Paleotropics Neotropics Table S1. List of data sets used for assessing the magnitude of correlations for bat species richness and species composition, respectively, between full data sets and species subsets with different numbers of species deleted either at random, or according to their rarity in the respective assemblage. 1 Country Location1 Mexico Mexico Mexico Costa Rica Panama Panama Panama Panama Panama Panama Panama Trinidad Trinidad French Guiana Ecuador Ecuador Ecuador Brazil Brazil Brazil Bolivia Vietnam Ivory Coast Ivory Coast Ivory Coast Ivory Coast Madagascar Yucatan Yucatan Chamelaa) La Selva Fort Sherman BCNM BCNM BCNM BCI BCI Soberanía Victoria-Mayaro Victoria-Mayaro St. Eugène Podocarpus Tiputini Tiputini Una Roncador b) BDFFP Yungas de La Paz Kim Hy Comoé c) Comoé c) Taï Taï Bemaraha a) Sampling method2 GN AS GN GN GN GN CN AS GN CN GN GN CN GN GN GN CN GN GN GN GN GN GN CN GN CN GN Sobs3 20 17 22 36 36 29 34 20 36 35 38 34 24 36 27 49 26 19 21 40 22 22 35 39 18 21 8 No. of rare species4 13 2 13 18 25 18 23 10 22 21 25 24 9 16 15 28 10 12 9 26 14 12 25 25 5 14 2 forest/habitat type other than tropical wet/moist forest: a) tropical dry forest, b) Cerrado, c) biome transition (forest-savanna mosaic) BCNM = Barro Colorado Nature Monument, BCI = Barro Colorado Island, BDFFP = Biological Dynamics of Forest Fragments Project 2 sampling methods: GN = ground nets, CN = (sub)canopy nets, AS = acoustic sampling 3 Sobs: number of species observed 4 species representing < 1% of total relative abundance Fig. S1. The magnitude of correlations across sites between the full dataset and subsets of data for species richness SR (a), and for species composition as represented by the ordination scores of the first axis of a detrended correspondence analysis DCA1 (b) and the Jaccard index J (c). Results shown comprise datasets from 19 tropical localities based on ground-level mist netting. Subsets were generated by deleting different numbers of species either at random or based on species rarity. The bold line connects median correlations r(SUB x FULL) for 100 randomly chosen subsets at each of five species pool sizes; the broken lines indicate upper and lower 95th percentile correlations. Open circles denote non-random subset correlations, with species eliminated based on up to three abundance thresholds, whenever applicable (relative abundance < 0.1% ( ), < 0.5% ( ), < 1% ( )). Una − Brazil Victoria−Mayaro − Trinidad Yucatan − Mexico Yungas − Bolivia Sherman − Panama Soberanía − Panama St.Eugène − French Guiana Taï − Ivory Coast Tiputini − Ecuador Comoé − Ivory Coast Kim Hy − Vietnam La Selva − Costa Rica Podocarpus − Ecuador Roncador − Brazil BCI − Panama BCNM − Panama BDFFP − Brazil Bemaraha − Madagascar Chamela − Mexico (a) 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 r(SRSUBxSRFULL) 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 10 20 30 40 10 20 30 40 10 20 30 Number of species 40 10 20 30 40 10 20 30 40 Una − Brazil Victoria−Mayaro − Trinidad Yucatan − Mexico Yungas − Bolivia Sherman − Panama Soberanía − Panama St. Eugène − French Guiana Taï − Ivory Coast Tiputini − Ecuador Comoé − Ivory Coast Kim Hy − Vietnam La Selva − Costa Rica Podocarpus − Ecuador Roncador − Brazil BCI − Panama BCNM − Panama BDFFP − Brazil Bemaraha − Madagascar Chamela − Mexico (b) 1.0 0.8 0.6 0.4 0.2 0.0 1.0 r(DCA1SUBxDCA1FULL) 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 10 20 30 40 10 20 30 40 10 20 30 Number of species 40 10 20 30 40 10 20 30 40 Una − Brazil Victoria−Mayaro − Trinidad Yucatan − Mexico Yungas − Bolivia Sherman − Panama Soberanía − Panama St. Eugène − French Guiana Taï − Ivory Coast Tiputini − Ecuador Comoé − Ivory Coast Kim Hy − Vietnam La Selva − Costa Rica Podocarpus − Ecuador Roncador − Brazil BCI − Panama BCNM − Panama BDFFP − Brazil Bemaraha − Madagascar Chamela − Mexico (c) 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 r(JSUBxJFULL) 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 10 20 30 40 10 20 30 40 10 20 30 Number of species 40 10 20 30 40 10 20 30 40 Fig. S2. The magnitude of correlations across sites between the full data set and subsets of data for species richness SR (a), and for species composition as represented by the ordination scores of the first axis of a detrended correspondence analysis DCA1 (b) and the Jaccard index J (c). Results shown comprise 8 data sets based on canopy-level mist netting or acoustic sampling (AS). Subsets were generated by deleting different numbers of species either at random or based on species’ rarity. The bold line connects median correlations r(SUB x FULL) for 100 randomly chosen subsets at each of five species pool sizes; the broken lines show upper and lower 95th percentiles. Open circles denote non-random subset correlations, with species eliminated based on up to three abundance thresholds, whenever applicable (relative abundance < 0.1% ( ), < 0.5% ( ), < 1% ( )). (a) r(SRSUBxSRFULL) 1.0 0.8 0.6 0.4 0.2 0.0 Tiputini − Ecuador Victoria−Mayaro − Trinidad Comoé − Ivory Coast Taï − Ivory Coast BCI − Panama BCNM − Panama AS−BCNM − Panama AS−Yucatan − Mexico 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 10 15 20 25 30 35 10 15 Number of species 20 25 30 35 (b) r(DCA1SUBxDCA1FULL) 1.0 0.8 0.6 0.4 0.2 0.0 Tiputini − Ecuador Victoria−Mayaro − Trinidad Comoé − Ivory Coast Taï − Ivory Coast BCI − Panama BCNM − Panama AS−BCNM − Panama AS−Yucatan − Mexico 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 10 15 20 25 30 35 10 15 Number of species 20 25 30 35 (c) r(JSUBxJFULL) 1.0 0.8 0.6 0.4 0.2 0.0 Tiputini − Ecuador Victoria−Mayaro − Trinidad Comoé − Ivory Coast Taï − Ivory Coast BCI − Panama BCNM − Panama AS−BCNM − Panama AS−Yucatan − Mexico 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 1.0 0.8 0.6 0.4 0.2 0.0 10 15 20 25 30 35 10 15 Number of species 20 25 30 35