Proteins Question Booklet Name………………………………….….. Target Grade………………….. Grade achieved………………. __/31 __% Unit 1- Woodford County High School Question 1 Unit 1- Woodford County High School Question 2 Unit 1- Woodford County High School Unit 1- Woodford County High School Question 3 Read through the following passage about protein structure, then write on the dotted lines the most appropriate word or words to complete the passage. All amino acids contain the elements carbon, hydrogen, oxygen and ................................................ The primary structure of a protein is formed when amino acids are joined together by ............................................... bonds. Chains of amino acids may then form a secondary structure such as a spiral shape called the ..............................................., which is maintained by ............................................... bonding. The tertiary structure of a protein is maintained by bonding between the ............................................... of amino acids. (Total 5 marks) Question 4 a) The diagram below shows the structures of two amino acids, alanine and serine. H H N H C O C CH 3 H H N OH H C CH 2 O C OH OH Alanine Serine In the space below, draw a diagram to show a dipeptide formed when these two molecules bond together. (2) Unit 1- Woodford County High School (b) Computer-generated models were used to measure the length in nanometres (nm) of a polypeptide containing a large number of amino acids. Measurements were made of the primary and secondary structure of the polypeptide. The models were used to measure the length of the polypeptide at 25 °C and at 55 °C. The results are shown in the table below. Length of polypeptide/nm Structure of polypeptide at 25 °C at 55 °C Primary 505 505 Secondary 48 70 (i) Explain what is meant by the term secondary structure of a protein. .............................................................................................................. .............................................................................................................. .............................................................................................................. .............................................................................................................. .............................................................................................................. .............................................................................................................. (2) (ii) Compare the results obtained at 25 °C with those obtained at 55 °C. .............................................................................................................. ............................................................................................................ ............................................................................................................ ............................................................................................................. ........................................................................................................... .............................................................................................................. (2) Unit 1- Woodford County High School (iii) Suggest why the increase in temperature has this effect on the length of the secondary structure of the polypeptide. ............................................................................................................. .............................................................................................................. ............................................................................................................. ........................................................................................................... ............................................................................................................. ............................................................................................................. (2) (Total 8 marks) Question 5. (a) Insulin and collagen are both proteins that have a primary structure made up of amino acids joined together by peptide bonds. (i) Explain what is meant by the term primary structure of a protein. ............................................................................................................. .............................................................................................................. .............................................................................................................. .............................................................................................................. (1) (ii) Name the type of reaction that occurs when a peptide bond is broken causing a dipeptide to split into two amino acids. ............................................................................................................. (1) Unit 1- Woodford County High School (b) Insulin and collagen both contain the amino acids glycine and serine. The diagram below shows a dipeptide formed from these two amino acids. Complete the diagram to show the structure of serine when the peptide bond breaks. H H O H H O N—C—C—N—C—C H OH H CH2 OH H H O N—C—C H + OH H Glycine Serine (1) (Total 3 marks) Unit 1- Woodford County High School Mark Scheme Question 1 Question 2 Unit 1- Woodford County High School Question 3 Nitrogen / N; Peptide; {Alpha / α} helix; Hydrogen / H; R groups / side groups / side chains; [5] Question 4 (a) Peptide bond drawn correctly ; Rest of both amino acids drawn correctly ; (b) 2 Reference to α-helix / β-pleated sheet ; (i) Reference to hydrogen bonds ; (ii) 1. 2. 3. 4. (iii) 1. 2. 3. 4. 2 The primary structure is the same length at both temperatures ; The secondary structure is shorter at 25 °C ; Length decreases from primary to secondary at both temperatures ; Correct manipulation of figures ; 2 Reference to increase in kinetic energy at (55 °C) ; (More) vibrations within molecule ; Therefore hydrogen bonds (holding α-helix / β-pleated sheet together) reak/eq; (Molecule) starts to unwind ; 2 [8] Question 5 . (a) (i) the {sequence / order} of amino acids; (ii) hydrolysis; 1 1 (b) H H N H C CH 2 OH O C OH ; 1 [3] Unit 1- Woodford County High School