Sample Factors\Laboratory Test Results

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tranSMART RC2 Release – Test Case (Working Document)
I.
Test identification
tranSMART instance
< tranSMART URL >
Test case
tranSMART_test_serial_low_dim
Description
Analyze and export ‘low dimensional serial’ data with tranSMART
Successful End Condition
(Acceptance Criteria):
Open Issues:
II.
All the Test Steps of the ‘Test case’ should pass
none
Tester identification
Tester Name:
Tester’s Computer ID:
Tester User ID:
Tester Site:
tranSMART role(s) tester is assigned to:
Browser used for this test: FIREFOX
Testing start (date + time):
1 tranSMART_test_serial_low_dim
Testing end (date + time):
tranSMART RC2 Release – Test Case (Working Document)
III.
Test results
Objectives
Verify that analysis (‘Advanced Workflow’) can be generated with ‘serial low dimensional’ data.
Verify that ‘serial low dimensional’ data sets can be exported out of tranSMART.
Prerequisites
Role assigned to the tester’s user account: ‘Spectator’ (at a minimum)
Internet browser: Tester should have Firefox installed on his/her computer
Login: Tester should be able to launch the tranSMART application successfully (link provided on page 1 of this Test Case)
Test data: The study ‘RC2 testing \test_Serial_LDD’ should be available in the application with the following nodes:
\Design Factors\Trial Arms\diabetes
\Design Factors\Trial Arms\ healthy
\Design Factors\Trial Arms\ obese
\Sample Factors\Demographics\Age
\Sample Factors\Demographics\Height [cm]
\Sample Factors\Demographics\Weight [Kg]
\Sample Factors\Laboratory Test Results\General Chemistry\Glucose Sober (mg/dl)\Day 00
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tranSMART RC2 Release – Test Case (Working Document)
\Sample Factors\Laboratory Test Results\General Chemistry\Glucose Sober (mg/dl)\Day 07
\Sample Factors\Laboratory Test Results\General Chemistry\Glucose Sober (mg/dl)\Day 14
\Sample Factors\Laboratory Test Results\General Chemistry\Glucose Sober (mg/dl)\Day 21
\Sample Factors\Laboratory Test Results\General Chemistry\Glucose Sober (mg/dl)\Day 28
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tranSMART RC2 Release – Test Case (Working Document)
Tests
Step #
Instructions
Expected Results
Actual Results or Deviations/Comments
1
Go to the Analyze tab.
...\Day 00\
...\Day 07\
...\Day 14\
...\Day 21\
...\Day 28\
Add Screenshot
Open the program ‘RC2 testing’.
Drag and drop the Study ‘test_Serial_LDD’ as subset 1.
appears in the first box.
Go to the ‘Advanced Workflow’ and select the ‘Line
Graph’ analysis.
...\Diabetes\
...\Healthy\
...\Obese\
Drag and drop the node ‘Sample Factors/Laboratory Test
Results/General Chemistry/Glucose Sober (mg/dl)’ under
‘Time/Measurement Concepts’.
Add comment:
appears in the second
box.
Line Graph generated.
Drag and drop the node ‘Design Factors/Trial Arms’
under ‘Group Concepts’.
Click the ‘Run’ button.
2
Under ‘Advanced Workflow’, select ‘Correlation Analysis’
from the ‘Analysis’ drop down.
Drag and drop the nodes ‘Sample
Factors/Demographics/Age’, ‘Height [cm]’ and ‘Weight
[Kg]’ under Variables.
Drag and drop the node ‘Sample Factors/Laboratory Test
Results/General Chemistry/Glucose Sober (mg/dl)’under
Variables.
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...\Age\
...\Height [cm]\
...\Weight [Kg]\
...\Day 00\
...\Day 07\
...\Day 14\
...\Day 21\
...\Day 28\
appears in the box.
Correlation Table and
Graph generated.
Add Screenshot
Add comment:
Pass/Fail/
Not Executed
tranSMART RC2 Release – Test Case (Working Document)
Step #
Instructions
Expected Results
Actual Results or Deviations/Comments
Scatter Plot generated
with Linear Regression
Result table.
Add Screenshot
...\diabetes\
...\healthy\
...\obese\
Add Screenshot
Click the ‘Run’ button.
3
Under ‘Advanced Workflow’, select ‘Scatter Plot with
Linear Regression’ from the ‘Analysis’ drop down.
Add comment:
Drag and drop the node ‘Sample Factors\Laboratory Test
Results\General Chemistry\Glucose Sober (mg/dl)\Day
07’ under ‘Independent Variable’.
Drag and drop the node ‘Sample Factors\Laboratory Test
Results\General Chemistry\Glucose Sober (mg/dl)\Day
14’ under ‘Dependent Variable’.
Click the ‘Run’ button.
Click the ‘Download raw R data’ link. Save the
downloaded zip file. Open the folder and verify the
‘ScatterPlot’, the ‘Outputfile’ and the ‘LinearRegression’
files.
4
Under ‘Advanced Workflow’, select ‘Box Plot with
ANOVA’ from the ‘Analysis’ drop down.
Drag and drop the nodes ‘Sample Factors\Laboratory
Test Results\General Chemistry\Glucose Sober
(mg/dl)\Day 00’ and ‘…\Day07’ under ‘Independent
Variable’.
Drag and drop the node ‘Design Factors/Trial Arms’
under ‘Dependent Variable’.
5 tranSMART_test_serial_low_dim
appears in the
‘Dependent Variable’
box.
Box Plot generated and
ANOVA Result tables.
Add comment:
Pass/Fail/
Not Executed
tranSMART RC2 Release – Test Case (Working Document)
Step #
Instructions
Expected Results
Actual Results or Deviations/Comments
...\diabetes\
...\healthy\
...\obese\
Add Screenshot
Click the ‘Run’ button.
5
Under ‘Advanced Workflow’, select ‘Table with Fisher
test’from the ‘Analysis’ drop down.
Drag and drop the nodes ‘Sample Factors\Laboratory
Test Results\General Chemistry\Glucose Sober
(mg/dl)\Day 00’ under ‘Independent Variable’.
Activate ‘Enable binning’. Activate ‘Bin the Independent
Variable’.
appears in the
‘Dependent Variable’
box.
Add comment:
Tables generated with
Fisher test.
Drag and drop the node the node ‘Design Factors/Trial
Arms’ under ‘Dependent Variable’.
6
Click the ‘Run’ button.
Go to the ‘Data Export’ and export the low dimensional
data.
Add Screenshot
Add comment:
Download the zip file and open the low dimensional data
files.
Verify the Glucose values.
6 tranSMART_test_serial_low_dim
Pass/Fail/
Not Executed
tranSMART RC2 Release – Test Case (Working Document)
Screenshots
Step #1:
Step #2:
Step #3:
Step #4:
Step #5:
Step #6:
Step #7:
Step #8:
Step #9:
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tranSMART RC2 Release – Test Case (Working Document)
Step #10:
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tranSMART RC2 Release – Test Case (Working Document)
IV.
Test Summary
tranSMART instance
< tranSMART URL>
Test case
tranSMART_test_serial_low_dim
Purpose
Analyze and export ‘low dimensional’serial data using tranSMART.
Function/Analysis
Pass
Fail
Not Executed
Executed By
Re-Execution Required?
Reviewed By
Open Issues
9 tranSMART_test_serial_low_dim
Deviation Summary
Date
Date
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