Conference Program
SUNDAY, OCT 18
16:00—20:00 Arrival and Registration
MONDAY, OCT 19 ENCODE Session
07:00--08:00 eakfast
08:00—08:15 pening Remarks
08:10--08:30 Photos
08:30--09:20 Runsheng Chen, The Institute of Biophysics, Chinese Academy ofSciences, China
(Title: )
09:20--09:45 Ross Hardison, The Pennsylvania State University, USA
(Title: )
09:45--10:00 offee break
10:00--10:50 Bing Ren, University of California, San Diego,USA
(Title: )
10:50--11:15
Feng Yue, The Pennsylvania State University, USA
(Title: )
11:15--11:40
Tom Gingeras, Cold Spring Harbor Laboratory-CSHL,USA
(Title: )
11:40--12:05
Lianghu Qu, Sun Yat-sen University,China
(Title: )
Lunch
Jingdong Han,CAS-MPG Partner Institute for Computational Biology, China
(Title: )
Li Yang, CAS-MPG Partner Institute for Computational Biology, China
(Title: )
12:05--13:30
13:30--13:55
13:55--14:20
14:20--14:45
Yijun Ruan, The Jackson Laboratory, USA
(Title: )
14:45--15:00
Coffee Break
15:00--17:30 Encode project workshop，Feng Yue
• Navigate ENCODE data:
– Learn to use resources for viewing, querying, and downloading ENCODE data
• Analyze ENCODE data:
– Learn to use ENCODE web-based and command-line analysis tools
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Run ENCODE processing pipelines on your own data (ChIP-seq, RNA-seq,
DNase-seq, DNA methylation)
Use ENCODE data to:
– Interpret human variation and personal genomes
– Interpret cancer genomes
– Identify likely cell types and pathways underlying non-coding disease
associations
Integrate ENCODE data with those from your lab or major projects (e.g., Roadmap
Epigenomics, IHEC, TCGA, etc.)
18:00--20:00Welcome Diner
Tuesday, OCT 20 Epigenome Session
07:00--08:30 Breakfast
08:30--09:20 John Stamatoyannopoulos, University of Washington,USA
(Title: )
09:20--09:45 Martin Hirst, University of British Columbia, Canada
(Title: )
09:45--10:00
Coffee Break
10:00--10:25 Jiang Liu, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences,
China
(Title: )
10:25--10:50 Ting Wang, Washington University in St. Louis, USA
(Title: )
10:50--11:15 Yong Zhang, Tongji University,China
(Title: )
11:15--11:40 Wenqiang Yu, IBS, Fudan University, China
(Title: )
11:40--12:05 Jason Ernst, University of California, Los Angeles, USA
(Title: )
12:05--13:30
Lunch
13:30--13:55 Hillary Sussman, Genome Research, executive editor, USA
(Title: )
13:55--14:20 Lengming Shi , Fudan University,China
14:20--14:45 Xianping Lu , Chipscreen Biosciences Ltd. ,China
14:45--15:00 Coffee Break
15:00--17:30 Roadmap Epigenome project workshop，Ting Wang
– The NIH Roadmap Epigenomics Project and Engaging current epigenomic
resources
–
Overview of the supplementary website of the Roadmap Epigenomics project
–
Analysis and visualization of hundreds of epigenomes,
– Epigenomic annotation of genetic variants and tutorial of the WashU Epigenome
Browser
18:00--20:00
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