UNIT 2 – ORGANIC CHEMISTRY - Introducing Organic Compounds o An organic compound is when C atoms are nearly always bonded to each other, to H atoms, and sometimes to atoms of a few specific elements Usually O, N, S, or P Exceptions: carbonates (CO3-2), cyanides (CN-), carbides (C2-2), and oxides of carbon (CO2, CO) o Classified as inorganic compounds o Isomers: Molecules that have the same molecular formula but with their atoms in a different arrangement 2 types Constitutional isomers o Molecules that have the same molecular formula but their atoms are bonded together in a different sequence Also referred to as a structural isomer Ex. 6 C + 14 H can form 5 isomers o 10 C + 22 H can form 25 isomers o 20 C + 42 H can form 366319 isomers Can have ring structures Stereoisomers o Molecules that have the same molecular formula and their atoms are bonded together in the same sequence o Rigidity of the structure of atoms around a double bond help determine the type of isomer o 2 types: Diastereomers Only form when each C atom involved in the double bond has different types of atoms or groups of atoms bonded to it o When two identical atoms/groups are on the same side of the double bond Called cis isomer o When two identical atoms/groups are on the opposite side of the double bond Called trans isomer o Triple bonds do not form diastereomers but can form constitutional isomers Enantiomers Are mirror images of each other around a single C atom o Must have 4 different atoms around the C - Hydrocarbons o Hydrocarbons are organic compounds that contain only C and H atoms Ex. fossil fuels, gasoline, and natural gas o Types: Alkanes Contain only single covalent bonds Are saturated hydrocarbons because does not contain any double or triple bonds o Also saturated because each C is bonded to as many other atoms possible General formula CnH2n+2 o The straight alkane chains can have branches in which 1 C is bonded to more than 2 other carbon atoms The branches are referred to as substituent/side groups All side chain names end in –yl; referred to as alkyl groups Number of C 1 2 3 4 5 6 7 8 9 10 Prefix Number mono di tri tetra penta hexa hepta octa nona deca Root Name methethpropbutpenthexheptoctnondec- Side Chain Name methyl ethyl propyl Butyl pentyl hexyl Naming: o Identify the root Identify longest continuous chain Find the root for the number of C atoms in the chain Start the numbering closest to the side chains because they need to be written with the lowest possible number to get to them o Identify the suffix (-ane) o Identify the prefix It indicates position, number, and type of side group on the main chain Identify the number of C atoms in each side group o Determine the name of each side group If more than 1 type of side group write in alphabetical order Determine position of each side group Before the name of each side group place the number of the C atom to which it is attached on the main chain o Use hyphens to separate to separate number and words, use a coma to separate numbers Use a prefix to identify how many of each type of side chain are present if more than one of the same o i.e. di, tri, etc. Name the compound (# of location)-branch name (parent chain name) Exception: if the side chains have the same numbers no matter the direction (i.e. 4, 5 or 5, 4) the compound must be numbered in the direction that gives the side chain that comes first alphabetically the lowest number o Structural isomers for alkyl groups Models for drawing: o Empirical formula C4H10 o Expanded molecular formula Use brackets to identify location of side chains CH3CH(CH3)CH2CH3 o Structural formula o Condensed Formula o Line Structural Formula Each end counts as a C atom Examples: o Name the following o Draw the following 2, 2 – dimethyl-3-propyloctane 2, 3, 3 – triethylpentane If you have a cyclic hydrocarbon the prefix is cycloo Ex. cyclobutane If a longer chain exists attached to the cyclo structure then the cyclo structure becomes the alkyl group Physical properties o Are non-polar and not soluble in water (recall: like dissolve like) Are soluble in benzene and other non-polar solvents o Small alkanes are usually gases, medium length alkanes are usually liquids, and large alkanes are waxy solids o B.p. increases as straight chain increases Alkenes Have a least 1 double bond in the parent chain All alkenes consist of at least 2 C atoms Can bond to more atoms than are already present due to double bond Since C atoms are not bonded to maximum number of atoms possible they are said to be unsaturated hydrocarbons General formula: CnH2n Naming: o Identify the longest chain that has the double bond o Number the main chain starting closest to the double bond o If the alkene contains 4 or more carbons you must give the position of the double bond by giving the number of the C atom that comes before it (suffix –ene) Ex. but-2-ene o Name the side groups the same Examples: o Name the following o Draw the following 4-ethyl-2,5-dimethyloct-3-ene Physical properties o Are non-polar o The first 3 alkenes are gases (ethane, propene, butane) The larger sizes are liquids o For smaller size in C atoms they have lower b.p. than alkanes Also for same alkene structures but different location of double bonds b.p. changes Alkynes Have at least 1 triple bond Are unsaturated hydrocarbons General formula: CnH2n-2 Naming: o Same rules as alkenes, except suffix is –yne Examples: o Name the following o Draw the following 2,5,6-triethylnon-3-yne Physical properties o Are non-polar o First few alkynes exist as gases o B.p. is larger than alkenes and alkanes Due to linear structure and nature of triple bond causes it to attract 1 another more strongly Takes more energy to overcome these attractive forces Aromatic hydrocarbons Have a low hydrogen to carbon ratio and unusual stability o Due to the presence of multiple bonds All based on the presence of a benzene ring o i.e. C6H6 Aliphatic compounds form chains, not rings The benzene is a resonance hybrid because the double bonds can rotate o The C-C bonds all have the same properties Use a circle in the benzene ring to represent changing double bonds i.e. The electrons in the bond are considered to be delocalized electrons The double bonds are considered to be conjugated double bonds o Very stable because electrons are not readily available A benzene ring as a side chain is called phenyl Naming: o If the benzene ring is the longest chain the root name is benzene Examples: o Name the following o Another way to name aromatic side chains - Physical properties o Benzene properties Benzene is a liquid at room temperature B.p. is similar to aliphatic hydrocarbons that have the same number of C atoms Have a strong odour Hydrocarbon derivatives o Classify compounds according to their functional groups Is a special arrangement of atoms responsible for chemical behaviour of the molecule Hydrocarbon derivatives can form when 1 or more functional groups are attached to a hydrocarbon o Alcohols Contains a hydroxyl functional group; -OH Naming Identify longest chain including hydroxyl group and use the name of the parent alkane as a starting point o Hydroxyl groups need to have lowest number and give number location in the name End in –ol (drop the –e from the alkane, ex. methanol) If more than 1 OH give prefix (di, tri, tetra, etc.) If double or triple bond is present, they take precedence over functional group and OH gets named as a side chain, i.e. hydroxyl Examples: Name the following Draw the following o 2, 3-diethylcycloheaxanol o Physical Properties Hydroxyl group is very polar o However as C chain grows usually becomes non-polar Hydroxyl group also allows the alcohol to hydrogen bond with one another B.p. is higher than alkane Straight chain alcohols fewer than 12 C are liquid Haloalkanes Contains at least 1 halogen atom Naming: Identify longest chain and lowest number of side chains Alphabetical order o Cl, chloro; F, fluoro; Br, bromo; I; iodo Used as a prefix Examples: Name the following Draw the following o 2, 4-dibromo-3-chlorohexane Physical properties Only small haloalkanes are slightly soluble in water i.e. halomethanes b.p. of haloalkanes is much greater than similar size hydrocarbon chains o Aldehydes Contain a carbonyl functional group, Aldehydes contain a formyl group, Always found at the end of the chain Naming: Identify longest chain and stat at the formyl group Name the parent alkane, drop the –e and the suffix now becomes –al; ex. methanal o Also known as formaldehyde When mixed with water it is used to preserve organisms Solution is called formalin Examples: Name the following Draw the following o 2-chloroethanal Physical properties The carbonyl group is very polar Cannot H bond with 1 another but can H bond with water Strength of attraction not as good as alcohols B.p. is lower than alcohol with same number of C atoms Methanal is a gas, ethanal can be a volatile liquid, 15 C chains or longer are waxy solids o 1-4 C chains are soluble, 5-7 C chains are slightly soluble, longer than 7 are insoluble Short chain aldehydes have a very pungent odour When it gets larger it becomes more pleasant o Ketones Acetone is a common ketone, propanone, used in nail polish removal Ketones are an by product of fatty acid metabolism Contains a carbonyl group bonded to 2 C toms Where R is any C atom Smallest ketone must have 3 carbons Naming: Identify the longest chain including carbonyl group Drop the –e from the parent alkane to –one Start numbering closest to carbonyl carbon o Give location of carbonyl carbon in name for carbon chains greater than 4 Examples: Name the following Draw the following o 4, 4-diethylhexane-2, 3-dione o 2-phenyl-5-t-butyldecan-3,4, 6-trione o Physical properties Again carbonyl group is very polar but compounds cannot H bond with one another o Can H bond with water molecules B.p. and solubility is similar to aldehydes Carbon chains 15 and larger are waxy solids, all smaller ketones are liquids Carboxylic Acids Acetic acid which is found in vinegar and citric acid which is found in oranges are examples of carboxylic acids Contains a carboxyl group ( -COOH ) Is a carbonyl group with a hydroxide attached o Ex. methanoic acid (or formic acid) Are weak acids -COOH (aq) ↔ -COO- (aq) + H+(aq) Must always be on the end of the chain Always the starting position Naming Identify the longest chain starting at carboxyl end Drop the –e from the parent alkane and add –oic acid Examples: Name the following o Draw the following o Pentandioic acid Physical properties The C=O and OH are very polar and allows the compound to form H bonds with one another B.p. is higher than any functional group discussed so far Short chains are liquids and longer are waxy Small chains are soluble in water due to the carboxyl group Can conduct electricity because it is a weak acid Esters General formula, RCOOR Give off very distinct aromas, ex. flavoured chewing gum Formed by the combination of a carboxylic acid and an alcohol Naming The root name is taken from the carboxylic acid side o Drop the –oic acid and add -oate The alcohol side is named first like a side chain without a number position Start to count from the carbonyl group Examples Name the following o Draw the following o Ethyl 2 –cyclobutylpropanoate Physical properties The C=O group makes them somewhat polar but with no OH group they can nor form H bonds with one another B.p. is lower than smear alcohols and carboxylic acids Small chains are liquids and large ones are waxy solids Esters with 4 or less C atoms are soluble in water Ethers Was, and in some areas still is used as an anaesthetic Also used as a starter for diesel engines in cold weather, aerosol propellant, solvent, and plasticiser o Helps gasoline to burn cleaner An oxygen atom is single bonded to two carbon atoms, R-O-R’ Naming Identify the longest chain and name like the parent alkane Start numbering close to oxygen atom The shorter chain on the other side of the oxygen is considered an alkoxy group o Drop the –ane from the parent alkane and add –oxy Location is given by C atom from longest chain that touches O atom Smaller chain is named first Examples: Name the following o Draw the following o 2-phenoxyheptane Physical properties The bond angle formed by C-O-C (110◦) makes it slightly polar Cannot form H bonds with one another Ethers with 2 or 3 C atoms are gases, larger are liquids Can form H bonds with water o C atom less than 6 are slightly soluble Amines Are basic molecules that are neutralized by acids into a salt form Can be used as corrosive inhibitors, antioxidants in roofing asphalt, flotation agents in mining Adrenaline is a biological source of amines Contain a N atom bonded to at least 1 C (although it can bond to 3) Primary amines have 1 C, secondary amines have 2 C, tertiary amines have 3 C atoms Naming Identify the longest chain bonded to the N o Start to count close to the N Drop the –e from the parent alkane and add amine Provide location number if necessary For secondary and tertiary amines name as alkyl groups and their location is given by the letter N o Order alphabetically Examples: Name the following Draw the following o Hexan-1, 4-diamine o o N-phenylbutan-1-amine Physical properties The N-H bonds in primary and secondary are very polar o Can H bond with themselves but tertiary cannot Primary and secondary have high b.p. compared to similar ethers and alkanes o Also higher b.p. then tertiary amines All amines can H bond with water o Smaller amines are very soluble in water Amides Found in pain reliever medication and organic solvents used in industry Also found in polymers such as nylon General formula Primary amides have 2 H’s bonded to N, secondary has 1 H, and tertiary has only alkyl groups bonded to the N Are formed by the addition of a carboxylic acid to ammonia (or a primary or secondary amine) i.e. Naming Identify the longest chain that has the carbonyl group o Drop the –e from the parent alkane and add –amide Start the count from the carbonyl group Name the side chains on the N as alkyl groups and give the location using the letter N Examples: Name the following o - Draw the following o N-ethyl-N-propyl-2-methylbutanamide Physical properties Have a polar carbonyl group and primary/secondary amides have at least one –NH group o Can form strong H bonds among themselves Have the largest b.p. than similar hydrocarbons Small amides are very soluble in water Overall polarity from greatest to least Amide > acid > alcohol > ketone ≈ aldehydes > amine > ester > ether > alkane Types of Organic Reactions o Addition reactions Alkenes and alkynes undergo this reaction due to double or triple bonds Small molecule is added to it H2O, H2, HX, or X2 (where X = F, Br, Cl, or I) Forms 1 major product or 2 products that are isomers of each other It is possible to determine the major product of a reaction using Markovnikov’s rule The H atom of the small molecule will attach to the C of the double bond that is already bonded to the most H atoms o o In some reactions we use Pt or Pd as catalysts Elimination reactions Atoms are removed and a double bond forms between 2 C atoms from which the atoms were removed i.e. reverse of addition reaction 1 reactant usually loses 2 atoms and 2 products are formed Heat is usually used as catalyst and sulfuric acid is used for alcohols (H2SO4) o Substitution reactions A H atom or functional group is replaced by a different functional group 2 compounds react to form 2 different compounds Alcohols and haloalkanes commonly undergo substitution reactions o For larger molecules the H atom to be removed will come from the C atom with the most C-C bonds Alkanes can also undergo the reaction in the presence of ultraviolet light by reacting with Cl2 or Br2 Aromatic hydrocarbons can also react with Cl2 and Br2 in the presence of FeBr3 catalyst Condensation reactions A reaction in which 2 large molecules combine and form 1 larger molecule and a very small molecule; usually water Form large biomolecules such as: proteins, carbohydrates, fats, and DNA Recall amino acids are building blocks of proteins o Esterification reactions Special type of condensation reaction in which carboxylic acids react with alcohol to form an ester and water Sulfuric acid is used as a catalyst o Ex. Aspirin and artificial flavours o Hydrolysis reactions Essentially the reverse of a condensation reaction Compounds formed by condensation reactions can be broken down by hydrolysis The OH of the water group is added to 1 side of a bond and the H atom of the water is added to the other side to break the bond o Oxidation reactions A reaction in which a C atom forms more bonds to O or fewer bonds to H Oxidation that involves the formation of C=O bonds may also be classified as an elimination reaction i.e. alcohols can be oxidized to produce aldehydes and ketones Occurs when an organic compound reacts with an oxidizing agent Ex. potassium permanganate KMnO4, acidified potassium dichromate K2Cr2O7, and ozone O3 Symbol [O] is used to symbolize oxidizing agent o Reduction reaction A reaction in which a C atom forms fewer bonds to O and more bonds to H Often C=O or C=C bonds are reduced to a single bond Also considered an addition reaction Aldehydes, ketones, and carboxylic acids can be reduced to becomes alcohols Also alkenes and alkynes by adding H2 Common reducing agents: lithium aluminum hydride LiAlH4, and hydrogen has over platinum catalyst H2/Pt The symbol [H] is used to symbolize reducing agent o - Combustion reaction A hydrocarbon reacts with oxygen to produce the oxides of elements that make up the compound Types: o Complete combustion Produces CO2, water vapour and energy o Incomplete combustion When insufficient O is present Product now has CO and soot Soot is tiny pieces of unburned C Cannot balance Polymers o Long molecule that is made by linking together many smaller molecules called monomers i.e. like a long chain of paper clips linked together Each paper clip is equivalent to a monomer o Can be synthetic or natural o Some can be molded and heated into specific shapes and forms to make plastics Plastics are all synthetic Other examples are adhesives, chewing gum, polystyrene o The name has the prefix poly- before the name of the monomer Common names are sometimes used over the proper name Ex. o Polyethylene where the monomer is ethane Used to make plastic bags, containers, and food wrap o Polyvinyl chloride where the monomer is chloroethene Also called PVC Can be used for adhesives and auto parts o Natural polymers are used to make fabrics such as cotton, linen, and wool o Polymers are found by: Addition polymerization A reaction in which alkene monomers are joined through multiple addition reactions to form a polymer o Characterized by a reduction in number of double bonds o o Condensation polymerization Monomers are combined through multiple condensation reactions o Water is usually produced For the reaction to occur each monomer must have 2 functional groups o Usually 1 at each end Industries usually use petroleum to make polymers Organic reactions are used to convert the hydrocarbons into petrochemicals Natural polymers are found in almost every living system Includes: Polysaccharides o Polymers comprising of sugar monomers Ex. cellulose, starch Proteins o Made up of amino acids DNA o Composed of repeating units called nucleotides Contains a sugar, phosphate group, and a cyclic organic molecule containing N