Curriculum vitae of Dr. Asma Haque Assistant Professor (T.T.S) Dept. of Bioinformatics and Biotechnology, GCUF (HEC approved Ph. D. supervisor) Specialties: 1. Molecular Biology of infectious diseases 2. Drug resistance patterns and mechanisms of bacterial pathogenesis 3. Pharmacognosy 4. Bioinformatics Administrative Responsibilities: 1. 2. 3. 4. Coordinator, Department of Bioinformatics and Biotechnology Member, university discipline committee (Examinations) Member, Board of Studies (Dept. of Bionformatics & Biotechnology, GCUF) Member, Admission & Fee concession committee (Dept. of Bionformatics & Biotechnology, GCUF) 5. Member, Purchase Committee (Dept. of Bionformatics & Biotechnology, GCUF) Personal Data: Father’s name: Dr. Abdul Haque Name: Asma Haque E-mail: asma_haque@yahoo.com Phone: Domicile: FSD 92-300-7640089; 92-41- 8530516 Academic qualifications: Sr. No Degree Year University Division Subject ___________________________________________________________________________ 1. Ph.D. 2008 Quaid-i- Azam University, ISD --Biotechnology 2. M. Phil. 2001 University of Agriculture, FSD 1st Chemistry 3. M.Sc. 1999 University of Agriculture, FSD 1st Chemistry 1 Theses: 1. “Phytochemical and microbiological screening of indigenous plants” submitted as partial fulfillment for the degree of M. Sc. 2. “Phytochemistry and inhibitory effect of Acacia arabica, Eucalyptus camaldulensis and Commiphora mukul on oral bacterial population” submitted as partial fulfillment for the degree of M. Phil. 3. “Molecular detection of Salmonella typhi strains and their drug resistance pattern” submitted as partial fulfillment for Ph.D. degree. Distinctions: 1. Awarded scholarship during Ph. D. under “International Research Support Initiative Programme” by Higher Education Commission at London School of Hygiene and Tropical Medicine (LSHTM), London, UK. 2. Awarded UGC Scholarship during M.Phil studies. Publications: International: 1. Baker, S., Y. Sarwar, H. Aziz, A. Haque, A. Ali, G. Dougan, J. Wain, and A. Haque. The detection of Vi negative Salmonella enterica serovar Typhi in the peripheral blood of typhoid patients in the Faisalabad region of Pakistan. J. Clin. Microbiol. 2005. 43 (9): 4418-4425. IF 4.162 cit:24 2. Haque, A., A. Haque, Y. Sarwar, and A. Ali. Multiplex PCR for drug resistance against standard antityphoid drugs in blood samples of typhoid patients. FEBS Journal (Formerly European Journal of Biochemistry) 273. sp1. June 2006 pp: 74-5 IF 3.79 3. Mohsin, M., A. Hussain, M. A. Butt, S. Bashir, A. Tariq, S. Babar, A. Ali, A. Haque, Y. Sarwar, and A. Haque. Prevalence of Shiga Toxin-Producing Escherichia coli in diarrheal patients in Faisalabad region of Pakistan as determined by multiplex PCR. J. Infect Developing Countries 2007; 1(2):164-169. IF 1.2 cit: 4 2 4. Ali. A, Abdul Haque, Asma Haque, Y. Sarwar, M. Mohsin, S. Bashir and A. Tariq. Multiplex PCR for differential diagnosis of emerging typhoidal pathogens directly from blood samples. Epidemiol. Infect.. June 2008. pp: 1-6. IF : 2.365 cit: 13 5. Raza, A., Y. Sarwar, A. Ali, A. Jamil, A. Haque, and A. Haque (2011) Effect of biofilm formation on the excretion of Salmonella enterica serovar Typhi in feces. Int J Infect Dis, 15 (2): 747-52 IF : 2.6 cit : 1 6. Naqvi, A. R., M. Ishfaq, Z. Khan, S. A. Nagra, I. H. Bukhari, A. I. Hussain, N. Mahmood, S. Anjum, A. Haque and T. Bukhari (2012) 99mTc labeled levofloxacin as an infection imaging agent:a novel method for labeling levofloxacin using cysteine·HCl as co-ligand and in vivo study. Turkish Journal of Chemistry. 36 (2): 267-277. IF: 0.76 7. Khalid, R. R., Hussain, B., Ali, M., Ahmad, M. S., Haque, A., Qamar, H (2012). Development of Bioinfo-Portal Tool for the Analysis of Genomic and Proteomic Data. Journal of life sciences. 6 (5): 485-88 Local: 1. Bashir, S., A. Haque, N. Ahmed, A. Raza , A. Haque , Y. Sarwar , A. Ali, S. Bashir, M. Ahmed, I. Ahmed, and J. Ahmed. 2005. Significant incidence of typhoid in Hepatitis C patients. The Professional Medical Journal. 12:287-294 cit: 1 2. Haque, A. , A. Haque, Y. Sarwar, A. Ali, S. Bashir, A. Tariq , and M. Mohsin. 2005. Identification of drug resistance genes in clinical isolates of Salmonella typhi for development of diagnostic multiplex PCR. Pakistan Journal of Medical Sciences. 21: 402-407 IF: 0.20 cit: 1 3. Jamil. M, S. Bashir, M. Mohsin, A. Tariq, A. Haque , Y. Sarwar ,A. Ali, and A. Haque. 2007. Differentiation of common gram negative pathogens by PCR-ribotyping. Pakistan Journal of Medical Sciences. 23:233-237 IF: 0.20 cit: 1 3 4. Ali. A, A. Haque, Y. Sarwar, A. Haque, M. Mohsin, A. Afzal, T. Iftikhar and A. Tariq. 2008. Nested PCR based diagnosis of Salmonella enterica serovar Paratyphi A directly from blood samples. Pakistan Journal of Medical Sciences. Vol. 24 No. 4 545-549 IF: 0.20 cit: 2 5. Bashir. A., A. Haque, S. Bashir, A. Ali, Y. Sarwar, and A. Haque. 2009. Molecular analysis of drug resistance in clinical isolates of MDR Salmonella enterica serovar Typhi in Faisalabad, Pakistan. Pakistan J. Zool. 41:363-369. IF 0.20 Submitted 1. Ehsan, B., A. Haque, M. Younas, T. Shaheen, T. Huma, S. Sattar, S. Nadeem and Z. Iqbal. Assessment of genomic diversity of cotton (G. hirsutum) using simple sequence repeat (SSRs) markers through Genetic Analysis Software. Submitted in International Journal of Agriculture and Biology. 2. Shamim. A , Y. Sarwar, M. I. Rajoka , A. Haque, A. Haque and B. Hussain. Relationship of oxidative stress markers with DNA damage and homocysteine in Salmonella typhi infected patients. Submitted in T. J. Gastroenterology. Book : Khalid, R. R., A. Haque and M. Ali (2012). Image processing based diagnosis of thyroid abnormalities. LAP LAMBERT Academic Publishing. Germany. Book Chapters (Accepted): 3. Sarwar, Y., A. Ali and A. Haque. Current status of antimicrobial resistance in enteric bacterial pathogens. Frontiers in Clinical Drug Resistance – Anti-infectives. Bentham Science Publishers. 4. Haque, A., Y. Sarwar, T. Gulzar, A. Ashraf, and A. Haque. Dengue infection – ways to minimize the risk by using appropriate diagnostic approaches. Technical Expert Network Publishers, Singapore. 4 Research Supervision: MS (Completed): 1. Zahra Irum: Genetic Analysis of Autosomal Recessive Non Syndromic Deafness in Pakistani Families. 2. Muhammad Atif: Computational disease diagnosis and drug development by using biomarker detection sensors. 3. Amara Mehmood: Enhancement of Water Use Efficiency in Tobacco through Transgenic Approach. 4. Rehan Khalid: Image processing based diagnosis of thyroid abnormalities 5. Taiyba Younas : Molecular analysis of drug resistance in local isolates of Salmonella enterica serovar Paratyphi A 6. Imran Gulzar: Molecular detection of human invasive salmonellosis MS (in progress): 1. 2. Zahra Batool: Correlation between antimicrobial resistance of ESBL producing coliforms from human clinical isolates and edible animal meat Ambreen Ayub: Cellular Gene expression of immune responsive genes in HBV infected patients. BS (Completed): 2010: 1. Salman Siddiqui : Establishment of molecular diagnostic strategy for diagnosis of HBV by targeting its S, P and X regions. 2. Fareeha Arooj: Application of different molecular analysis softwares for marker assisted selection (MAS) in F2 population of wheat for rust resistance genes 5 3. Ayesha Siddiqa : Application of bioinformatics techniques for DNA fingerprinting of groundnut genotypes by molecular markers 4. Asha Hussain: Improvement in Marker Assisted Selection (MAS) for the biotic stresses in wheat with the help of bioinformatics tools 5. Beenish Ehsan: Application of different genetic analysis soft wares for the estimation of genetic diversity in cotton through DNA markers 6. Summera Sattar: Molecular characterization of wheat genotypes for rust resistance genes with the application of genetic analysis soft wares 2011: 1. Asma Naz: Correlation of cadmium concentration with various blood biochemical parameters and its application in development of database. 2. Komal Rana : Amplification of actin gene from Penicilium chrysogenum for its phylogenetic analysis 3. Beenish Riaz: Profiling of genetic diversity among bread wheat cultivars by using RAPD markers 4. Zahra Batool : Lead intoxication and evaluation of oxidative stress in humans and its bioinformatics elucidation. Presentations: 1. Phytochemical and microbiological screening of indigenous plants. Asma Haque, Riaz Ahmed, Farukh Jabeen, Sofia Naz and Khalil-ur-Rehman.. Presented at 10th National Chemistry Conference, held at Department of Chemistry, Quaid-i-Azam University, Islamabad, 28-30th October, 1999. 2. Studies on phytochemistry and antimicrobial activities of Rubia cardifolia, Zingiber zerumbet and Solanum nigrum. Farukh Jabeen, Riaz Ahmad, Sofia Naz, Asma Haque and M. Arshad. Presented at 10th National Chemistry Conference, held at Department of Chemistry, Quaid-i-Azam University, Islamabad, 28-30th October, 1999 6 3. Different levels of hemolytic activity of plant saponins against erythrocytes of various animals. Asma Haque, Farukh Jabeen, Riaz Ahmed, Sajjad-ur-Rehman, and Shahbaz Hussain. Presented at 1st International and 11th National Chemistry Conference held at Department of Chemistry, University of Peshawar, 10-14th April, 2000. 4. Evaluation of inhibitory effect of Eucalyptus camaldulensis on oral bacterial population and its phytochemcial analysis. Asma Haque, Zahida Parveen, Riaz Ahmed, Farrukh Jabeen, and Javed Anver Qureshi. 7th Eurasia Conference on Chemical Sciences held at H. E. J. Research Institute of Chemistry, Karachi. 5. Molecular detection of Salmonella typhi strains and their drug resistance pattern. Asma Haque, Abdul Haque, Yasra Sarwar and Aamir Ali. Presented at 15th National & 5th International Chemistry Conference held at Quaid-i-Azam University, Islamabad. Nov 24-27, 2004. 6. Emergence of Vi negative strains of Salmonella typhi: a need to review typhoid vaccines. Yasra Sarwar, Asma Haque, Aamir Ali, Saira Bashir and Abdul Haque. 15th National & 5th International Chemistry Conference, Nov 24-27, 2004. Quaid-i-Azam University, Islamabad. 7. Development of a multiplex PCR for detection of Salmonella typhi and related pathogens. Aamir Ali, Abdul Haque, Asma Haque and Yasra Sarwar. Presented at 15th National & 5th International Chemistry Conference held at Quaid-i-Azam University, Islamabad. Nov 24-27, 2004. 8. Molecular typing of Salmonella enterica serovar Typhi isolates from various countries in Asia by a multiplex PCR assay on variable number tandem repeats. Journal club seminar presented at NIBGE . Nov, 2004. 7 9. Molecular diagnosis of clinical isolates of MDR Salmonella enterica serovar Typhi. Asma Haque, Yasra Sarwar, Aamir Ali, Saira Bashir, Ayesha Tariq, Mashkoor Mohsin, Mahwish Jamil, Aasia Bashir and Abdul Haque. Poster Presentation at FAOBMB Symposium on Genomics and Proteomics in Health and Agriculture, November 20-23, 2005 Lahore, Pakistan. 10. Identification of integrons and drug resistance genes in clinical isolates of extraintestinal Escherichia coli. Saira Bashir, Asma Haque, Yasra Sarwar, Aamir Ali, Ayesha Tariq, Mashkoor Mohsin, Mahwish Jamil, Aasia Bashir and Abdul Haque. Oral Presentation at FAOBMB Symposium on Genomics and Proteomics in Health and Agriculture, November 20-23, 2005 Lahore, Pakistan. 11. Genetic study of drug resistance patterns of locally isolated Vi positive and Vi negative strains of Salmonella typhi. Yasra Sarwar, Asma Haque, Abdul Haque, Aamir Ali, Saira Bashir, Ayesha Tariq and Mashkoor Mohsin. Poster Presentation at FAOBMB Symposium on Genomics and Proteomics in Health and Agriculture, November 20-23, 2005 Lahore, Pakistan. (Got 1st Prize) 12. Multiplex PCR for drug resistance against standard antityphoid drugs in blood samples of typhoid patients. Asma Haque. Oral presentation at 31st FEBS Congress. 24th- 29th June, 2006. Istanbul, Turkey. 13. Molecular detection of Salmonella enterica serovar Typhi strains and determination of their drug resistance pattern. Asma Haque, Yasra Sarwar, Aamir Ali, Saira Bashir, Ayesha Tariq, Mashkoor Mohsin and Abdul Haque. Poster presentation at National Symposium on Biotechnology for Economic Prosperity 24-26 July 2006, Nathiagali, Pakistan. (Got 1st Prize) 14. Epidemiology of Shiga Toxin Producing Escherichia coli in Pakistan as determined by Multiplex Polymerase Chain Reaction. Mashkoor Mohsin, Asma Haque, Yasra sarwar, Aamir Ali, Saira Bashir, Ayesha Tariq and Abdul Haque. Poster presentation at National 8 Symposium on Biotechnology for Economic Prosperity 24-26 July 2006, Nathiagali, Pakistan. 15. Emergence of Vi negative strains of Salmonella typhi: A need to review typhoid vaccines. Yasra Sarwar, Aamir Ali, Asma Haque, Saira Bashir, Ayesha Tariq, Mashkoor Mohsin and Abdul Haque. Oral presentation at National Symposium on Biotechnology for Economic Prosperity 24-26 July 2006, Nathiagali, Pakistan. 16. Relationship of phylogenecity and antibiotic susceptibility in the clinical isolates of uropathogenic Escherichia coli. Saira Bashir, Yasra Sarwar, Aamir Ali, Asma Haque, Ayesha Tariq, Mashkoor Mohsin and Abdul Haque. Poster presentation at National Symposium on Biotechnology for Economic Prosperity 24-26 July 2006, Nathiagali, Pakistan. 17. Purification and Characterization of Polysaccharide Antigens from Salmonella Species for Future Use in Conjugate Vaccine. Aamir Ali, Asma Haque, Abdul Haque and Yasra Sarwar. Poster presentation at Global Vaccine Research Forum and Parallel Satellite Symposia, 3 – 6 Dec, 2006, Bangkok, Thailand. 18. Molecular typing of Salmonella enterica Serovar Typhi isolates by a Multiplex PCR Assay on Variable Number Tandem Repeats. Yasra Sarwar, Asma Haque, Abdul Haque, and Aamir Ali. Second National Conference on Health Biotechnology 27-28 May, 2008, Islamabad. 19. Lead intoxication and evaluation of oxidative stress in humans with its bioinformatic elucidation. Zahra Batool, Asma Haque, Muhammad Ibrahim Rajoka, Sobia Idrees, Tahsin Gulzar and Beenish Riaz. Oral presentation at 10th International and 22nd National Chemistry Conference 2011 held on November 21-23, 2011 at Department of Chemistry & Biochemistry, University of Agriculture, Faisalabad. 20. Application of different genetic analysis softwares for the estimation of genetic diversity in cotton through DNA markers. Beenish Ehsan, Asma Haque, Muhammad Younas, 9 Zafar Iqbal and Summera Sattar. Presented at International conference on applied genetics and biotechnology held on 7- 10 Dec, 2011 at Centre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisalabad. 21. Molecular characterization of wheat genotypes for rust resistance genes with the application of genetic analysis softwares. Summera Sattar, Asma Haque, Beenish Ehsan, Muhammad Younas and Zafar Iqbal. Presented at International Conference of Safe Food and Human Health held on January 10-11, 2012 at G. C. University, Faisalabad. Workshops/ Symposia: 1. 29th postgraduate course on “Nuclear and other advanced techniques in agricultural and biological research” held at National Institute for Agriculture and Biology (NIAB) from 15-26th October, 2001. 2. Workshop on “Vaccine development, production and utilization in developing countries” held at Agha Khan University, Karachi (8- 10 Aug, 2004). 3. A course on “Safety measures in the use of radiation in agriculture and biology” held at National Institute for Agriculture and Biology (NIAB), Faisalabad from 29th Sep – 3rd Oct, 2004. 7. National Workshop on Molecular Detection and Genotyping of HBV/HCV and Quality Assurance Issues, December 20-24, 2004. Held at Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan. Organizer. 8. Ist Health Biotechnology Conference, Jan 27-28, 2005, University of Health Sciences, Lahore. 9. National Symposium on Biotechnology for Economic Prosperity. 24-26 July 2006, Nathiagali, Pakistan. 10. Workshop on In Silico tools in Medicinal Chemistry held at department of Chemistry, Quaid-i-Azam University, Islamabad from 22-25 Dec, 2011. 10 11. Symposium on DNA barcoding. 30th January 2012. Held at National Institute for Biotechnology and Genetic Engineering, Faisalabad. 12. Workshop on Molecular Diagnosis of Dengue Virus held at Health Biotechnology Division, National Institute for Biotechnology and Genetic Engineering, Faisalabad from 03- 05 Feb, 2012. 13. Applications of Biotechnology in Health and Agriculture held at Department of Bioinformatics and Biotechnology, G. C. University, Faisalabad on March 28th, 2012. Organizer and speaker. Employment: 1. Trainee Research Fellow (BPS 17) in National Institute for Biotechnology and Genetic Engineering (NIBGE) Faisalabad for three years ( March 3rd 2004 - March 2nd 2007) 2. Assistant professor (BPS 19) in Govt. College University Faisalabad from Oct 2nd, 2009 to date. 11