlled by an allele of a gene on an autosome. If the answer is ‘No' (a bias is apparent and more of one sex is affected than the other), then we can reasonably conclude that the trait is X-linked - that is, controlled by an allele of a gene located on the X chromosome. 7. Look at the Boutros family pedigree in figure 4 which shows the pattern for a dominant trait. What evidence exists in this pedigree to support the conclusion that this is a dominant trait? Figure 4: Boutros family 8. To decide whether this is an autosomal or an X-linked trait, answer question C for the Boutros pedigree. Notice that in the case of this family, a bias is apparent. The affected father in generation I has passed the trait on to all his daughters but to none of his sons in generation II. Since this is a large family, this pattern is more likely to be a bias than a chance effect. It is reasonable to conclude that this trait is X-linked, so this pedigree shows an X-linked dominant pattern. Q5. Are equal numbers of males and females affected in this large pedigree? Which sex appears to be more likely to be affected by this trait? Q6. Assume that the father (I-2) has the genotype XDY. Write genotypes for all other members of this family in a copy of the table 2 . Person Possible genotype(s) I-2 XDY I-1 II-2 II-3 III-2 Table 2 9. Look at the pedigree for the inheritance of a form of red -green colour blindness in the Jantzen family (figure 5), which shows the inheritance of a recessive trait. What evidence exists in this pedigree to support the conclusion that this is a recessive trait? Figure 5: Jantzen family 10. Now answer question C for the Jantzen pedigree. Notice that in the case of this family, a bias is apparent. Notice that the affected father (I-2) has passed the trait on to three of his grandsons in generation III. This is unlikely to be a chance effect. There is an excess of affected males compared with females. It is reasonable to conclude that this trait is X linked and this pedigree shows an X-linked recessive pattern of transmission. Q7. Do all the daughters of the male I-2 have to be heterozygous carriers red-green colour blindness? 11. Look at the pedigree for the inheritance of a recessive trait in th e Evans family (figure 6). What evidence exists in this pedigree to support the conclusion that the trait is recessive? Figure 6: Evans family 12. To decide whether this trait is autosomal or X-linked, answer question C for the Evans pedigree. Notice that in the case of this family, a bias is apparent. The affected mother (I-1) has passed the trait on to all of her sons, but to none of her daughters. Overall, more males are affected than females. This is unlikely to be a chance effect. It is reasonable to conclude that this trait is X - linked. This pedigree in fact shows an X-linked recessive pattern of transmission. In summary, based on the appearance of certain patterns in a pedigree, a pedigree may be identified as showing an X-linked inheritance. These patterns are: • transmission of a dominant trait from an affected male to all of his daughters and none of his sons • a recessive trait from an affected male to some of his grandsons • a recessive trait from an affected female to all of her sons and none of her daughters. If these patterns are absent, it is reasonable to conclude that the pattern is autosomal. In the case of an autosomal trait, affected parents can pass the trait to children of either sex and, overall, in a large pedigree, about equal numbers of males and females will be affected Q8. What is the minimum number of generations required for a pedigree? Q9. Extend the Jones family pedigree in figure 2 so that it is no longer inconclusive, but is an example of a dominant trait.