EREN DATIS Protocols Revised Aug 30 2013

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DATIS: Decomposition of Aquatic and Terrestrial Invaded Systems
EREN, last updated August 2013
Novelty and Justification:
Leaf decomposition is a critical process that mediates nutrient availability, accumulation of
organic matter, and carbon storage. Decomposition rates are controlled by a combination of
litter quality and site factors, many of which are driven by regional climate patterns. These
processes have been studied extensively for many species yet litterbag protocols vary between
terrestrial and aquatic experiments and few studies have examined both ecosystems in concert.
Introduction and spread of invasive species also have the potential to strongly influence leaf
decomposition via inputs of high quality leaf litter and modifications to the soil environment.
Often, but not always, decomposition of invasive species is faster than native counterparts
(Ehrenfeld, 2003, 2010). However, it is not yet clear how invaded a site needs to be before
ecosystem processes are visibly altered. The EREN model provides an opportunity to address
this question across a wide range of species and/or environments.
Objectives:
1. To develop and test integrative protocols for aquatic and terrestrial decomposition
2. To experimentally test whether decomposition rates of invasive species are faster than
the decomposition rates of invasive species are faster than the decomposition rates of
native species across a wide range of environments as previously suggested by
Ehrenfeld (2003, 2010).
3. To identify the invasive abundance necessary to affect decomposition rates in
ecosystems.
Required Materials:
 115 pre-assembled litterbags = 8” x 8” (~20 cm2) custom bait bags purchased from
Memphis Net at Twine with 1/16” (~1.5 mm) openings on the bottom and 1/4” (~6.4 mm)
openings on the top.
 MarshallTown Mason’s Line (1000ft, white, available at Home Depot)
 230 non-rusting landscape stakes/staples (e.g.Earth Staples sold at
http://www.gardeners.com/Earth-Staples/11858,default,pd.html)
 115 numbered aluminum tags (e.g. Ben Meadows # 152505, 152506, etc. – be sure to
order sequential numbers, not multiples of the same set)
 PVC Flags/Flagging/Other Site Markers of Choice (e.g. Ben Meadows #107663)
 Water thermometer (e.g. Ben Meadows #111052)
 Soil thermometer (e.g. Ben Meadows #225976)
 Top loading balance, accurate to 0.001 g
 Drying oven
 Latex gloves (will wear these every time you have any contact with the leaf litter)
 115 Gallon-sized plastic Ziploc bags
 115 full-sized mailing envelopes (9” X 12”)
 Newspaper
 Optional: Soil and water HOBOS data loggers
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A. Gathering Leaves and Filling the Litterbags *Latex gloves required
Gathering Green Leaves for Analysis of Plant Functional Traits (including C, N, Lignin,
and Surface Area):
Select a woody invasive species from the table below (Table 1) and a morphologically and
functionally similar woody native species in your location. Both species should of local
relevance. Other pairs may be approved by the lead scientists upon request.
Table 1.
Invasive
Example Native Pairing
Buckthorn
Black Cherry or Gray Dogwood
Honeysuckle
Spice Bush
Norway maple
Sugar Maple, Red Maple, or Sycamore
Privet
Texas Mountain Laurel
Tree of heaven
Smooth Sumac
For each species, while the leaves are still fully green (ideally during summer peak growth and
no later than September 15-20th), gather 5-6 fully expanded and hardened leaves from each of
5-10 adult plants without obvious symptoms of pathogen or herbivore attack and without
substantial cover of epiphylls. (The replication for this material is based on individual plants so
ideally you want to collect 5 to 6 leaves per plant from at least 5 different individuals, though 10
individuals is ideal). If your plant has compound leaves, you will only need up to 2 compound
leaves per plant. Leaves should come from the same plants from which you are planning to
collect senesced material for the decomposition study. [Note: if you cannot gather green leaves
by the September 20th deadline, this should not deter you from participating in the project but
please send green fresh samples next year]
Put the leaves in sealed plastic bags to minimize desiccation. To minimize bending of the leaves,
keep the samples flat using cardboard panels or strong paper sheets.
Mail the leaves to the address below using the Priority Mail Padded Flat Rate Envelope service
(Envelope size: 12-1/2" x 9-1/2") provided by the US Postal Service. In the East Coast, it takes
about 2 -3 days for packages to arrive and the cost should be less than $10. Write PLEASE DO
NOT BEND on the envelope:
Jose-Luis Machado
Department of Biology
Swarthmore College
500 College Avenue
Swarthmore, PA 19081.
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Please email Jose-Luis (jmachad1@swarthmore.edu) when you ship the leaves so that he
knows to look for them.
Gathering Senesced Leaves for the Decomposition Experiment
After leaf fall in the autumn (November-December), collect senesced leaves from the same
plants that you used to gather green leaf material by gently shaking branches and collecting the
falling leaves on a tarp or gently brushing senescing leaves off the branches. Senesced material
can be collected into communal bags (but keep the two species in separate bags; garbage bags
work well). Please specify the collection methods you use in your datasheet.
Immediately bring the leaf litter that will be used for the decomposition experiment to the lab,
keeping the two species types separate as you work. For species with compound leaves
remove the leaflets from the leaf stalk, flatten the leaflets in newspaper, and allow the leaves to
dry at room temperature (~25º C) for 24-48 hours or until constant weight. You may discard the
leaf stalk after these steps are complete. For species with simple leaves, flatten the leaflets in
newspaper, and allow the leaves to dry at room temperature (~25º C) for 24-48 hours or until
constant weight.
Once the samples have reached constant weight, remove them from the paper. Weigh out sets
of 6  0.2 g of leaves at different percents of the two species to create samples with the
following five litter combinations (we use notation native (N) and invasive (I) as the species
pair):





Litter Combination 1 (LC1): 100%N/0%I (6g/0g)
Litter Combination 2 (LC2): 75%N/25%I(4.5g/1.5g)
Litter Combination 3 (LC3): 50%N/50%I(3g/3g)
Litter Combination 4 (LC4): 25%N/75%I (1.5g/4.5g)
Litter Combination 5 (LC5): 0%N/100%I (0g/6g)
For each sample, record the mass to the nearest 0.001 g, (Initial Mass, 25C) and place each
sample set in a separate mesh bag along with a numbered tag. It is helpful to work with the
small mesh side of the litterbag DOWN to minimize loss of material. Record this tag number
(Tag), along with the % of each species (N/I). Close the open side of the bag and weave mason
line up and down through the holes of the mesh edge to secure the leaves. Make 23 litterbag
samples for each litter combination (5 replicates x 2 locations x 2 collection times + 3 travel
controls). This will result in a total of 115 bags that will be used for the experiment, including 15
travel bags that will be used to correct for leaf loss during travel to the site and for oven-dry
correction.
Using your remaining litter, you will need to calculate an air- to oven- dry conversion factor.
Weigh out 5 sets of samples (6 grams for each preferred, but can adjust down as necessary if
you are running low on leaf material) for each species. Record these weights. Place these
samples into the oven to dry at 65ºC until they are at constant weight (24 to 48 hours). Weigh
these samples again and use this final mass to calculate the “25ºC to 65ºC” conversion factor.
After the leaf bags are prepared, one each of the 5 different treatment leaf bags should be
strung together in random order using a single, long piece of mason’s line to weave through the
mesh (as depicted in Fig. 1). This will create a total of 23 strings of leaf bags: 3 will be travel
bags, 10 will be placed in the aquatic site and 10 will be placed in the terrestrial site.
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Figure 1. Example string of the 5 litter combinations
The strings of bags should be stored in covered plastic containers until they can be placed at
the selected sites.
C. Installing the Litter Bags
*Latex gloves required
Bags should be installed as soon as possible after they are made (fall or early winter).
Select two invaded sites for litterbag placement: a stream placement site and an upland site
close to the stream. The location of placement in the stream should be in an area that will cover
the bags with flowing water at most times, preferably downstream from a riffle. The upland site
should be near the stream (record distance), but should not be in the riparian zone or where the
leaf packs would be submerged. If possible, litter bags be placed so that they are not on a steep
slope; if on a slope, then place the litterbags perpendicular to the slope so that all the litterbags
in a replicate string are at the same elevation on the slope.
At the predetermined field upland location, lift off and set to the side the litter from a spot large
enough to place each string of mesh bags in five replicate blocks (see figure below). Place the
leaf-filled mesh bags with the smaller mesh size DOWN, so that they have flat contact at the soil
surface, pin each individual bag in place using the non-rust staples or stakes. You can use a
single staple to pin two adjacent bags on the same string by placing the pin in the corners as
shown in the figure below. Mark the location with a flag, or if you are in a higher-traffic site and
you are concerned about people removing your materials, you can use a triangulation method to
mark the location of your bags by marking nearby areas – how you mark your samples is up to
you, but the key is that you are able to relocate them. Record the date of placement
(deployment), topographic position (topo), and surrounding vegetation (canopy).
X 5 replicate blocks
Optional: Attach the sensor of a HOBO temperature logger to the soil
surface (beneath the litter layer) near one of your replicate blocks. Set the
logger to record temperatures at hourly intervals for the duration of the
experiment.
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Repeat the installation procedure in the stream location. At the predetermined field stream
location, place the leaf filled mesh bag at the stream bottom with the smaller mesh side DOWN,
and pin it in place using the non-rust staples or stakes. Mark the location with flagging.
Optional: To monitor water temperature place the sensor of one or more HOBO temperature
loggers into the water at the stream location and covered with water at all times and preferably
downstream from a stream riffle. Set the logger to record temperatures at hourly intervals for the
duration of the experiment.
Take the travel bags to the field and back during installation and treat them as you would your
actual samples. When you are leaving the field, place the travel bags into a plastic bag. When
you return to the lab, remove each litterbag from the plastic bag, cut open the bag and gently
take out the leaves and gently rinse each leaf with DI water (over a sieve) to mimic how you will
rinse soil that is attached to the leaves on your actual samples. Then, transfer the leaves and
the sample ID tag into a clean paper mailing envelope, and place the envelopes into an oven to
dry at 65ºC for 48 hours (until constant weight). Weigh the litter from these oven-dried bags to
calculate your “travelling and processing correction factor”. After weighing, place each ovendried travel sample in a clean paper envelope and mail them to Jose-Luis Machado (address
above) for nutrient analysis.
D. Gathering MetaData*
General Site Variables:
Site name: provide a name for the site that includes 6-12 characters, no spaces
Habitat Type: specify as Aquatic or Terrestrial
Litterbag installation date: record the DD_MM_YYYY of litterbag installation
Litterbag retrieval date: record the DD_MM_YYYY of litterbag retrieval
Latitude and Longitude: Record the GPS coordinates at the center of the site in the format:
Latitude: (decimal degrees) and Longitude: (decimal degrees)
Elevation (m): Record the elevation of the center of the site in meters
Aspect (): If on sloped ground, record the azimuth that the slope faces; if on flat ground, record
the azimuth as “na”
Slope (%): If on sloped ground, record the average % slope across the site. If the plot is on flat
ground, record the slope as “0”.
Avg. Annual Temperature: Record the temperature in degrees Celsius.
Temperature data source: Indicate if the source is LOCAL or obtained from the web. If the
source is the WEB, indicate the site used to obtain the data.
Average Annual Precipitation: Record the precipitation in mm.
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Precipitation data source: Indicate if the source is LOCAL or obtained from the web. If the
source is the WEB, indicate the site used to obtain the data.
Metadata Specific to Terrestrial Habitats:
Type of Soil: Record the soil type as based on the USGS Soil Survey
(http://websoilsurvey.nrcs.usda.gov/app/HomePage.htm)
Soil: Soil samples should be collected at each sampling location to characterize the site.
Use a soil or bulb corer and collect mineral soil to a 10 cm depth at 6 different locations within
your site. Place each sample in a separate plastic bag and mix thoroughly by kneading each
bag. Use these 6 samples soil to analyze the soil for pH, texture, and soil organic matter as
well as soil moisture:
Soil moisture: weigh out 5 g of each soil sample and place it in a sealable plastic bag to
measure soil moisture. Weigh it fresh, then dry it at 65º C and reweigh it to get oven-dry
mass.
Soil organic matter: can be analyzed by weighing before and after using a muffle furnace
to burn off the carbon from the samples at 350 C. If you do not have one of these available
at your institution, these samples can be analyzed at Carthage College
(contact Tracy
Gartner to make arrangements)
Soil pH: make a 1:2 slurry of soil:water, shake, and then allow to settle for an hour. Read
the pH of the supernatant using a standard pH meter.
Collect a representative sample of the forest floor (soil organic horizon (Oi/Oe/Oa) by using a
wooden square or other straight edge to mark a 25 x 25 cm square in the forest floor at each
location. Cut along the straight edge and collect all of the forest floor within the square down to
the beginning of the mineral soil layer. Place the sample in a brown bag labeled with the
watershed, location, and date, and dry at 30ºC. Weigh (dry-weight) this sample to determine
forest floor biomass.
% Bare soil: Rank the level of bare ground (neither forest floor or vegetation) for the plot from 0
to 5 using the following scale:
1) < 25%
2) 25 to 49%
3) 50 to 74%
4) 75 – 95% 5) 96 to 100%
Soil temperature: Record the soil temperature (4 cm depth) at the time of sampling
Metadata specific to Aquatic Habitats:
Stream Order: preferably 1-2 but 3 would also work
Type of substrate: specify whether rocky or soft-bottom
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Stream width: measure from wetted perimeter to wetted perimeter when deploying litterbags
(cm)
Stream depth: measure (cm every 20 - 25 cm in stream width or 4 – 5 depths, so that cross
sectional area can be calculated (cm2).
Cross sectional area: using width & depth measurements (cm2).
Stream velocity: using a flow meter or a piece of fruit timed over a known distance
(cm/second)
Flow rate: using the product of stream velocity and cross sectional area (cm3/second)
Water temperature at the time of deployment/retrieval
General Vegetation Variables
Dominant Plant Species: Please list the dominant 2-3 plant species and their relative cover in
the area, by ranking each on the following scale:
1) < 25%
2) 25 to 49%
3) 50 to 74%
4) 75 – 95% 5) 96 to 100%
Invasive Species List: Please list the invasive plant species present at the site.
Plot description: Please include a general description of the plot. Include such information as
presence of trails, excessive vine coverage, deer browse, and cover of invasive
plant species.
E. Collecting the Litter Bags
*Latex gloves required
Aquatic leaf litterbags should be collected 1-1.5 months and 2.5-3 months after deployment,
while the terrestrial leaf litterbags should be collected at 2.5-3 months and 12 months. On each
sample date, retrieve one string of mesh bags from each replicate block at each location. For
terrestrial bags, brush off all external leaves and slide each mesh bag (you will need to cut the
mason’s line) so that it lies flat into a separate clean plastic bag for transport back to the lab.
For aquatic bags, gently blot water off with paper towel and then slide each mesh bag so that it
lies flat into a separate clean plastic bag (again, you will need to cut the mason’s line) for
transport back to the lab.
When you return to the lab, remove each litterbag from the plastic bag, cut open the litterbag
and gently take out the leaves. Using gloves, remove roots, insects, label, and other materials
that have entered the mesh bag. Gently rinse each leaf with DI water (over a sieve) to rinse soil
that is attached to the leaves. Then, transfer the leaves and the sample ID tag into a clean
paper mailing envelope, and place the envelopes into an oven to dry at 65ºC for 48 hours (until
constant weight, approximately 2-4 days).
After your samples have dried, remove the envelopes from the oven and gently remove the
contents of each envelope, placing them on a clean aluminum tray or rolled out aluminum foil.
Record the label number and weigh the remaining material to determine the oven-dry mass of
the remaining leaf material (Final Leaf Mass). Use the “25ºC to 65ºC” conversion you obtained
earlier to determine the final leaf mass for each sample (Corrected Final Mass). Save all dried
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material along with the sample ID tag (this can be kept in the paper bag at room temperature
~25ºC) for later reference, nutrient analysis and ash-free dry weight corrections.
At the final collection period remove the HOBO data loggers from the field and download the
data. (It would be better to download the data at each sampling period if possible). If not using
HOBO, then record soil (4 cm depth) and water temperature at the time of collection using
standard soil and water thermometers.
F. Calculations
A template for data entry is available on the EREN DATIS website at www.erenweb.org/datis.
[Note: All masses should be in grams]
Mass(i) = Initial air-dry or 25°C mass
ODMass(i) = Initial oven-dry (65°C) mass
CF = 25°C-to-65°C conversion factor = ODMass(i) / Mass(i)
TPCF = travelling and processing conversion factor = ODMass after travel and processing /
Mass(i)*CF
Mass(t) = 25°C leaf mass at time t
ODMass(t) = Oven-dry leaf mass (65°C) at time t = Mass(t) * CF
%ODMass Loss(t) = [(ODMass(i) - ODMass(t)) / ODMass(i)] * 100
Decomposition Rate (t) = %ODMass Loss(t) / Days of Incubation
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