Chromosomes and Human Inheritance Notes Basic Chromosome Structure o Long arm; Short arm; Centromere; Chromatids; Thousands of genes per chromosome o Review Human Karyotype Facts 23 pairs = 46 total Each pair is a homolog (each contains instructions for same proteins as the other, but possibly different versions or alleles for it) 22 autosomes 2 sex chromosomes XX = Female XY = Male Y much smaller than X Y determines gender o Wildtype (Original, often most common) vs. Mutant Phenotype (Newer; often less common) o Homogametic (XX - Females) vs. Heterogametic Sex (XY - Males) o Pedigrees Shaded = Trait vs. Unshaded = No Trait Trait skips generation = Recessive Trait Never skips and lots of shading = Dominant Trait Trait shows up more often in a gender = Sex-Linked Circles = Females Squares = Males Blood Types o O = Original or Wildtype = Most common = No type = No antigen = Antibody vs. A & B = Universal Donor = Only receives from O o A = First mutant = 2nd Most common (especially among northern Europeans) = Type A antigen = Antibody vs. B = Donates to A or AB = Receives from A or O o B = 2nd Mutant = Most recent mutant = 3rd Most Common (especially certain Asian races) = Type B antigen = Antibody vs. A = Donate to B or AB; Receives from B or O o AB = Combination of both mutants = rarest = Type A & B antigens = No antibodies = Donate to AB only = Universal receiver Linked Genes o Genes on the same chromosome that sometimes do not follow Mendel's law of independent assortment o Breaking Linked Genes Crossing over More likely to cross over together if further apart on same chromosome. If too close, linkage will be broken often leading to Genetic Recombination of what should be "linked" traits Genetic Recombination = When offspring looks different than what they should if genes are linked Parental Type = When offspring looks like parents as they should if the genes are linked Recombinants = When offspring looks unlike parents as they should if genes are linked (means crossing over happened) More recombinants = Smaller recombination frequency (how often it is crossed over together) = More crossing over breaking the link = Genes are closer on chromosomes Thomas Hunt Morgan o Father of molecular genetics o Studied sex-linkage and gene mapping Chromosomal Mapping (Linkage; Cytogentic; Physical; Sequencing) o Linkage Map Based on recombination frequencies between different genes that should be linked Genetic Map Unit (centimorgan; named after Morgan) = Recombination Frequency of 1% The higher the frequency the further the gene is to another gene Looking at the relationships between many genes you can map the whole chromosome o Cytogenic Maps Based on gene expression Example: Genes on the same chromosome are often deactivated together o Physical Map Tagging the DNA at a known gene sequence to see where it lights up on a picture Often done with radioactive isotopes o Sequencing Map Based on computer analysis of the actual human genome Human genome project – all genes have been sequenced and are searchable on a computer Hemizigous genes o Only one allele for trait o X-linked traits in males Y chromosome has no instruction because it is smaller, so X is the only one that instructs on trait) Leads to expression of trait more often in males since they cannot have a protective gene or be carriers (Example: Hemophilia) o X-Inactivation In females on of the X’s always deactivates to avoid double the proteins being made That means that only one set of instructions is active Deactivated X is crumbed up and called Barr Body Mutations (Changes in DNA structure or sequence due to damage or errors in replication) o Chromosomal (Alter entire structure of chromosome and often affect multiple genes) Deletion (Piece of chromosome missing) Duplication (Piece of chromosome doubles) Inversion (Piece of chromosome detaches and reattaches upside-down) Translocation (Piece of chromosome detaches and attaches to a non-homolog) Non-disjunction (Chromosomes fail to separate properly during Meiosis) Aneuploidy (Abnormal number of chromosomes because of non-disjunction; Examples: 2n +1, which is one extra copy of something or 2n -1, which is one less copy of something) Monsomy (1 copy of the chromosome, instead of 2) Trisomy (3 copies of the same chromosome, instead of 2) Polyploidy Abnormal number of copies of the entire set of chromosome Instead of 2n, cell is 3n, 4n, 5n, 6n, 8n, etc. That means every single chromosome instead of being in pairs, is in quartets for example (4n) o Gene (Alter sequence of 1 gene; does not affect other genes) Point mutations (Only one thing changes) Frame shift (A mutation that causes the entire code to shift in an direction or another) Substitution (One base replaces another that should be there, often a point-mutation: single substitution) Insertion (An extra base is added – causes frame shift) Deletion (A base is deleted – causes frame shift) o Missense mutation (Any mutation that causes the DNA code to no longer code for necessary protein or function) Extranuclear genes o Genes not associated with chromosomes o Plasmids in plants and bacteria o Chloroplasts in plants and algae o Mitochondria in eukaryotes o Patterns of inheritance do not follow Mandel o For example, all mitochondrial DNA is inherited from mother since only thing that comes from male game is DNA This means all mitochondrial DNA comes from mothers only With the exception of very small mutations we all share the same mitochondrial DNA This hints at possible “Eve” effect – all came from same woman Mitochondrial DNA may be a better way to differentiate races than standard DNA analysis which reveals we are all 99.999% the same. Human Inheritance Patterns o Many genes show epistasis & pleitropy relationships Epistasis – One gene affects how another one is expressed Pleitropy – One gene affects many traits o Many traits depend on many genets (multifactorial or polygenetic) and genets have an “quantitative” or “additive” effect where the summation of all creates the trait o Many genes have multiple alleles, as opposed to just 2 (multiple allelic genes) o The expression of many genes depends on certain environmental conditions (epigenetics) Most traits can be altered by environment Still many traits depend heavily on genetics Twin studies and epigenetics Differences between identical twins raised in different environments have greater chances of being “environmental” Differences between fraternal twins raised in identical environments have greater chances of being “genetic” Genetics Disorders (See separate handout)