Biotechnology Course Syllabus Mr. Radsick jradsick@duarte.k12.ca.us Duarte High School Course Description This year long course offers the student an opportunity to experience the basics of microbiology, human genetics, biotechnology, and exploration of bioethical issues. This Biotechnology course includes career exploration, as well as the history and applications of DNA/RNA technology, molecular biology, bioethics, and laboratory safe practices. This course is supplemented with laboratory exercises and demonstrations that illustrate the basic techniques of biotechnology. Specific topics in genomics and bioinformatics will be included. The laboratory component of this course encompasses biochemical and molecular biological techniques that are routinely performed in research, government, and industrial biotechnology laboratories. The exercises are designed to provide a hands-on context for the topics being presented in the course lectures. Finally, the course concludes with a consideration of bioethical issues relating to this powerful new technology. Course Objectives 1. The course will provide demonstrations of the structure and function of DNA, RNA, chromosomes, genes, and proteins. 2. The course will offer a definition of biotechnology, including examples of real-world applications. 3. The course will provide opportunities to apply laboratory techniques with the appropriate lab equipment and materials. 4. The course offers opportunities to discuss and debate selected bioethical issues. Student Competencies or Outcomes The following benchmarks support the objectives of this course. The student should know that... o o The information passed from parents to offspring is coded in DNA molecules. Genes are segments of DNA molecules. Inserting, deleting, or substituting DNA segments can alter genes. An altered gene may be passed on to cells that develop from it. The resulting features may help, harm, or have little or no effect on the offspring's success in its environment. The student should know that... o Risk analysis is used to minimize the likelihood of unwanted side effects of a new technology. The public perception may depend, however, on psychological factors as well as scientific ones. o New varieties of farm plants and animals have been engineered by manipulating their genetic instructions to produce new characteristics. The student should be able to... o Write clear, step-by-step instructions for conducting investigations, operating equipment, lab reports and following a procedure. o Participate in group discussions on scientific topics by restating or summarizing accurately what others have said, asking for clarification or elaborations, and expressing alternative positions. The student should know that... o Biotechnology has contributed to health improvement in many ways, but its cost and application have led to a variety of controversial social and ethical issues. o The development and use of technologies to maintain, prolong, sustain, or terminate life raise social, moral, ethical, and legal issues. This course also supports the National Science Education Standards published by the National Research Council. Outline of Subject Matter 1. 2. 3. 4. 5. 6. 7. 8. 9. The Biotechnology Industry Laboratory Skills Microbiology and Cell Culture DNA Structure and Analysis Bacterial Transformation and Plasmid purification Polymerase Chain Reaction Protein Structure and Analysis Immunological Applications Research Projects Laboratory Activities/Assignments 1. The Biotechnology Industry Career Exploration project in Biotechnology and Industries o o Lab: Egg dissection Lab: Cheese Production 2. Laboratory Skills Rotating station experience to practice making solutions, diluting solutions, measurement, metric system, conversions, sterile technique, pipetting, and micropipetting. o o o o o o Lab: Bleach activity Lab: DNA Extraction and Precipitation Lab: Pipetting Lab: Kool-Aid Chromatography Lab: Making Solutions Lab: Titration 3. Microbiology and Cell Culture Practice making and pouring media and sterile technique. o o o o o Lab: Making Microbiology Media Lab: Disk Diffusion Test (Modified Kirby-Baurer Test) Lab: Microbes and Health (Koch’s Postulate) Lab: Gram Staining Lab: Quantifying Bacterial Numbers 4. DNA Structure and Analysis Models of DNA Project which includes history of discovery, measurement, experiment, collaboration, peer review, scientific process, kinesthetic learning. o o o o o Lab: Restriction Enzyme Analysis Lab: Casting Agarose Gels Lab: Die Electrophoresis Lab: Forensic DNA Fingerprinting Lab: Plasmid Mapping 5. Transformations Time line project/assignment has to include Avery, Griffith, Chargaff, Watson, Crick, Riggs, Franklin, etc. Standing on the shoulders of giants. o o o o Lab: Bacterial Transformation with S3 plasmid Lab: Bacterial Transformation with pGLO plasmid Lab: Purification of S3 and pGLO plasmids Lab: DNA Quantification 6. Polymerase Chain Reaction Collection of DNA large sample in search for ALU element project. Statistical analysis of data to compare to expected values. o o o Lab: STR PCR Analysis Lab: GMO Detection by PCR Lab: Detection of the Human PV92 Alu insertion 7. Protein Structure and Analysis Protein model project using three dimensional models to understand molecular interactions better. o o o o o o Lab: Protein Quantification Using Bradford Assay Lab: Size Exclusion Chromatography Lab: GFP Purification by Hydrophobic Interaction Chromatography Lab: SDS-PAGE of Fish Muscle Lab: Bio-Fuel Enzyme Assay Lab: Exploring Bioinformatics with GFP 8. Immunological Applications City of Hope field trip to see Scientist routine use of Western Blotting. o o Lab: Serum Antibody Detection by ELISA Lab: Bioethics: Quantitative ELISA o Lab: Western Blotting Listing of Instructional Materials Textbook: Biotechnology A Laboratory Skills Course J. Kirk Brown Grade Allocation Tests/Quizzes 50% Laboratory Reports 40% Homework/Classwork 10% o ASSESSMENT: A variety of assessments will be used in this course, but the majority of your grade will be determined by quizzes and tests. Periodic quizzes (vocabulary or reading/content-based) will be given to ascertain student understanding; they may be announced or unannounced. A unit test will be given upon completion of each unit of study. Unit tests may cover one or several chapters in the book and will require considerable time. Questions on quizzes and tests will include material covered during class, in assigned readings and from laboratories. Projects may also be given for various units of study. You may retake a test; however the highest grade afforded is 70 percent. Projects will require that students do the bulk of work out of class. Additionally, since labs are a major part of the Biotechnology course, laboratory reports will be graded. o EVALUATION: Evaluation criteria include participating in and completing classroom activities, working cooperatively in group assignments, correctly answering questions on quizzes/tests, completion of assigned projects, communication laboratory data in a correct and complete manner, and demonstrating proper lab techniques and safety. Note: Grading rubrics will be provided ahead of time for all major projects, essays, and lab reports. o GRADING SYSTEM: Grading is based upon a total points system whereby each assignment is given a number of possible points. Grades are calculated by dividing your total score by the total points possible, which gives a percentage. Students are expected to keep track of their own grades on ed-line. o LATE WORK: YOU ARE RESPONSIBLE FOR TURNING IN ALL ASSIGNMENTS ON TIME AT THE BEGINNING OF CLASS. The highest grade on late work is 70%. However, all assignments need to be current to receive credit on any work past the last assignment. o MAKE UP WORK: According to district policy, students must have the ability to make up any missed work for verified absences. A student is required to bring an excuse to the Attendance Office and is required to make up work immediately upon arrival. If work is not made up then the resulting grade will 70% at best. It is your responsibility to make arrangements to get the work that you miss when you are absent. If you miss a quiz or test, you will be given a different quiz/test than the class. Labs are particularly difficult to make up so, make every effort to attend all classes where we will be conducting a Student Name: ______________________________________________ Student Email: _______________________________________________ Title of Course: ______________________ Class Period:__________ To the Student and Parent(s)/Guardian(s): STUDENT AGREEMENT I, ______________________, have read the syllabus for Biotechnology and agree to abide by the rules and consequences set by Mr. Radsick and Duarte High School. I acknowledge my responsibilities in undertaking such a rigorous and challenging course. I am aware of the Biotechnology testing, grading and make-up / late policies. _______________________________ ______________________________ Student signature Date STUDENT SAFETY CONTRACT I, ______________________, a student in science at Duarte High School, do hereby agree to follow all safety rules and regulations as set forth by the instructor. I realize that compliance with these rules is necessary to assure the safe operation of the school laboratory and provide safe environment not only for myself, but also for my fellow students and teachers as well. I will, therefore, cooperate fully with the teacher and students to assure all of us the safest laboratory possible. I will act responsibly to look for possible safety hazards and will immediately point out these hazards to the instructor. I understand that violation of safety rules may result in the loss of laboratory privileges and possible disciplinary measures. ________________________________ ____________________________ Student Signature Date STUDENT AND PARENT COURSE CONSENT We have read and understand the expectations for Biotechnology and will support Mr. Radsick in his effort to provide an effective learning environment. We also understand that this course is a college level course that will require a significant amount of effort on the part of the student. ____________________________________ Student’s Signature _________________________________________ Parent’s Signature ____________________________________ _________________________________________ Home Phone Number Parent E-mail Phone Number at which parent/guardian can be reached during school hours. Are there any requests that you have of the instructor?