AfraTafreeh.com Last edited: 8/31/2021 1. CELL CYCLE: INTERPHASE & MITOSIS Cell Biology | Cell Cycle: Interphase & Mitosis Medical Editor: Gerard Jude Loyola OUTLINE I) CELL CYCLE II) INTERPHASE III) MITOSIS IV) MITOSIS MODELS V) WRAPPING UP VI) SUPPLEMENTARY IMAGES VII) APPENDIX VIII) REVIEW QUESTIONS I) CELL CYCLE Figure 1. Overview of the interphase and mitosis. Cell cycle o Interphase and mitosis o Series of phases and steps that a cell goes to replicate itself Turning one cell into two o Also important to control cell growth Cell cycle regulation: proto-oncogenes, tumor suppressor genes, DNA repair enzymes Cell Cycle: Interphase & Mitosis AfraTafreeh.com Cello o Basic unit of all living things o Eukaryotic cells (i.e. human cells) are classified by three different things: 1. Cell membrane o Phospholipid bilayer surrounding the structure 2. Nucleus o Phospholipid bilayer surrounding the structure 3. Cytoplasm CELL BIOLOGY: Note #1. 1 of 9 AfraTafreeh.com II) INTERBASE Figure 2. Overview of interphase. Consists of: o G1 phase o G1/S checkpoint AfraTafreeh.com o S phase o G2 phase (A) G1 PHASE Also called GAP 1 First phase in the cell cycle Duration varies for certain types of cells = months or years in G1 phase depending on the cell G1 prepares the cell for replication and produce an identical cell o Cell that houses the same amount of genetic material (i.e. chromosomes) Recall: Diploid (2n) o Cells containing a total of two sets of chromosomes o In humans, cells have a total of 46 chromosomes 23 paternal chromosomes 23 maternal chromosomes o n = number of chromosomes Figure 3. Replication of diploid cells. (1) Functions Make more organelles o Increase number of organelles (e.g. ribosomes, mitochondria) o Why? Because you need organelles for two cells Synthesize proteins and enzymes o To aid in DNA replication Repair thymine dimers o There are different enzymes that can scan the DNA for thymine dimers (2) Types of Cells Most of our cells stay in G1 phase (i) Labile/Proliferative Cells Cells that are constantly going through the cell cycle Consist of: o Epithelial cells of the skin, GIT and urinary tract o Hematopoietic stem scells in the red bone marrow We have to be constantly making RBC, WBC and platelets (ii) Stable Cells Cells that do NOT go through constant replication Only replicate when there is a strong stimulus (e.g. growth factors) Consist of: o Hepatocytes (liver) Can regenerate even though 40% of the liver is resected Through release of growth factors o Epithelium of the kidney tubules o Alveolar cells of the lungs (iii) Permanent Cells Amitotic cells = cells that do not undergo replication Consist of: o Neurons o Skeletal muscles o Cardiac muscles Thymine dimer o DNA damage caused by exposure to ultraviolet light [Rumora et al, 2008] o Considered to be one of the more ‘bulky and destabilizing’ lesions for several reasons [Rumora et al, 2008] Involves nucleotides locked in a rigid nonstandard shape Causes anomalous migration in gels and it facilitates cyclization by bending DNA Blocks replicative DNA and RNA polymerases 2 of 9 CELL BIOLOGY: Note #1. Cell Cycle: Interphase & Mitosis (B) S PHASE Also called the synthetic phase (1) Function DNA replication o Takes genetic material and open it up → forming a replication bubble → making a new duplicate strand from the single strand in the replication bubble o Semi-conservative model As the cell progresses through G1, it can either delay G1, enter a quiescent state (G0), or proceed past the restriction point [Alberts et al, 2007] o DNA damage is the main indication for a cell to “restrict” and not enter the cell cycle [Alberts et al, 2007] Figure 4. DNA replication showing replication bubble (blue). Semi-conservative replication model o Two original DNA strands separate during replication; each strand serves as a template for a new DNA strand, which means that each newly synthesized double helix is a combination of one original and one new strand [Pray, 2008] (C) G2 PHASE Cell in this phase has 92 chromosomes (4n) with more organelles o However, cell did NOT have enough cytoplasm Duration is about 2 hours (1) Function Cell growth o By increasing the cytoplasm and different components needed to make it bigger and equal for replication Table 1. Summary of interphase. AfraTafreeh.com Interphase Function G1 Phase Make more organelles Synthesize proteins and enzymes Repair thymine dimers Varies according to different cells S Phase DNA replication 6 hours G2 Phase Cell growth (increase cytoplasm) 2 hours Figure 5. Different DNA replication models [Biology LibreTexts] . o DNA replication is maintained by DNA polymerase I and III Can replicate DNA quickly and faithfully o Replicates from 2n to 4n From 46 chromosomes to 92 chromosomes o Constant in duration (~6 hours) (2) G1/S Checkpoint Makes sure that the replication has no issues; there is enough proteins and organelles Cell Cycle: Interphase & Mitosis Duration CELL BIOLOGY: Note #1. 3 of 9 AfraTafreeh.com III) MITOSIS Also called the M phase Duration: 1 hour Consists of four parts: o Prophase o Metaphase o Anaphase o Telophase Cytokinesis Figure 6. Overview of mitosis. Mnemonic: PMAT Prophase Metaphase Anaphase Telophase (A) PROPHASE First phase of mitosis (1) Functions Condensation of chromatin o Since the nucleus has a lot of loose DNA (euchromatin), chromatin should be condensed in order to separate the chromosomes Chromatin = DNA + histone proteins Dissolution of the nuclear envelope o The nuclear envelope needs to be dissolved to separate the chromosomes into the opposite ends o Special types of cyclin dependent kinases (CDK) that phosphorylate different proteins of the nuclear envelope Examples of proteins in the nuclear envelope: lamins, H3A (histone protein) o Phosphorylation → activates proteases → break up the nuclear envelope Formation of the microtubule organization center (MTOC) o Centrioles are markers of MTOC formation [Brinkley, 1985] Can gather during differentiation to become MTOCs AfraTafreeh.com Figure 7. Prophase showing dissolved nuclear envelope, condensed chromosome and MTOCs. 4 of 9 CELL BIOLOGY: Note #1. Cell Cycle: Interphase & Mitosis AfraTafreeh.com AfraTafreeh.com (B) METAPHASE (1) Function Prepares the chromosomes for separation o MTOCs move towards the opposite poles of the cell and connect to chromosomes via the polar microtubules Chromosomes are lined up perfectly in the middle (metaphase plate) (i) Chromosome (C) ANAPHASE (1) Function Separation of sister chromatids o Sister chromatids split away through splitting of the cohesin and are transported to the opposite poles Cohesin: protein that glues the sister chromatids together o Motor proteins can “walk” the chromatids along the microtubules Dynein: (-) end-directed protein Kinesin: (+)-end directed protein AfraTafreeh.com Figure 8. Different parts of the chromosome. Made up of chromatin Parts of the chromosome: o Short arm (top) o Long arm (bottom) o Telomeres Found at the ends of the chromosomes o Centromere Found at the center of the chromosomes Determine the number of chromosomes o Sister chromatids Individual components of the chromosomes o Kinetochore “Hook”-like structure where polar microtubules connect to the chromosome Figure 10. Anaphase showing the splitting of sister chromatids and are transported to the opposite ends by motor proteins (green). Mnemonics: Metaphase = middle = metaphase plate Anaphase = away Figure 9. Metaphase showing a perfectly lined up chromosomes connected by polar microtubules. Cell Cycle: Interphase & Mitosis CELL BIOLOGY: Note #1. 5 of 9 AfraTafreeh.com (D) TELOPHASE Goal: Equal distribution of chromatin, cytoplasm, and organelles into two cells (1) Functions Formation of the cleavage furrow o Actin and myosin Contractile proteins Start contracting the cells producing a constriction ring called cleavage furrow Reformation of the nuclear envelope o Recall that during the prophase, the nuclear envelope dissolved Distribution of chromatin and organelles o Diploid (2n = 46) chromosomes are distributed in each cell Since a nuclear envelope is reformed, chromatin starts becoming loose o Equal amount of organelles (e.g. ribosomes, mitochondria, etc) is distributed Cytokinesis o Equal separation of cytoplasm AfraTafreeh.com Figure 11. Telophase showing equal distribution of chromatin, cytoplasm, and organelles into two cells. Table 2. Summary of the M phase. M Phase Function Prophase Chromatin condenses Nuclear envelope dissolves MTOC forms Metaphase Chromosomes line up perfectly in the middle (metaphase plate) Anaphase Sister chromatids separate into the opposite poles Telophase Cleavage furrow forms Nuclear envelope reforms Chromatin and organelles are evenly distributed Cytokinesis 6 of 9 CELL BIOLOGY: Note #1. Cell Cycle: Interphase & Mitosis IV) MITOSIS MODELS The following images are taken from the Ninja Nerd lecture video: Figure 12. The cell cycle represented in models. AfraTafreeh.com Figure 17. Telomerase showing the formation of the cleavage furrow and cytokinesis. V) WRAPPING UP (A) FATES OF CELLS AFTER THE CELL CYCLE Figure 13. Interphase showing a replicated loose chromatin. Proliferative cells can go through the cell cycle again by entering G1 phase Some cells do not go immediately into the cell cycle and go into the quiescent phase (G0 phase), where cells remain dormant o Stable cells go into the quiescent phase and only go into the cell cycle after a strong stimuli o Permanent cells do not go again into the cell cycle and stay in the G0 phase (B) TELOMERES AND CELL SENESCENCE AfraTafreeh.com Telomeres o Located at the ends of chromosomes Figure 14. Prophase showing a loose chromatin, mitochondrial tubular organization center and dissolution of nuclear envelope. Aging causes shortening of telomeres o Cell senescence Cells are irreversibly out of the cell cycle Figure 18. Aging causes shortening of telomeres. (C) CELL CYCLE CHECKPOINTS Figure 15. Metaphase showing the mitotic spindles on the opposite sides, polar microtubules connecting to the chromosomes, and the metaphase plate. G1/S Checkpoint o Makes sure there are enough organelles and proteins for DNA replication G2/M Checkpoint o Makes sure there are no mistakes in DNA replication o ATM genes Genes that produce proteins which can read the DNA and check for errors M Checkpoint o Checkpoint after metaphase and before anaphase o Makes sure that the chromosomes are aligned perfectly in the metaphase plate o Done by APC proteins, securins Figure 16. Anaphase showing the separation of sister chromatids into the opposite ends. Cell Cycle: Interphase & Mitosis CELL BIOLOGY: Note #1. 7 of 9 VI) SUPPLEMENTARY IMAGES Figure 19. (A) The cell cycle; (B) Length of cell-cycle phases in cultured cells; (C) Time scale of cell-cycle phases [Pollard et al, 2017]. AfraTafreeh.com Figure 20. Cell cycle model [Eisco Labs]. 8 of 9 CELL BIOLOGY: Note #1. Cell Cycle: Interphase & Mitosis AfraTafreeh.com VII) APPENDIX Table 3. Summary of the cell cycle. MITOSIS INTERPHASE Phase G1 Phase Make more organelles Synthesize proteins and enzymes Repair thymine dimers Function Remarks Duration varies according to different cells (labile, stable or permanent) S Phase DNA replication Duration: 6 hours G2 Phase Cell growth (increase cytoplasm) Duration: 2 hours Prophase Chromatin condenses Nuclear envelope dissolves MTOC forms Metaphase Chromosomes line up perfectly in the middle (metaphase plate) Chromosomes are connected to the MTOC via the polar microtubules Metaphase = middle = metaphase plate Anaphase Sister chromatids separate into the opposite poles Anaphase = away Telophase Cleavage furrow forms Nuclear envelope reforms Chromatin and organelles are evenly distributed Cytokinesis VIII) REVIEW QUESTIONS AfraTafreeh.com IX) REFERENCES Which phase does the cell makes more mitochondria? a. G1 b. S c. G2 d. G1 checkpoint Which of the following statements is TRUE? a. The equal distribution of cytoplasm happens during anaphase. b. MTOC is composed of centrioles and centrosomes. c. Stable cells go on continuous cell cycle. d. Chromosomes contain a long arm usually on the top and a short arm on the bottom. ● Rumora, A., Kolodziejczak, K., Wagner, A., & Núñez, A. (2008). Thymine Dimer-Induced Structural Changes to the DNA Duplex Examined with Reactive Probes. Biochemistry, 13026-13035. ● Pray. (2008). Semi-Conservative DNA Replication: Meselson and Stahl. Nature Education, 98. ● Alberts B, J. A. (2007). Molecular Biology of the Cell, 5th ed. New York: Garland Science. ● Brinkley, B. (1985). Microtubule Organizing Centers. Annual Review of Cell Biology, 145-172. ● Pollard, T., Earnshaw, W., Lippincott-Schwartz, J., & Johnson, G. (2017). Cell Biology, 3rd ed. Philadelphia: Elsevier. AfraTafreeh.com Which of the following cells undergo replication when a strong stimulus is detected? a. Hematopoietic cells b. Epithelium of the GIT c. Epithelium of the skin d. Epithelium of kidney tubules How many chromosomes does the G2 phase has? a. 23 b. 46 c. 92 d. 184 Which of the following statements is FALSE? a. Telomeres at the ends of the chromosomes shorten due to aging. b. The permanent cells undergo indefinite stay in the G0 phase. c. The M checkpoint makes sure that the chromosomes are equally distributed. d. During the anaphase, the cohesin splits away and is transported to the opposite side. CHECK YOUR ANSWERS Cell Cycle: Interphase & Mitosis CELL BIOLOGY: Note #1. 9 of 9