Name: Date: Period: Punnett Squares and Genetics I. Intro: To do the following problems you will need to remember the following list of terms. Test your memory of the terms or description in the column on the right with the meaning or example given in the column on the left. Write the number of each answer in the space provided. 1. 2. 3. 4. 5. 6. 7. genotype homozygous dominant homozygous recessive recessive heterozygous (hybrid) phenotype dominant _____ RR _____ gene pair an individual carries, letters _____ physical appearance from gene pairs _____ phenotype always shown when present _____ containing two different forms of a gene _____ rr _____ masked when dominant trait present II. Assigning Symbols: For each of the following problems describe the genotype’s phenotype as given as either homozygous dominant, homozygous recessive, or heterozygous. 8. DD ______________________________ 9. Dd ______________________________ 10. dd ______________________________ 11. ss ______________________________ 12. Yy ______________________________ 13. WW ______________________________ In humans, brown eye color (B), is dominant over blue eye color (b). what are the phenotypes of the following genotypes? 14. BB ______________________________ 15. bb ______________________________ 16. Bb ______________________________ 1 III. Crosses as Predictors: For each of the sets of problems below do the following: a) assign letter symbols b) show the P cross c) draw a Punnett square and plot the gametes from each parent d) list the genotypic ratios of the offspring as a fraction e) list the phenotypic ratios of the offspring as a fraction 17. A heterozygous, smooth pea pod, plant is crossed with a wrinkled pea pod plant. Smooth is dominant over wrinkled. a) c) d) b) e) 18. In humans, acondroplasia “dwarfism” (D) is dominant over normal (d). A homozygous dominant (DD) person dies before the age of one. A heterozygous (Dd) person is dwarfed. A homozygous recessive individual is normal. A heterozygous dwarf man mates with a heterozygous dwarf woman. a) c) d) b) e) 19. In humans, free earlobes (F) is dominant over attached earlobes (f). if one parent is homozygous dominant for free earlobes, while the other has attached earlobes can they produce any children with attached earlobes? 2 20. In humans widow’s peak is dominant over straight hairline. A heterozygous man for this trait has children with a woman who is also heterozygous. Complete the Punnett for possible offspring. a) c) d) b) a) e) 21. In pea plants, axial is dominant over terminal flower position. Cross two hybrid plants. c) d) b) e) Working Backwards: Sometimes we only know about the offspring and we want to learn about the parents. Patterns emerge in Punnett squares. For example, when both parents are heterozygous the phenotypic ratio always comes out 3 to 1. If one parent is homozygous recessive and the other is heterozygous, the phenotypic ratio always comes out 1 to 1. Keeping this in mind see if you can solve the next two problems. 22. In pea plants, yellow seeds are dominant and green seeds are recessive. A pea plant with yellow seeds is crossed with a pea plant with green seeds. The resulting offspring have about equal numbers of yellow and green seeded plants. What are the genotypes of the parents? 3 23. In another cross, a yellow seeded plant was crossed with another yellow seeded plant and it produced offspring of which about 25% were green seeded plants. What are the genotypes of both parents? IV. More Mendel: For the following questions, this cross will be used: Aa x aa A represents axial flowers, a represents terminal flowers. 24. What is the dominant allele? ______________ recessive allele? ______________ 25. What is the phenotype of Aa? ______________ aa? ______________ 26. What fraction of the gametes from Aa will be recessive? ______________ 27. What fraction of the gametes from aa will be recessive? ______________ 28. Create a Punnett square. Write in the gamete possibilities for the Aa parent outside the left side of the square. Write in the gamete possibilities for the aa parents above the top of the square. 29. What fraction of offspring (inside the square) would be homozygous? ______________ 30. What fraction of the offspring would be heterozygous? ______________ 31. What fraction of the offspring would have axial flowers? ______________ 32. What fraction of the offspring would have terminal flowers? ______________ 33. In pea plants, tall is dominant and short is recessive. Cross a heterozygous tall with a heterozygous tall plant. After the cross, list the genotypic and phenotypic ratios predicted. (Remember to assign letters, figure the cross, draw a Punnett) 4 V. A Dog Called Spot (?): Imagine this microscopic drama. A sperm cell from a male dog fuses with an egg cell from a female dog. Each dog’s gamete carries 39 chromosomes. The zygote that results from the fusion of the gametes contains 78 chromosomes – one set of 39 chromosomes from each parent. One pair of the zygote’s chromosomes are shown below. Each chromosome of the homologous pair contains alleles for the same traits. But one chromosome may have a dominant allele and the other a recessive allele. Use the drawings and the table to answer the questions. Trait Hair Length Hair Texture Hair Curliness Coat Pattern Dominant Gene Short (L) Wiry (T) Curly (H) Spotted (A) 34. Will the new puppy have a spotted coat? Explain. 35. Does the female dog have a spotted coat? Explain. 36. Does the male dog have a spotted coat? Explain. 37. What will be the texture of the puppy’s coat? 5 Recessive Gene Long(t) Silky (t) Straight (h) Solid (a) 38. Will the texture of the puppy’s coat resemble that of either of its parents? Explain. 39. Explain why you cannot completely describe the puppy’s parents even though you can accurately describe the puppy. IV. Dihybrid Cross: Two factor crosses involve analyzing two traits at the same time, such as pea pod color and pod shape. Predicting the outcome of two-factor crosses require basically the same procedure as that for crosses involving one trait. Keep in mind that in two-factor crosses the genes controlling the two different traits are located on nonhomologous chromosomes. During meiosis, nonhomologous chromosomes assort independently. This means that each of the chromosomes of any pair of homologous chromosomes has an equal probability of ending up in a gamete with either chromosome from any other pair of homologous chromosomes. The genes that are located on nonhomologous chromosomes also assort independently. Because of independent assortment, a plant that is heterozygous for two traits (genotype example AaBb) will produce equal numbers of four types of gametes – AB, Ab, aB, and ab. What does all that mean!?!? 6 Let’s look at some examples. Two-Trait Punnett square steps: a) assign letter symbols b) show the P cross c) draw a Punnett square and plot the gametes from each parent d) list the phenotypic ratios of the offspring as a fraction (we’re not going to list genotypes for two-traits) We’re crossing two hybrids for two traits, pea pod color and shape. In this species of peas, Yellow is dominant over Green and Round is dominant over Wrinkled. a) Y – yellow y - green R - round r – wrinkled b) RrYy x RrYy c) d) Yellow Round 9/16 Yellow Wrinkled Green Round 3/16 Green Wrinkled 3/16 1/16 I wonder if that ratio means anything, looks kind of familiar… 40. Alleles segregate during: _______________________________________ 41. If RRYY was crossed with rryy: (R = round, r = wrinkled, Y = yellow, y = green) a. What alleles would be in the gametes from parent RRYY? _________________ b. What alleles would be in the gametes from parent rryy? _________________ c. When the two types of gametes fuse, what is the genotype of the offspring? ________ d. What is the phenotype of the offspring? ______________________________________ 7 42. RrYy was crossed with RrYy. a. List the 4 possible gametes from parent RrYy: _________________________________ b. What fraction of their offspring will be: Round & yellow _________________ round & green _________________ Wrinkled & yellow _________________ wrinkled & green __________________ 43. In horses, black coats (B) and walking gaits (W) are dominant to white coats (b) and pacing gaits (w). a. If the male horse is homozygous for both dominant traits, what is his genotype? ______ b. What alleles would be found in the horse’s sperm? _________________ c. The female horse is homozygous for both recessive traits, what is her genotype? _____ d. What alleles are found in the horse’s eggs? _________________ e. Construct a Punnett square chart to show the possible offspring from the mating of these two horse types. 44. Now examine the results of mating two horses from the F1 generation. a. What is the genotype of the male horse? _________________ b. What alleles would be contained in his gametes? ______________________________ c. What is the genotype of the female horse? _________________ d. What alleles would be contained in her gametes? ______________________________ 8 e. Construct a Punnett square chart to show the possible offspring from the mating of these two horse types. f. List the genotypic fractions of the possible offspring in the F2 generation. ___ BBWW ___BbWW ___bbWW ___BBWw ___BbWw ___bbWw ___BBww ___Bbww ___bbww g. List the phenotypic fractions of the possible offspring in the F2 generation. ___ black walkers ___ black pacers ___ white walkers ___ white pacers h. Conclusion: Which horse type(s) would be most likely to occur during the F2 generation? ____________________________________________________________ i. Why would this be helpful to horse breeders? 9 V. Analyzing Inheritance: Offspring resemble their parents by inheriting their genes for characteristics. To learn about inheritance, scientists have experimented with breeding various plants and animals. In each experiment shown in the table, two pea plants with different characteristics were bred. Then, the offspring produced were self-pollinated to produce a second generation of offspring. Consider the data and answer the questions that follow. (Parents = P, First Gen = F1, Second Gen = F2) 45. In the first generation of each experiment, what generalization can you make about the characteristics of the offspring compared to the parents’ characteristics? (tell me more than, “they’re different”) 46. What generalizations can you make about the characteristics of the second generation compared to the characteristics of the first generation? (Were ALL the characteristics shown in the second generation shown in the first generation? Explain why you think this occurred.) 47. Compare the second generation characteristics to the parents’ characteristics. 48. How would you explain why the second generation could express all the characteristics of the parents even though the first generation did not. 10 VI. Trihybrid Cross: Use the following information on fruit flies to complete a trihybrid cross. 49. A = wings, a = wingless, E = red eyes, e = white eyes, H = hairy body, h = hairless P1 fruitflies are heterozygous for wings, red eyes, and hairy bodies. a. What are the genotypes of the P generation? _________________________________ X _________________________________ b. List the possible gametes for both parents. Female: _________________________________ Male: _________________________________ c. Plot the possible gametes in the Punnett square below. Keep like alleles together or it will get confusing…write small so genotypes of possible offspring for in each square. d. What are the possible phenotypes of the offspring? 11 VII. Gregor Mendel was an Austrian monk who studied genetics during the mid 1800’s. His experiments with pea plants laid foundations for modern genetics and gained him the title “Father of Genetics”. The traits Mendel examined in pea plants included: seed shape, seed color, seed coat color, pod shape, pod color, flower position, and plant height. Each trait is controlled by a gene. In these pea plant characteristics, each trait had two different variations, or alleles. For example, genes on a chromosome contain the instructions for plant height. Height is the trait. The alleles for height are short or tall. Specific symbolism is used in genetics. A dominant allele, an allele always expressed in a trait when present, is represented by a capital letter. For height, the dominant allele is represented by “T”. A recessive allele, an allele only expressed in a trait when the dominant allele is not present, is represented by the lower case letter of the dominant trait. For height, the recessive allele is represented by “t”. For example, a plant with genotype Tt will have a phenotype of tall, a plant with genotype tt will have a short phenotype, and a plant with genotype TT will have a tall phenotype. If you noticed, a genotype is the genetic make-up of a trait represented by letters while the phenotype is the physical appearance of that trait. Below is a table showing the traits Mendel observed (with dominant trait listed on top of picture). Complete the following chart of the traits Mendel studied knowing the rules of genetic symbolism. (Remember, dominant allele receives capital letter describing that trait while the recessive allele receives lower case of same letter. In table above, dominant traits are listed above the recessive traits.) Seed Shape Seed Color Seed Coat Pod Shape Dominant Recessive 50. Define Dominant, Recessive, and Allele. 51. Define Genotype and Phenotype. 12 Pod Color Flower placement Plant Height 52. Give an example of a trait. Also, list the two alleles for that trait, label which trait is dominant and which trait is recessive. VIII. NonMendelian Genetics: Incomplete, Codominant, Multiple Allele, and X-Linked Traits will be discussed in the following section. Remember, the “rules” for these types of crosses are slightly different than those of traditional Mendelian genetics. Incomplete Dominance: Remember during incomplete dominance there is no dominant allele and the heterozygous condition makes a third different phenotype. When completing the questions below assign letters to genotypes ensuring the third phenotype (intermediate) is a heterozygous genotype. Use the same 5 steps from Mendelian genetics to complete the crosses below. 53. Spongebob breeds his red jellyfish with Patrick's blue jellyfish. The resulting 7 baby jellies are purple. a. If two of the purple jellyfish bred, what would be the predicted genotypes and phenotypes of those jellies? b. If one purple jellyfish and one red jellyfish bred, what would be the phenotypes of the offspring? c. Is it possible to produce more red jellyfish is you cross bred a blue jelly and a purple jelly? Use a Punnett square to show your answer. 13 54. When red Japanese 4 o’clock flowers are crossed with white flowers they produce offspring that are pink. a. What color of flowers would you get if you crossed two pink flowers? b. What color flowers would you get if you crossed a red with a pink flower? c. What type of flowers could you cross to obtain white flowers? 55. Andalusian fowl (a type of chicken) either have black, white or blue feathers. a. If a blue feathered rooster is crossed with a black feathered hen what will the baby chicks look like? b. How could you tell from the description of the chicken this problem was incomplete dominance? 14 Codominance: Remember during codominance both conditions are expressed in a third phenotype. When completing the questions below assign letters to genotypes ensuring the third phenotype (intermediate) is a heterozygous genotype. 56. Mario and Luigi are growing some mushrooms. Mario has a red mushroom and Luigi has a white mushroom. They breed their mushrooms to produce a mushroom with red and white spots. Now, show the phenotypes if you bred a red and white spotted mushroom with a solid white mushroom. a. Is it possible to get a red and white spotted mushroom by breeding 2 white mushrooms? Show a Punnett square to support your answer. b. What are the possible phenotypes if you bred two red and white spotted mushrooms? c. If Mario wants to raise a patch of mushrooms with both red and white spotted mushrooms and solid red mushrooms, is this patch possible? If so, what are the parent mushrooms’ phenotype? 15 57. In cattle, red coat color is codominant to white color. The intermediate color is called roan (red and white splotches). a. If a roan bull is mated to a white cow, what are the possible genotypes and phenotypes of the offspring? b. Old Man Whithers, a farmer, wants to have a pure herd of roan cattle that breeds true. Is this possible? Why or why not? Multiple Allele: so far we have studied traits or genes that are coded for by just two alleles. However, some traits are coded for by more than two alleles. One of these is blood type in humans. This is a violation of Mendel’s Principle of unit characteristics. In humans, there are four types of blood; A, B, AB, and O. the alleles A and B are codominant to each other and the O allele is recessive to both A and B alleles. So a person with the genotype AA or AO will have A type of blood. See the tables below for other examples. Note the special notation used when assigning allele symbolism to the different blood types. 16 58. What are the possible genotypes that will produce B type blood? _____________________ 59. What is the only genotype that will produce O type blood? __________________________ 60. What is the only genotype that will produce AB type blood? _________________________ 61. Let’s say, you are blood type O and you mate with a person who has AB blood. a. Complete a Punnett square for this cross. b. List the possible blood types of your offspring __________________________________ 17 62. In the 1950’s, a young woman sued film star/director Charlie Chaplin for parental support of her illegitimate child. Charlie Chaplin’s blood type was already on record as type AB. The mother of the child had type A and her son had type O blood. a. Complete a Punnett square for the possible cross of Charlie and the mother. b. The judge ruled in favor of the mother and ordered Charlie to pay child support costs of the child. Was the judge correct in his decision based on bloody typing evidence? Explain. X-Linked Traits: As many of you know boys are different than girls. In human sex is determined by the twenty third pair of chromosomes known as “sex chromosomes.” If you have two x-shaped (XX) chromosomes you are destined to be a female. If you have an x and a Y-shaped (XY) chromosome you are destined to be a male, genetically speaking. Since the X and y chromosomes carry different information, any genes found on the X chromosomes are referred to as X-linked genes (also sometimes referenced as Sex Linked genes). Therefore, women will have two alleles for these genes because they have two (XX) chromosomes. On the other hand, men have only one allele for each of these genes because they have only one X chromosome (XY). This is clearly a violation of Mendel’s Principles of Unit Characteristics, which implies that you receive one set of alleles form each parent. Example: In fruit flies, the gene for eye color is carried on the X chromosome which is a sex chromosome (X-Linked). The allele for red eyes is dominant over the allele for white eyes. If a white eyed female fruit fly is mated with a red eye male, predict the possible offspring. Step 1: Since the female has white eyes, she must be XrXr. The male is red eyed because he has only one X chromosome, he has only one allele for eye color. His eyes are red so he must be X RY. Since the allele R is present on the X chromosome only, and there is no other allele for eye color because the male other sex chromosome is a Y chromosome. Step 2: For X-Linked traits we need to list the genotype in a different fashion. We must identify the individual as being male or female according to their sex chromosomes. Females are XX, and males are XY. X Linked traits are found only on the X chromosome, therefore the letters are placed as superscripts (above) the X chromosome. Therefore the genotype for the female fly is XrXr and the male is XRY. 18 The Punnett square for the parent flies are shown below. The individual XRXr will be a female because she has two X chromosomes. She will have red eyes because she has at least one dominant allele. The individual X rY will be a male because he has the X and Y chromosomes. He will have white eyes because he has only one allele and it is recessive. So from this cross you would expect all of the females to have red eyes and all of the males to have white eyes. 63. Hemophilia is an X-Linked trait. A person with hemophilia is lacking certain proteins that are necessary for normal blood clotting. Hemophilia is caused by a recessive allele so use “N” for normal and “n” for hemophilia. Since hemophilia is X linked, remember a woman will have two alleles (NN or Nn or nn) but a man will have only one allele (N or n). a woman who is heterozygous (a carrier) for hemophilia mates with a normal man. a. What are the genotypes of the parents? b. Make a Punnett square for the above cross. c. What is the probability that a male offspring will have hemophilia? _____________ d. What is the probability of having a hemophiliac female? ______________________ 19 64. Can a color blind female have a son that has normal vision? Color blindness is caused by an X-Linked recessive allele. Explain your answer. 65. Baldness is an X-Linked trait. What parental genotypes could produce a bald woman? Explain your answer. 66. In cats, the gene for calico cats is codominant. Females that receive a B and an R gene have black and orange splotches on white coats. Males can only be black or orange, but never calico. A calico female’s genotype: XBXR. a. Show the cross of a female calico cat with a black male. b. What is the probability the kittens will be black male? ________________________ c. What is the probability the kittens will be calico male? ________________________ d. What is the probability the kittens will be calico female? ______________________ e. Show the cross of a female black cat, with a male orange cat. f. What is the probability the kittens will be calico female? ______________________ g. Describe the color of the male kittens. 20