Supplementary Information SUPPLEMENTARY RESULTS PCI of rGel/EGF on A-431 xenografts A superficial wound could be observed over or in close vicinity to the tumor in the PCI of 2.5 µg rGel/EGF-treated animal experiencing complete response and in one of the PCI of 5 µg rGel/EGF-treated animals. The wounds healed, however, efficiently and no wound or scarring was detectable within 20 days after treatment (Fig. 4E). PCI of rGel/EGF cytotoxicity in HNSCC cell lines with diverse differentiation and EGFR expression For maximal treatment specificity, rGel/EGF should be minimally toxic when given as monotherapy and exert high targeted cytotoxicity when activated by PCI. Estimating the ratio between the targeting index assessed with and without PCI revealed a ≥ 5-fold larger targeting index when rGel/EGF was combined with PCI in all the HNSCC cell lines (Fig. 5C). The TIPCI among the HNSCC cell lines was found to correlate with the TI without PCI (Suppl. Fig. S3D), except in the SCC-026 cells where PCI augmented the effect of rGel/EGF to the largest extent, increasing the targeting index of rGel/EGF by a factor of 40.6 (Fig. 5C and Suppl. Fig. S3D). Establishment and characterization of HNSCC xenografts The four HNSCC cell lines were inoculated s.c. into athymic nude mice in order to establish HNSCC xenografts. Two of the cell lines, SCC-026 and -040, formed measurable tumors five days after inoculation (Suppl. Fig. S4A). Both xenograft tumor models were found to be medium aggressive and all mice were sacrificed within 35 or 40 days after inoculation for SCC-026 and SCC-040, respectively. Tumors from both SCC-026 and SCC-040 xenograft models were found to become darker and softer after reaching a size of approx. 900 and 400 mm3, respectively (3-4 weeks after injection) (Suppl. Fig. S4B). Dissection showed that the tumors were filled with fluid and histological examination of SCC-040 tumor harvested 38 days after inoculation (tumor volume ~ 1000 mm3) confirmed a cystic structure (Suppl. Fig. S4C). Our findings are in agreement with previous reports describing cystic metastasis from HNSCC in patients. Histological evaluations 1, 2 and 3 weeks after inoculation identified the SCC-026 tumors as well differentiated, keratinized squamous cell carcinoma (Suppl. Fig. S4D). No major cystic formations were, however, detected by H&E staining of paraffin sections in SCC-026 xenografts the first two weeks after inoculation. Antitumor effects following PCI of rGel/EGF on SCC-026 xenografts were, therefore, measured 3-8 days post treatment (i.e. 7-12 days after inoculation) to avoid any interference from cystic formation. Eight days post treatment, initiating cyst formation was observed in all tumors, including the untreated tumors, indicating that this is a characteristic of the tumor model and not a result of the treatment (Fig. 6C). SCC-074 and SCC-099 did not form tumors in any of the inoculated animals (Suppl. Fig. S4A). SUPPLEMENTARY DISCUSSION The rGel/EGF production The objectives of this study were adapted according to the low yield and concentration of rGel/EGF in the primary production. The rGel/EGF product was also found to have reduced N-glycosidic activity compared to rGel itself. Several approaches must therefore be considered in future studies to optimize the rGel/EGF production. Firstly, a re-optimization of the codon choice to improve protein expression in E. coli, as well as modifications of the experimental conditions during protein expression (such as temperature, OD and IPTG concentration) should be explored to increase the rGel/EGF yield. Secondly, the current configuration of rGel/EGF may not be the optimal one, as the orientation may impact on the ratio of inclusion bodies relative to soluble proteins formed in the production as well as on the cytotoxicity profile. Also, the possibility that rGel domains responsible for enzymatic activity are masked in the current orientation cannot be ruled out. Comparisons should therefore be made with EGF fused to the N-terminal of rGel (EGF/rGel). Orientation of the rGel/EGF construct is further expected to influence on the ability to form trimers. No rGel/EGF trimers were identified after incorporating an isoleucine-zipper trimer, which indicated misfolding of the protein, in accordance with the presence of inclusion bodies in the rGel/EGF solution. The low molecular weight of the 42 kDa monomer might present an obstacle for systemic delivery due to renal clearance and future work should therefore include attempts to optimize the size (e.g. by incorporating a peptide/protein linker), as well as to increase the purity, ribosome inactivating activity and stock concentration of the final product.