Ch 7: Membrane Structure and Function 2016 Ch 7: Membrane From Topic 1.4 From Topic 1.3 Essential idea: Membranes control the composition of cells by active and Essential idea: The structure of biological membranes makes them passive transport. fluid and dynamic. Nature of science: Experimental design—accurate quantitative Nature of science: measurement in osmosis experiments are essential (3.1). • Using models as representations of the real world—there are Understandings: alternative models of membrane structure (1.11). • Particles move across membranes by simple diffusion, facilitated • Falsification of theories with one theory being superseded by diffusion, osmosis and active transport. another—evidence falsified the Davson-Danielli model (1.9). • The fluidity of membranes allows materials to be taken into cells by Understandings: endocytosis or released by exocytosis. Vesicles move materials within • Phospholipids form bilayers in water due to the amphipathic cells. properties of phospholipid molecules. Applications and skills: • Membrane proteins are diverse in terms of structure, position in the • Application: Tissues or organs to be used in medical procedures must membrane and function. be bathed in a solution with the same osmolarity as the cytoplasm to • Cholesterol is a component of animal cell membranes. prevent osmosis. Applications and skills: • Application: Structure and function of sodium–potassium pumps for active transport and potassium channels for facilitated diffusion in axons. • Application: Cholesterol in mammalian membranes reduces • Skill: Estimation of osmolarity in tissues by bathing samples in membrane fluidity and permeability to some solutes. hypotonic and hypertonic solutions (Practical 2). • Skill: Drawing of the fluid mosaic model. • Skill: Analysis of evidence from electron microscopy that led to the Guidance: • Osmosis experiments are a useful opportunity to stress the need for proposal of the Davson-Daniellimodel. • Skill: Analysis of the falsification of the Davson-Danielli model that led accurate mass and volume measurements in scientific experiments. Utilization: to the Singer-Nicolson model. • Kidney dialysis artificially mimics the function of the human kidney by Guidance: using appropriate membranes and diffusion gradients. • Amphipathic phospholipids have hydrophilic and hydrophobic Aims: properties. • Aim 8: Organ donation raises some interesting ethical issues, including • Drawings of the fluid mosaic model of membrane structure can be the altruistic nature of organ donation and concerns about sale of human two dimensional rather than three dimensional. Individual organs. phospholipid molecules should be shown using the symbol of a circle • Aim 6: Dialysis tubing experiments can act as a model of membrane with two parallel lines attached. A range of membrane proteins should action. Experiments with potato, beetroot or single-celled algae can be be shown including glycoproteins. used to investigate real membranes. Ch 7: Membrane From Topic 6.1 (introduced in HL 1 but covered in HL 2) Understandings: • Different methods of membrane transport are required to absorb different nutrients. From Topic 6.5 Understandings: • Neurons pump sodium and potassium ions across their membranes to generate a resting potential. From Topic 9.1 Understandings: • Active uptake of mineral ions in the roots causes absorption of water by osmosis. From Topic 9.2 Understandings: • High concentrations of solutes in the phloem at the source lead to water uptake by osmosis. • Active transport is used to load organic compounds into phloem sieve tubes at the source. Biological Membranes • Essential idea: The structure of biological membranes makes them fluid and dynamic • Phospholipids form bilayers in water due to the amphipathic properties of phospholipid molecules. • Membrane proteins are diverse in terms of structure, position in the membrane and function. • Amphipathic phospholipids have hydrophilic and hydrophobic properties. • Plasma membrane: a boundary that separates the living cell from it’s nonliving surroundings; made of amphipathic phospholipids and proteins • @ 8 nm thick • Controls chemical traffic • Unique structure based on the different types of phospholipids and proteins found in the PM • Selectively permeable: allows some substance to cross more easily than others Different Models of PM • Using models as representations of the real world—there are alternative models of membrane structure • Skill: Analysis of evidence from electron microscopy that led to the proposal of the Davson-Danielli model. • Skill: Analysis of the falsification of the Davson-Danielli model that led to the Singer-Nicolson model. Membrane proteins are diverse in terms of structure, position in the membrane and function Falsification of theories with one theory being superseded by another— evidence falsified the Davson-Danielli model. • Davson-Danielli Model “Sandwich” Model: In 1935, Hugh Davson and James Danielli suggest that the plasma layer is made of two layers of phospholipids that are each surrounded by a layer of protein Pro’s and Con’s of this model? Different Models of PM Skill: Analysis of the falsification of the Davson-Danielli model that led to the SingerNicolson model. Using models as representations of the real world—there are alternative models of membrane structure Essential idea: The structure of biological membranes makes them fluid and dynamic. • Singer-Nicolson “Fluid Mosaic” Model: In 1972, S.J. Singer and G. Nicolson proposed that the proteins are dispersed and inserted in the phospholipid bilayer with their hydrophilic regions facing the water - This model was supported by freezefracture: http://www.sciencephoto.com/media/530082/view Fluidity of the Plasma Membrane • Essential idea: The structure of biological membranes makes them fluid and dynamic. • Phospholipids form bilayers in water due to the amphipathic properties of phospholipid molecules. • Membrane proteins are diverse in terms of structure, position in the membrane and function. • Amphipathic phospholipids have hydrophilic and hydrophobic properties• The fluidity of membranes allows materials to be taken into cells by endocytosis or released by exocytosis. Vesicles move materials within cells. • The fluidity of PM comes from the movement of the phospholipids and the proteins. • Lipids and proteins can drift laterally switching places, but it rare to switch between phospholipid layers. Fluidity of the Plasma Membrane • Membrane proteins are diverse in terms of structure, position in the membrane and function. • Cholesterol is a component of animal cell membranes. • Application: Cholesterol in mammalian membranes reduces membrane fluidity and permeability to some solutes. • Unsaturated (kink) tails enhance fluidity • More saturated phospholipids makes it easier for it to solidify. • Cholesterol in eukaryotes modulates/stabilizes the fluidity of PM: • Less fluid in warmer temp by restraining phospholipid movement • More fluid in colder temp by preventing close packing of phospholipids. Fluidity of the Plasma Membrane • Phospholipids form bilayers in water due to the amphipathic properties of phospholipid molecules. • The fluidity of membranes allows materials to be taken into cells by endocytosis or released by exocytosis. Vesicles move materials within cells. • Supported by the 1970 HumanMouse Hybrid Experiment. • Labeled with two different fluorescent dyes. • After a couple of hours they were evenly distributed. Human Mouse Hybrids “Mosaic-ness” of the Plasma Membrane Membrane proteins are diverse in terms of structure, position in the membrane and function. • Drawings of the fluid mosaic model of membrane structure can be two dimensional rather than three dimensional. Individual phospholipid molecules should be shown using the symbol of a circle with two parallel lines attached. A range of membrane proteins should be shown including glycoproteins. • • Integral proteins - generally transmembrane Peripheral proteins - not embedded but attached to the membrane surface. - may be attached to integral proteins or held by fibers of ECM (Extra Cellular Matrix). - on cytoplasmic side may be * 2 video set of videos IB Biology Topic 2.4.2 Phospholipid Properties https://www.youtube.com/watch?v=jrxnTgQ DhrU IBguides's channel https://www.youtube.com/watch?v=Q_L3nylg mVY IB Biology Topic 2.4.1 Draw and Label the Plasma Membrane IBguides's channel http://www.susanahalpine.com/an im/Life/memb.htm Function of Membrane Proteins • Membrane proteins are diverse in terms of structure, position in the membrane and function. • Particles move across membranes by simple diffusion, facilitated diffusion, osmosis and active transport. 1) Transport 3) Enzymatic activity 5) Cell-Cell recognition 2) Intercellular joining 4) Signal Transduction 6) Attachment to cytoskeleton Membrane Transport Essential idea: Membranes control the composition of cells by active and passive transport. • Selectively Permeable - Types of membrane proteins: channel, pump, carriers? - Nature of the substance: small/big, hydrophobic/hydrophilic, charged/charged? • Non-polar Molecules - Dissolve in the membrane - Smaller move faster than larger molecules • Polar molecules - small polar, uncharged go right between the phospholipids - Larger molecules need a transport protein - Ions also need transport help. Transport Proteins • Essential idea: Membranes control the composition of cells by active and passive transport. • Transport Proteins: Specific molecules or ions can pass through integral proteins • May have a tunnel ( formed from hydrophilic amino acids) • May bind and physically move it across membrane acting as a carrier (gated/ungated) • Are specific for the substance they transport. Passive Transport • Essential idea: Membranes control the composition of cells by active and passive transport. • Passive Transport: Movement of a substance across a biological membrane. • No energy required. • Driven by the concentration gradient (from high to low) • Rate regulated by permeability and concentration • Example: Diffusion and Osmosis • How do you get the most efficient diffusion? • • Steep gradient Short Distance Diffusion vs. Osmosis • Particles move across membranes by simple diffusion, facilitated diffusion, osmosis and active transport. • Application: Tissues or organs to be used in medical procedures must be bathed in a solution with the same osmolarity as the cytoplasm to prevent osmosis. • Estimation of osmolarity in tissues by bathing samples in hypotonic and hypertonic solutions • Osmosis experiments are a useful opportunity to stress the need for accurate mass and volume measurements in scientific experiments. • Diffusion: the tendency for molecules of any substance to spread out evenly into the available space • Osmosis: the passive transport of water across a membrane (from high to low concentration). • Hypertonic – A solution with a greater concentration of solute. • Hypotonic – A solution with a lower concentration of solute • Isotonic – A solution with an equal amount of solute. Diffusion vs. Osmosis • Nature of science: Experimental design—accurate quantitative measurement in osmosis experiments are essential 100% water 30% solute Hypotonic Hypertonic Diffusion vs. Osmosis • Nature of science: Experimental design—accurate quantitative measurement in osmosis experiments are essential 100% water 30% solute Direction Osmosis Will Occur Direction Diffusion of Solute Will Occur Facilitated Diffusion • Particles move across membranes by simple diffusion, facilitated diffusion, osmosis and active transport. • Facilitated Diffusion: Diffusion across a membrane with the help of transport proteins. • Passive • Helps polar molecules and ions that are slowed down by the membrane lipid’s nature. • They are like enzymes because • have active sites • Max rate can be reached. • Can be inhibited. Active Transport • Active transport is used to load organic compounds into phloem sieve tubes at the source. • Energy is required to go against the concentration gradient (from high to low). • Requires energy • Helps maintain steep gradients, which is necessary for the body to work (ex. Action potentials in neurons) • Transport proteins work with ATP, which provides the necessary energy • Examples: - Sodium Potassium Pumps in Eukaryotes - Proton Pumps in Prokaryotes Sodium Potassium Pump • Structure and function of sodium–potassium pumps for active transport and potassium channels for facilitated diffusion in axon. • Neurons pump sodium and potassium ions across their membranes to generate a resting potential • Three sodium are pumped out for every two potassium pumped in. Each is being pumped against the concentration gradient. • Na/K ATPase: Main electrogenic pump (meaning it creates a voltage across the membrane) in animal cells Proton Pump • Application: Structure and function of sodium–potassium pumps for active transport and potassium channels for facilitated diffusion in axons • Proton pumps: main electrogenic pump in plants, bacteria, and fungi and Chloroplasts, Mitochondria. • By creating a voltage, it stores energy that can be used for cellular work Bulk Transport • The fluidity of membranes allows materials to be taken into cells by endocytosis or released by exocytosis. Vesicles move materials within cells. • Endocytosis: the transport of large molecules inside the cell by forming a vesicle from the plasma membrane • Exocytosis: transport of large molecules out of the cell using a vesicle that has budded off the plasma membrane Different Types of Endocytosis • The fluidity of membranes allows materials to be taken into cells by endocytosis or released by exocytosis. Vesicles move materials within cells. Unused IB Standards • Application: Tissues or organs to be used in medical procedures must be bathed in a solution with the same osmolarity as the cytoplasm to prevent osmosis. • Kidney dialysis artificially mimics the function of the human kidney by using appropriate membranes and diffusion gradients. Aims: • Aim 8: Organ donation raises some interesting ethical issues, including the altruistic nature of organ donation and concerns about sale of human organs. • Aim 6: Dialysis tubing experiments can act as a model of membrane action. Experiments with potato, beetroot or single-celled algae can be used to investigate real membranes. • High concentrations of solutes in the phloem at the source lead to water uptake by osmosis