sp2 hybridized systems: aromatic compounds Major concepts sp2 hybridization allows for extended pi systems that are cyclic or acyclic If orbitals do not overlap because they are “perpendicular” to each other, they are considered “orthogonal” to one another. Count the number of electrons in a given pi system by counting all pi bonds and lone pairs that are overlapped, but not those orthogonal to the system If there are 4n+2 electrons in a cyclic, planar pi system, then it is aromatic. The properties and reactivity of the nucleobases of nucleic acids is dictated by their aromaticity. Vocabulary Aromatic Huckel’s Rule orthogonal Nucleobases Students should be able to: Recognize aromatic and non-aromatic systems Draw orbital overlap pictures of pi systems, including aromatic compounds Daily Problems 1. Draw an orbital picture of the following molecules, drawing all p orbitals and any orbitals holding lone pairs. Be as clear as possible with their geometry. Indicate which are orthogonal to one another. O H3C C C H H H C H H C C C O H H The 2 sets of p orbitals are orthogonal to each other. The sp orbital is orthogonal to both p orbitals. The sp2 orbitals are orthogonal to the p orbitals. 2. When we draw an orbital structure for a compound that has multiple resonance structures, we need to take into account all the resonance structures. To do this, we need to follow this rule: if an atom is sp3 hybridized in one resonance structure and sp2 hybridized in another, we should consider the atom to be sp2 hybridized in drawing an orbital picture. Draw the orbital pictures of structures A and B as if they were simple Lewis structures (if an atom is sp3 in the Lewis structure, draw it that way.) Then draw the orbital picture of the hybrid taking into account the rule described above. How does this structure account for the partial double bonds between each of the carbons? - structure A H structure B hybrid H H H incorrect assumption If all are sp2 hybridized, then the p orbital overlap accounts for partial double bond character 3. Draw orbital overlap pictures for these molecules. Draw top perspective and side perspective. Indicate which orbitals are orthogonal. Example: p orbital A. p orbital p orbital C. orthogonal p orbital p orbital p orbital H H H H N H H p orbital p orbital B. p orbital p orbital p orbital orthogonal p orbital p orbital H orthogonal H H H N H H H H p orbital 4. Draw a VB orbital picture of the pi system of pyridine and explain why the lone pair is not counted in the pi system. N N pyridine Side perspective The lone pair on nitrogen is in an sp2 hybridized orbital, which is 90o (orthogonal) to the pi system of the ring. This means the lone pair and the pi system do not overlap. 5. How many electrons are in each pi system. Label any electrons that are orthogonal to the pi system. all lone pairs drawn in are orthogonal NH NH O 6 electrons 6 electrons 4 electrons over 5 p orbitals isolated- no pi system/ conjugation 6 electrons 6 electrons over 7 p orbitals 6. Which of these systems is aromatic? Explain. Yes- 14 electrons, cyclic, contiguous No- not cyclic No- only 8 electrons Yes- 6 electrons Lone pair on the bottom N is not in conjugation Yes- 10 electrons One of the lone pairs on O is in conjugations (not both) No- 8 electrons Yes- 6 electrons, contiguous The lone pair on N is in conjugation Cumulative problems 7. Which of these aromatic systems is “electron rich” compared to benzene? Which is “electron poor” compared to benzene. Explain with a resonance structure. NH2 O NH2 electron rich ring O electron poor ring 8. Compare the relative stabilities of the indicated lone pairs. Which is more reactive? - localized -not part of the pi system -not as stabilized -more reactive -very stable = not very reactive -part of the 6 electrons in the aromatic pi system 9. For the nucleobases below, draw resonance structures in which the amide functional groups have been redrawn. How many electrons are in each of these nucleobase systems? Indicate which pi electrons and lone pair electrons are and are not part of the pi system. Example: Problems: O O NH ₂ N N O NH NH N N H N H N N NH ₂ guanine adenine N H NH O thymine N O H 6 electron system 10 electron system O O NH ₂ O N N H cytosine N O NH ₂ N N H O 6 electron system N H NH NH N H uracil N NH ₂ 10 electron system NH O N O H 6 electron system Extension problems 10. Draw the structure of guanine (see above.) Label each nitrogen atom as a Lewis acid or Lewis base. Explain how you came to these conclusions.