3.4 Inheritance Essential idea: The inheritance of genes follows patterns. The patterns that genes and the phenotypes they generate can be mapped using pedigree charts. The image show a small section of a pedigree chart that maps the inheritance of hair colour in an extended family over several generations. Analysis of pedigree charts enables us to the nature of the inheritance; controlled by dominant or recessive alleles? linked to the sex chromosomes? controlled by multiple genes or a single gene? By Chris Paine http://www.bioknowledgy.info/ http://www.indiana.edu/~oso/lessons/Genetics/RealColors.html Understandings Statement 3.4.U1 3.4.U2 3.4.U3 3.4.U4 3.4.U5 3.4.U6 3.4.U7 3.4.U8 3.4.U9 Guidance Mendel discovered the principles of inheritance with experiments in which large numbers of pea plants were crossed. Gametes are haploid so contain only one allele of each gene. The two alleles of each gene separate into different haploid daughter nuclei during meiosis. Fusion of gametes results in diploid zygotes with two alleles of each gene that may be the same allele or different alleles. Dominant alleles mask the effects of recessive alleles but co-dominant alleles have joint effects. Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Some genetic diseases are sex-linked. The pattern of Alleles carried on X chromosomes should be inheritance is different with sex-linked genes due to shown as superscript letters on an upper case X, their location on sex chromosomes. such as Xh. Many genetic diseases have been identified in humans but most are very rare. Radiation and mutagenic chemicals increase the mutation rate and can cause genetic diseases and cancer. Applications and Skills Statement Guidance 3.4.A1 Inheritance of ABO blood groups. The expected notation for ABO blood group alleles: O = i, A=IA, B = IB. 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Inheritance of cystic fibrosis and Huntington’s disease. Consequences of radiation after nuclear bombing of Hiroshima and accident at Chernobyl. Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Comparison of predicted and actual outcomes of genetic crosses using real data. Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. 3.4.A3 3.4.A4 3.4.S1 3.4.S2 3.4.S3 3.4.U1 Mendel discovered the principles of inheritance with experiments in which large numbers of pea plants were crossed. Mendel’s principles of inheritance Johann Gregor Mendel (1822-1884) Learn about Mendel and his work by using the weblinks Gregor Mendel: Great Minds by SciShow Because of his work with pea plants Mendel is considered the father of modern genetics. https://youtu.be/GTiOETaZg4w?list=PLC31B0C382 F9585D6 Gregor Mendel and pea plants https://www.dnalc.org/view/16002-GregorMendel-and-pea-plants.html He planted 1000s of seeds per trial and carried out many trials to be sure of his results. Biologica: Mendel’s Peas His published work (1865) is now considered important, but at the time was ignored for 30 years. http://biologica.concord.org/webtest1/ web_labs_mendels_peas.htm https://upload.wikimedia.org/wikipedia/commons/3/3d/Gregor_Mendel_oval.jpg Nature of science: Making quantitative measurements with replicates to ensure reliability. Mendel’s genetic crosses with pea plants generated numerical data. (3.2) To use statistical tests correctly and reach valid conclusions samples of quantitative data has to be sufficiently large First to develop theory scientists must make deductions and test hypotheses: both processes rely on quantitative data. Secondly It is not enough to just have numerical data, the sample size must be sufficiently large to be judged reliable. In smaller samples anomalous values are more likely to skew the calculated mean and standard deviation *The standard deviation of the population is constant: (small) samples have a higher standard deviation than the population the sample comes from. Larger samples give smaller standard deviation*, this in turn makes it easier to find a statistically significant result at a higher confidence level The sample size required varies: • The larger the natural variation the larger the sample • Depends on the type of statistical test used http://www.conceptstew.co.uk/PAGES/nsamplesize.html Nature of science: Making quantitative measurements with replicates to ensure reliability. Mendel’s genetic crosses with pea plants generated numerical data. (3.2) To use statistical tests correctly and reach valid conclusions samples of quantitative data has to be sufficiently large First to develop theory scientists must make deductions and test hypotheses: both processes rely on quantitative data. Secondly It is not enough to just have numerical data, the sample size must be sufficiently large to be judged reliable. In smaller samples anomalous values are more likely to skew the calculated mean and standard deviation *The standard deviation of the population is not affected, remember that (small) samples have a higher standard deviation than the population the sample comes from. Larger samples give smaller standard deviation*, this in turn makes it easier to find a statistically significant result at a higher confidence level The sample size required depends on: • The larger the natural variation the larger the sample • Type of statistical test used http://www.conceptstew.co.uk/PAGES/nsamplesize.html Definitions This image shows a pair of homologous chromosomes. Name and annotate the labeled features. Definitions Genotype The combination of alleles of a gene carried by an organism Phenotype The expression of alleles of a gene carried by an organism Centromere This image shows a pair of homologous chromosomes. Name and annotate the labeled features. Homozygous dominant Having two copies of the same dominant allele Homozygous recessive Having two copies of the same recessive allele. Recessive alleles are only expressed when homozygous. Joins chromatids in cell division Codominant Alleles Different versions of a gene Dominant alleles = capital letter Recessive alleles = lower-case letter Carrier Heterozygous carrier of a recessive disease-causing allele Pairs of alleles which are both expressed when present. Heterozygous Having two different alleles. The dominant allele is expressed. Gene loci Specific positions of genes on a chromosome Review: 3.3.U2 The halving of the chromosome number allows a sexual life cycle with fusion of gametes. Many eukaryotes reproduce by sexual reproduction. Even organisms capable of asexual reproduction will reproduce sexually as well. Sexual reproduction involves fertilisation, the fusion of gametes (sex cells), one from each parent. Because fertilisation involves the fusion of gametes the number of chromosomes in the next generation is doubled. To prevent a doubling of chromosomes in each generation a halving mechanism is needed during the life cycle. To compensate for the chromosome doubling during fertilisation gametes undergo meiosis, which halves the chromosomes present in gametes compared to the parent. http://www.biologycorner.com/resources/diploid_life_cycle.gif 3.4.U3 The two alleles of each gene separate into different haploid daughter nuclei during meiosis. AND 3.4.U2 Gametes are haploid so contain only one allele of each gene. AND 3.4.U4 Fusion of gametes results in diploid zygotes with two alleles of each gene that may be the same allele or different alleles. Because fertilisation involves the fusion of gametes the number of chromosomes is doubled. The diploid organism also now contains two alleles for each gene locus. The alleles present at a gene locus maybe similar or different. Meiosis, along with halving the chromosomes present in gametes also reduces the number of alleles of each gene locus from two to one. http://www.biologycorner.com/resources/diploid_life_cycle.gif 3.4.A1 Inheritance of ABO blood groups. The ABO blood type classification system uses the presence or absence of certain antigen on red blood cells to categorize blood into four types. Distinct molecules called agglutinogens (a type of antigen) are attached to the surface of red blood cells. There are two different types of agglutinogens, type "A" and type "B”. http://www.ib.bioninja.com.au/_Media/abo_blood_groups_med.jpeg http://www.anatomybox.com/tag/erythrocytes/ 3.4.A1 Inheritance of ABO blood groups. More about blood typing A Nobel breakthrough in medicine. Antibodies (immunoglobulins) are specific to antigens. The immune system recognises 'foreign' antigens and produces antibodies in response - so if you are given the wrong blood type your body might react fatally as the antibodies cause the blood to clot. Blood type O is known as the universal donor, as it has no antigens against which the recipient immune system can react. Type AB is the universal recipient, as the blood has no antibodies which will react to AB antigens. Blood typing game from Nobel.org: http://nobelprize.org/educational/medicine/landsteiner/readmore.html Images and more information from: http://learn.genetics.utah.edu/content/begin/traits/blood/ 3.4.A1 Inheritance of ABO blood groups. The ABO blood type is controlled by a single gene, the ABO gene. This gene has three different alleles: i O allele (no anitgen is produced) IA A allele (type “A” anitgen is produced) IB B allele (type “B” anitgen is produced) A I Allele variant Gene (lower case for ‘recessive’ alleles) Diploid cells possess two alleles therefore the possible genotype and phenotype combinations are: Genotype (allele combination) Antigen production Phenotype (characteristic expressed) ii No antigen produced Blood type O IAIA and IAi Type “A” anitgen produced Blood type A IBIB and IBi Type “B” anitgen produced Blood type B IAIB Both type “A” and “B” anitgens produced Blood type AB http://www.anatomybox.com/tag/erythrocytes/ 3.4.U5 Dominant alleles mask the effects of recessive alleles but co-dominant alleles have joint effects. Type “A” allele present and blood type is A therefore the type “A” allele is dominant to type “O” Dominant alleles have the same effect on the phenotype whether it is present in the homozygous or heterozygous state A I i Recessive alleles only have an effect on the phenotype when present in the homozygous state Codominant alleles are pairs of different alleles that both affect the phenotype when present in a heterozygote Type “O” allele present and blood type is not O therefore the type “O” allele is recessive to type “A” A B I I Type “A” and “B” alleles are present and blood type is AB therefore type “A”and “B” alleles are codominant http://www.anatomybox.com/tag/erythrocytes/ 3.4.U5 Dominant alleles mask the effects of recessive alleles but co-dominant alleles have joint effects. Type “A” allele present and blood type is A therefore the type “A” allele is dominant to type “O” Dominant alleles have the same effect on the phenotype whether it is present in the homozygous or heterozygous state A I i Recessive alleles only have an effect on the phenotype when present in the homozygous state Codominant alleles are pairs of different alleles that both affect the phenotype when present in a heterozygote Type “O” allele present and blood type is not O therefore the type “O” allele is recessive to type “A” A B I I Type “A” and “B” alleles are present and blood type is AB therefore type “A”and “B” alleles are codominant http://www.anatomybox.com/tag/erythrocytes/ 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Explain this Mendel crossed some yellow peas with some yellow peas. Most offspring were yellow but some were green! Mendel from: http://history.nih.gov/exhibits/nirenberg/popup_htm/01_mendel.htm 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Segregation The yellow parent peas must be heterozygous. The yellow phenotype is expressed. Through meiosis and fertilisation, some offspring peas are homozygous recessive – they express a green colour. “alleles of each gene separate into different gametes when the individual produces gametes” Mendel did not know about DNA, chromosomes or meiosis. Through his experiments he did work out that ‘heritable factors’ (genes) were passed on and that these could have different versions (alleles). Mendel from: http://history.nih.gov/exhibits/nirenberg/popup_htm/01_mendel.htm 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Segregation “alleles of each gene separate into different gametes when the individual produces gametes” F0 F1 Key to alleles: Y = yellow y = green Genotype: Yy Yy Gametes: Y or y Y or y Punnet Grid: gametes Genotypes: Phenotypes: Phenotype ratio: Alleles segregate during meiosis (anaphase I) and end up in different haploid gametes. Simplified notation of using upper case for dominant and lower case for recessive is acceptable in the case of two alleles without co-dominance. Mendel from: http://history.nih.gov/exhibits/nirenberg/popup_htm/01_mendel.htm 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross Crossing a single trait. F0 Key to alleles: Y = yellow y = green Genotype: Yy Yy Gametes: Y or y Y or y Punnet Grid: gametes Alleles segregate during meiosis (anaphase I) and end up in different haploid gametes. Fertilisation results in diploid zygotes. A punnet grid can be used to deduce the potential outcomes of the cross and to calculate the expected ratio of phenotypes in the next generation (F1). F1 Genotypes: Phenotypes: Phenotype ratio: Mendel from: http://history.nih.gov/exhibits/nirenberg/popup_htm/01_mendel.htm 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross Crossing a single trait. F0 Genotype: Yy Yy Gametes: Y or y Y or y Punnet Grid: F1 Key to alleles: Y = yellow y = green gametes Y y Y YY Yy y Yy yy Alleles segregate during meiosis (anaphase I) and end up in different haploid gametes. Fertilisation results in diploid zygotes. A punnet grid can be used to deduce the potential outcomes of the cross and to calculate the expected ratio of phenotypes in the next generation (F1). Genotypes: Phenotypes: Phenotype ratio: Mendel from: http://history.nih.gov/exhibits/nirenberg/popup_htm/01_mendel.htm 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross Crossing a single trait. F0 Genotype: Yy Yy Gametes: Y or y Y or y Punnet Grid: F1 Key to alleles: Y = yellow y = green gametes Genotypes: Y YY Yy y Yy yy YY Yy Fertilisation results in diploid zygotes. y Y Yy Alleles segregate during meiosis (anaphase I) and end up in different haploid gametes. A punnet grid can be used to deduce the potential outcomes of the cross and to calculate the expected ratio of phenotypes in the next generation (F1). yy Ratios are written in the simplest mathematical form. Phenotypes: Phenotype ratio: 3:1 Mendel from: http://history.nih.gov/exhibits/nirenberg/popup_htm/01_mendel.htm 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross F0 What is the expected ratio of phenotypes in this monohybrid cross? Key to alleles: Y = yellow y = green Phenotype: Genotype: Homozygous recessive Punnet Grid: F1 gametes Genotypes: Phenotypes: Phenotype ratio: Homozygous recessive 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross F0 Phenotype: Genotype: yy yy Homozygous recessive Punnet Grid: F1 What is the expected ratio of phenotypes in this monohybrid cross? Homozygous recessive gametes y y y yy yy y yy yy Genotypes: yy yy yy Phenotypes: Phenotype ratio: All green yy Key to alleles: Y = yellow y = green 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross F0 What is the expected ratio of phenotypes in this monohybrid cross? Key to alleles: Y = yellow y = green Phenotype: Genotype: Homozygous recessive Punnet Grid: F1 gametes Genotypes: Phenotypes: Phenotype ratio: Heterozygous 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross F0 What is the expected ratio of phenotypes in this monohybrid cross? Phenotype: Genotype: yy Yy Homozygous recessive Punnet Grid: F1 Heterozygous gametes Y y y Yy yy y Yy yy Genotypes: Yy Yy Phenotypes: Phenotype ratio: 1:1 yy yy Key to alleles: Y = yellow y = green 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross F0 What is the expected ratio of phenotypes in this monohybrid cross? Key to alleles: Y = yellow y = green Phenotype: Genotype: Homozygous dominant Punnet Grid: F1 Genotypes: Phenotypes: Phenotype ratio: gametes Heterozygous 3.4.S1 Construction of Punnett grids for predicting the outcomes of monohybrid genetic crosses. Monohybrid Cross F0 What is the expected ratio of phenotypes in this monohybrid cross? Phenotype: Genotype: YY Yy Homozygous dominant Punnet Grid: F1 Heterozygous gametes Y y Y YY Yy Y YY Yy Genotypes: YY YY Yy Phenotypes: Phenotype ratio: All yellow Yy Key to alleles: Y = yellow y = green 3.4.S2 Comparison of predicted and actual outcomes of genetic crosses using real data. Cat genetics – collecting real world data Do the inherited traits match what we know about cat genes? http://www.g3journal.org/content/4/10/1881/F4.large.jpg 3.4.S2 Comparison of predicted and actual outcomes of genetic crosses using real data. Cat genetics – collecting real world data Locus Phenotype and genotypes guide Cats surveyed 1 1. Sex 2 … 12 Male (XY) / Female (XX) record genotype 2. Hair length short (ll) / long (LL, Ll) record phenotype 3. Dominant white completely white (WW, Ww) / some colour (ww) record phenotype - stop here if white is recorded 4. Piebald No white (ss) / Some White (Ss) / Mostly White (SS) record genotype, some is < 50%, more is > 50% 5. Pigment density dense - black, brown or orange (DD, Dd) / diffuse - gray, light brown or cream (dd) record phenotype 5. Orange orange or cream (XOXO, XOY) / orange and black or cream and grey (XOXo) / black or grey (XoXo, XoY) record genotype appropriate for the sex Cat images: https://www.petfinder.com/ Source: http://udel.edu/~mcdonald/mythintro.html 3.4.S2 Comparison of predicted and actual outcomes of genetic crosses using real data. Cat genetics – collecting real world data 1. Use the slide (previously) or first hand data collected from a family of cats 2. Survey the cats by completing the table (on the prior slide) – make sure you indicate which cats are the parents and which are the offspring It is important you do not create results, if you cannot determine a characteristic learn the box empty or write unknown 3. From the parental background on the genetic traits construct an expected frequency table 4. Test the expected frequencies against those observed using the Chi-Squared test (see the following slides n.b. especially with small sample sizes it is not always the case that observed data will support theory. Outcomes are individual events and independent of the collective probability, but the larger the sample the more likely the general outcome will follow the theoretical expectation. Cat images: https://www.petfinder.com/ Source: http://udel.edu/~mcdonald/mythintro.html 3.4.S2 Comparison of predicted and actual outcomes of genetic crosses using real data. Cat genetics – collecting real world data How well does the piebald frequency in the offspring match the predictions made from our knowledge of the genes? F0 Phenotype: Genotype: Punnet Grid: F1 Genotypes: Phenotypes: Phenotype ratio: Some white No white Ss ss gametes s s S Ss Ss s ss ss Ss Ss Some white 1:1 ss Key to alleles: S = White s = no white Key to genotypes: ss = no white Ss = some white SS = mostly white ss No white Expected ratios 3.4.S2 Comparison of predicted and actual outcomes of genetic crosses using real data. Cat genetics – collecting real world data How well does the piebald frequency in the offspring match the predictions made from our knowledge of the genes? genotype SS (mostly white) Ss (some white) ss (no white) observed 0 df critical values at 5% 1 3.84 2 5.99 3 7.82 4 9.49 5 11.07 expected 0 3 2 1 2 N = number of classes Degrees of freedom (df) = N – 1 =3–1 =2 Chi-squared value = Chi-squared value < critical value therefore we support the hypothesis of piebald coat colour = (0 – 0)2 + (3 – 2)2 + (1 – 2)2 0 2 2 =1 3.4.S2 Comparison of predicted and actual outcomes of genetic crosses using real data. Chi-squared Test and genetics More help and examples using the Chi-squared test: http://www.slideshare.net/gurustip/the-chisquared-test 3.4.S2 Comparison of predicted and actual outcomes of genetic crosses using real data. Test Cross F0 Used to determine the genotype of an unknown individual. The unknown is crossed with a known homozygous recessive. Phenotype: Genotype: R? unknown r r Key to alleles: R = Red flower r = white Homozygous recessive Possible outcomes: F1 Phenotypes: Unknown parent = RR gametes Unknown parent = Rr gametes 3.4.S2 Comparison of predicted and actual outcomes of genetic crosses using real data. Test Cross F0 Used to determine the genotype of an unknown individual. The unknown is crossed with a known homozygous recessive. Key to alleles: R = Red flower r = white Phenotype: R? Genotype: unknown r r Homozygous recessive Possible outcomes: F1 All red Phenotypes: Unknown parent = RR Some white, some red Unknown parent = Rr gametes r r gametes r r R Rr Rr R Rr Rr R Rr Rr r rr rr 3.4.U8 Many genetic diseases have been identified in humans but most are very rare. 3,358 genes with a phenotype-causing mutation (OMIM, March 19, 2015) Estimated total of 20,000-25,000 genes that are expressed as proteins (International Human Genome Sequencing Consortium, 2004). Although it is impossible to give a single value estimate we can say that genetic diseases are very rare. The number of genes present in the human genome along with the fact that most conditions are autosomal recessive: it is unlikely that one parent will have a mutation on a disease related gene, but the probability that both parents have a mutation on the same gene is very small. http://learn.genetics.utah.edu/content/history/geneticrisk/ For example: Phenylketonuria (PKU) is a rare metabolic disorder that can be destructive to the nervous system, causing intellectual disability. About 1 out of every 15,000 babies is born with PKU. (Source: http://learn.genetics.utah.edu/content/disorders/singlegene/pku/) 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Career-related Case Study “According to the US Bureau of Labor Statistics, the graduate of today will change career four to six times in a lifetime. By one estimate, 65 per cent of the jobs that will be available upon college graduation for students now entering high school (that's eight years from now) do not yet exist. Consider the new interdisciplinary field of genetic counselling, which combines biological science with social work and ethics - it was ranked as one of the "top 10" career choices of 2010 because it offered far more openings than could be filled by qualified applicants.” From the Times Higher Education Supplement – “So Last Century” http://www.timeshighereducation.co.uk/story.asp?sectioncode=26&storycode=415941&c=2 Edited from: http://www.slideshare.net/gurustip/theoretical-genetics 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Career-related Case Study “According to the US Bureau of Labor Statistics, the graduate of today will change career four to six times in a lifetime. By one estimate, 65 per cent of the jobs that will be available upon college graduation for students now entering high school (that's eight years from now) do not yet exist. Consider the new interdisciplinary field of genetic counselling, which combines biological science with social work and ethics - it was ranked as one of the "top 10" career choices of 2010 because it offered far more openings than could be filled by qualified applicants.” From the Times Higher Education Supplement – “So Last Century” http://www.timeshighereducation.co.uk/story.asp?sectioncode=26&storycode=415941&c=2 You are a genetic counselor. A couple walk into your clinic and are concerned about their pregnancy. They each have one parent who is affected by cystic fibrosis (CF) and one parent who has no family history. Explain CF and its inheritance to them. Deduce the chance of having a child with CF and how it can be tested and treated. Use the following tools in your explanations: • Pedigree chart • Punnet grid • Diagrams Edited from: http://www.slideshare.net/gurustip/theoretical-genetics 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Cystic Fibrosis (CF) Clinical example. Pedigree charts can be used to trace family histories and deduce genotypes and risk in the case of inherited gene-related disorders. Here is a pedigree chart for this family history. key I female male affected Not Affected II A III B deceased ? Is CF dominant or recessive? How do you know? • • Edited from: http://www.slideshare.net/gurustip/theoretical-genetics 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Cystic Fibrosis (CF) Clinical example. Pedigree charts can be used to trace family histories and deduce genotypes and risk in the case of inherited gene-related disorders. Here is a pedigree chart for this family history. key I female male affected Not Affected II A III B deceased ? Is PKU dominant or recessive? How do you know? • Recessive • Unaffected mother in Gen I has produced affected II A. Mother must have been a carrier. Edited from: http://www.slideshare.net/gurustip/theoretical-genetics 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Cystic Fibrosis (CF) Clinical example. A mutation in the CFTR gene causes secretions (e.g. mucus, sweat and digestive juices) which are usually thin instead become thick. Instead of acting as a lubricant, the secretions block tubes, ducts and passageways, especially in the lungs and pancreas. Despite therapeutic care lung problems in most CF sufferers leads to a early death (life expectancy is between 35 and 50 years). Diagnosis- blood test taken at 6-7 days after birth http://www.flickr.com/photos/ozewiezewozewiezewallakristallix/263 2833781/ https://youtu.be/-a-WHZoTX0E Edited from: http://www.slideshare.net/gurustip/theoretical-genetics 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Cystic Fibrosis (CF) Clinical example. What is the probability of two parents who are both carriers of the recessive allele producing children affected by CF? F0 Phenotype: carrier Genotype: Tt Punnet Grid: gametes carrier Tt T T t F1 Genotypes: Phenotypes: Phenotype ratio: Edited from: http://www.slideshare.net/gurustip/theoretical-genetics t Key to alleles: T = Normal allele t = mutated allele 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Cystic Fibrosis (CF) Clinical example. What is the probability of two parents who are both carriers of the recessive allele producing children affected by CF? F0 F1 Phenotype: carrier Genotype: Tt Punnet Grid: gametes T t T TT Tt t Tt tt Genotypes: Phenotypes: TT carrier Tt Tt Tt Normal Phenotype ratio: Edited from: http://www.slideshare.net/gurustip/theoretical-genetics Key to alleles: T = Normal allele t = mutated allele tt CF 3:1 Therefore 25% chance of a child with CF 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Pedigree Charts Pedigree charts can be used to trace family histories and deduce genotypes and risk in the case of inherited gene-related disorders. Here is a pedigree chart for this family history. Key to alleles: T = Normal allele t = mutated allele Key: female affected Not Affected deceased Looks like Deduce the genotypes of these individuals: A&B Genotype Reason Edited from: http://www.slideshare.net/gurustip/theoretical-genetics C D male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Pedigree Charts Pedigree charts can be used to trace family histories and deduce genotypes and risk in the case of inherited gene-related disorders. Here is a pedigree chart for this family history. Key to alleles: T = Normal allele t = mutated allele Key: female male affected Not Affected deceased Looks like Deduce the genotypes of these individuals: A&B C D Genotype Both Tt tt Tt Reason Trait is recessive, as both are normal, yet have produced an affected child (C) Recessive traits only expressed when homozygous. To have produced affected child H, D must have inherited a recessive allele from either A or B Edited from: http://www.slideshare.net/gurustip/theoretical-genetics 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Pedigree Charts Key to alleles: T = Normal allele t = mutated allele Individuals D and $ are planning to have another child. Calculate the chances of the child having CF. Key: female affected Not Affected $ deceased Looks like Genotypes: D= Gametes Phenotype ratio $= Edited from: http://www.slideshare.net/gurustip/theoretical-genetics Therefore male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Pedigree Charts Key to alleles: T= Has enzyme t = no enzyme Individuals D and $ are planning to have another child. Calculate the chances of the child having CF. Key: female affected $ Not Affected deceased Looks like Genotypes: D = Tt (carrier) $ = tt (affected) T t t Tt tt t Tt tt Gametes Edited from: http://www.slideshare.net/gurustip/theoretical-genetics Phenotype ratio 1 : 1 Normal : CF Therefore 50% chance of a child with CF male Review: 3.1.A1 The causes of sickle cell anemia, including a base substitution mutation, a change to the base sequence of mRNA transcribed from it and a change to the sequence of a polypeptide in hemoglobin. Review: 3.1.A1 The causes of sickle cell anemia, including a base substitution mutation, a change to the base sequence of mRNA transcribed from it and a change to the sequence of a polypeptide in hemoglobin. https://youtu.be/1fN7rOwDyMQ 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Another example of codominance. Remember the notation used: superscripts represent codominant alleles. In codominance, heterozygous individuals have a mixed phenotype. The mixed phenotype gives protection against malaria, but does not exhibit full-blown sickle cell anemia. Complete the table for these individuals: Genotype Description Phenotype Malaria protection? Homozygous HbA Heterozygous Homozygous HbS 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Another example of codominance. Remember the notation used: superscripts represent codominant alleles. In codominance, heterozygous individuals have a mixed phenotype. The mixed phenotype gives protection against malaria, but does not exhibit full-blown sickle cell anemia. Complete the table for these individuals: Genotype HbA HbA HbA HbS HbS HbS Description Homozygous HbA Heterozygous Homozygous HbS Phenotype normal carrier Sickle cell disease Malaria protection? No Yes Yes 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Another example of codominance. Predict the phenotype ratio in this cross: F0 Phenotype: carrier Key to alleles: HbA = Normal Hb HbS = Sickle cell affected Genotype: Punnet Grid: F1 gametes Genotypes: Phenotypes: Phenotype ratio: : Therefore 50% chance of a child with sickle cell disease. 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Key to alleles: HbA = Normal Hb HbS = Sickle cell Another example of codominance. Predict the phenotype ratio in this cross: F0 Phenotype: carrier Genotype: HbA Hbs Punnet Grid: F1 Genotypes: Phenotypes: Phenotype ratio: gametes affected HbS Hbs HbS HbS HbA HbAHbS HbAHbS HbS HbSHbS HbSHbS HbAHbS & HbSHbS Carrier & Sickle cell 1:1 Therefore 50% chance of a child with sickle cell disease. 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Another example of codominance. Predict the phenotype ratio in this cross: F0 Phenotype: carrier Genotype: Punnet Grid: F1 Genotypes: Phenotypes: Phenotype ratio: gametes carrier Key to alleles: HbA = Normal Hb HbS = Sickle cell 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Key to alleles: HbA = Normal Hb HbS = Sickle cell Another example of codominance. Predict the phenotype ratio in this cross: F0 Phenotype: carrier Genotype: HbA HbS Punnet Grid: F1 Genotypes: Phenotypes: Phenotype ratio: gametes carrier HbA HbS HbA HbS HbA HbAHbA HbAHbS HbS HbAHbS HbSHbS HbAHb & 2 HbAHbS & HbSHbS Unaffected & Carrier & Sickle cell 1: 2 : 1 Therefore 25% chance of a child with sickle cell disease. 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Another example of codominance. Predict the phenotype ratio in this cross: F0 Phenotype: carrier Genotype: HbA HbS Punnet Grid: gametes HbA HbS F1 Genotypes: Phenotypes: Phenotype ratio: unknown Key to alleles: HbA = Normal Hb HbS = Sickle cell 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Another example of codominance. Predict the phenotype ratio in this cross: F0 Phenotype: carrier Genotype: HbA HbS Punnet Grid: gametes HbA HbS F1 Genotypes: Phenotypes: Phenotype ratio: Key to alleles: HbA = Normal Hb HbS = Sickle cell unknown HbA HbA or HbA HbS HbA HbA HbA HbS 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. Sickle Cell Another example of codominance. Predict the phenotype ratio in this cross: F0 Phenotype: carrier Genotype: HbA HbS Punnet Grid: F1 Genotypes: Phenotypes: Phenotype ratio: Key to alleles: HbA = Normal Hb HbS = Sickle cell unknown HbA HbA or HbA HbS gametes HbA HbA HbA HbA HbAHbA HbAHbA HbAHbA HbAHbS HbS HbAHbS HbAHbS HbSHbS HbAHbS HbS 3 HbAHbA & 4 HbAHbS & 1 HbSHbS 3 Unaffected & 4 Carrier & 1 Sickle cell 3:4:1 Therefore 12.5% chance of a child with sickle cell disease. 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Huntington's Disease (HD) is a brain disorder that affects a person's ability to think, talk, and move. HD is caused by a mutation in a gene on chromosome 4. Genetics review: 1. Is this a dominant or recessive condition? 2. Is this disorder autosomal or sex-linked 3. Produce a punnett square to explain the inheritance pattern in the diagram. 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Huntington's Disease (HD) is a brain disorder that affects a person's ability to think, talk, and move. HD is caused by a mutation in a gene on chromosome 4. Genetics review: 1. Is this a dominant or recessive condition? Dominant – individuals are affected with only a single mutated allele. 2. Is this disorder autosomal or sex-linked Autosomal – chromosome 4 3. Produce a punnett grid to explain the inheritance pattern in the diagram. [Next slide] http://learn.genetics.utah.edu/content/disorders/singlegene/hunt/ 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Huntington's Disease (HD) Clinical example. What is the probability of an unaffected mother and a heterozygous affected father (for HD) producing children affected by HD? F0 Phenotype: normal Genotype: tt Punnet Grid: gametes affected Tt T t t F1 Genotypes: Phenotypes: Phenotype ratio: Edited from: http://www.slideshare.net/gurustip/theoretical-genetics t Key to alleles: T = mutated allele t = normal gene 3.4.U6 Many genetic diseases in humans are due to recessive alleles of autosomal genes, although some genetic diseases are due to dominant or co-dominant alleles. AND 3.4.A3 Inheritance of cystic fibrosis and Huntington’s disease. Huntington's Disease (HD) Clinical example. What is the probability of an unaffected mother and a heterozygous affected father (for HD) producing children affected by HD? F0 F1 Phenotype: normal affected Genotype: tt Punnet Grid: gametes T t t Tt tt t Tt tt Genotypes: Phenotypes: Phenotype ratio: Tt Tt Tt HD tt tt Normal 1:1 Edited from: http://www.slideshare.net/gurustip/theoretical-genetics Key to alleles: T = mutated allele t = normal gene Therefore 50% chance of a child with HD 3.4.U7 Some genetic diseases are sex-linked. The pattern of inheritance is different with sex-linked genes due to their location on sex chromosomes. Sex Linkage X and Y chromosomes are non-homologous. The sex chromosomes are non-homologous. There are many genes on the X-chromosome which are not present on the Y-chromosome. Non-homologous region Sex-linked traits are those which are carried on the X-chromosome in the non-homologous region. Alleles in this regions are expressed whether they are dominant or recessive, as there is no alternate allele carried on the Y chromosome. Therefore sex-linked genetic disorders are more common in males. Non-homologous region Examples of sex-linked genetic disorders: - haemophilia - colour blindness Edited from: http://www.slideshare.net/gurustip/theoretical-genetics http://www.angleseybonesetters.co.uk/bones_DNA.html http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Sex Linkage X and Y chromosomes are non-homologous. What number do you see? Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Sex Linkage X and Y chromosomes are non-homologous. What number do you see? 5 = normal vision 2 = red/green colour blindness Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Sex Linkage X and Y chromosomes are non-homologous. How is colour-blindness inherited? The red-green gene is carried at locus Xq28. This locus is in the non-homologous region, so there is no corresponding gene (or allele) on the Y chromosome. Normal vision is dominant over colour-blindness. XN XN Normal female Xn Xn XN Xn Affected female Carrier female XN Y Normal male Xn Y Affected male no allele carried, none written Key to alleles: N = normal vision n = red/green colour blindness Xq28 Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome Human females can be homozygous or heterozygous with respect to sex-linked genes. Heterozygous females are carriers. 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Sex Linkage X and Y chromosomes are non-homologous. What chance of a colour-blind child in the cross between a normal male and a carrier mother? F0 Genotype: Phenotype: XN Xn Carrier female X XN Y Key to alleles: N = normal vision n = red/green colour blindness Normal male Punnet Grid: F1 Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Sex Linkage X and Y chromosomes are non-homologous. What chance of a colour-blind child in the cross between a normal male and a carrier mother? F0 Genotype: Phenotype: XN X Carrier female N X Punnet Grid: F1 Xn XN Y Key to alleles: N = normal vision n = red/green colour blindness Normal male Y XN XN XN XN Y Xn XN Xn n X Y Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Sex Linkage X and Y chromosomes are non-homologous. What chance of a colour-blind child in the cross between a normal male and a carrier mother? F0 Genotype: Phenotype: Punnet Grid: F1 N X n X Carrier female X N X Y Key to alleles: N = normal vision n = red/green colour blindness Normal male XN Y N XN N X X XN Y Normal female n X N X n X Carrier female Normal male Xn Y Affected male What ratios would we expect in a cross between: a. a colour-blind male and a homozygous normal female? b. a normal male and a colour-blind female? There is a 1 in 4 (25%) chance of an affected child. Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Red-Green Colour Blindness How does it work? The OPN1MW and OPN1LW genes are found at locus Xq28. They are responsible for producing photoreceptive pigments in the cone cells in the eye. If one of these genes is a mutant, the pigments are not produced properly and the eye cannot distinguish between green (medium) wavelengths and red (long) wavelengths in the visible spectrum. Because the Xq28 gene is in a non-homologous region when compared to the Y chromosome, red-green colour blindness is known as a sexlinked disorder. The male has no allele on the Y chromosome to combat a recessive faulty allele on the X chromosome. Xq28 Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Hemophilia Another sex-linked disorder. Blood clotting is an example of a metabolic pathway – a series of enzyme-controlled biochemical reactions. It requires globular proteins called clotting factors. A recessive X-linked mutation in hemophiliacs results in one of these factors not being produced. Therefore, the clotting response to injury does not work and the patient can bleed to death. XH XH Normal female Xh Xh Affected female XH Xh Carrier female XH Y Normal male Xh Y no allele carried, none written Key to alleles: XH = healthy clotting factors Xh = no clotting factor Affected male Human females can be homozygous or heterozygous with respect to sex-linked genes. Heterozygous females are carriers. Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Hemophilia results from a lack of clotting factors. These are globular proteins, which act as enzymes in the clotting pathway. Read/ research/ review: How can gene transfer be used to treat hemophiliacs? What is the relevance of “the genetic code is universal” in this process? Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.A2 Red-green colour blindness and hemophilia as examples of sex-linked inheritance. Hemophilia results from a lack of clotting factors. These are globular proteins, which act as enzymes in the clotting pathway. Chromosome images from Wikipedia: http://en.wikipedia.org/wiki/Y_chromosome 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Hemophilia Royal Family Pedigree Chart from: http://www.sciencecases.org/hemo/hemo.asp This pedigree chart of the English Royal Family gives us a picture of the inheritance of this X-linked disorder. 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Hemophilia Pedigree chart practice State the genotypes of the following family members: 1. Leopold 2. Alice 3. Bob was killed in a tragic croquet accident before his phenotype was determined. 4. Britney Key: affected Key to alleles: H = healthy clotting factors h = no clotting factor Royal Family Pedigree Chart from: http://www.sciencecases.org/hemo/hemo.asp Not Affected deceased female male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Hemophilia Pedigree chart practice State the genotypes of the following family members: 1. Leopold Xh Y 2. Alice 3. Bob was killed in a tragic croquet accident before his phenotype was determined. 4. Britney Key: affected Key to alleles: H = healthy clotting factors h = no clotting factor Royal Family Pedigree Chart from: http://www.sciencecases.org/hemo/hemo.asp Not Affected deceased female male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Hemophilia Pedigree chart practice State the genotypes of the following family members: 1. Leopold Xh Y 2. Alice XH Xh 3. Bob was killed in a tragic croquet accident before his phenotype was determined. 4. Britney Key: affected Key to alleles: H = healthy clotting factors h = no clotting factor Royal Family Pedigree Chart from: http://www.sciencecases.org/hemo/hemo.asp Not Affected deceased female male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Hemophilia Pedigree chart practice State the genotypes of the following family members: 1. Leopold Xh Y 2. Alice X H Xh 3. Bob was killed in a tragic croquet accident before his phenotype was determined. XH Y or Xh Y 4. Britney Key: affected Key to alleles: H = healthy clotting factors h = no clotting factor Royal Family Pedigree Chart from: http://www.sciencecases.org/hemo/hemo.asp Not Affected deceased female male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Hemophilia Pedigree chart practice State the genotypes of the following family members: 1. Leopold Xh Y 2. Alice XH Xh 3. Bob was killed in a tragic croquet accident before his phenotype was determined. XH Y or Xh Y 4. Britney Key to alleles: H = healthy clotting factors h = no clotting factor XH XH or XH Xh Royal Family Pedigree Chart from: http://www.sciencecases.org/hemo/hemo.asp Key: affected Not Affected deceased female male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Pedigree Chart Practice Key: affected Not Affected deceased Dominant or Recessive? Autosomal or Sex-linked? female male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Pedigree Chart Practice Key: affected Not Affected deceased Dominant or Recessive? Dominant. A and B are both affected but have produced unaffected (D & F). Therefore A and B must have been carrying recessive healthy alleles. If it were recessive, it would need to be homozygous to be expressed in A & B – and then all offspring would be homozygous recessive. Autosomal or Sex-linked? female male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Pedigree Chart Practice Key: female male affected Not Affected deceased Dominant or Recessive? Dominant. Autosomal or Sex-linked? Autosomal. A and B are both affected but have produced unaffected (D & F). Therefore A and B must have been carrying recessive healthy alleles. Male C can only pass on one X chromosome. If it were carried on X, daughter H would be affected by the dominant allele. If it were recessive, it would need to be homozygous to be expressed in A & B – and then all offspring would be homozygous recessive. Tip: Don’t get hung up on the number of individuals with each phenotype – each reproductive event is a matter of chance. Instead focus on possible and impossible genotypes. Draw out the punnet grids if needed. 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Super Evil Past Paper Question In this pedigree chart for hemophilia, what is the chance that offspring ? will be affected? A. 0% B. 12.5% C. 25% D. 50% Key: affected Not Affected deceased female male 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Super Evil Past Paper Question In this pedigree chart for hemophilia, what is the chance that offspring ? will be affected? A. 0% B. 12.5% C. 25% D. 50% Key: affected Not Affected deceased female male Key to alleles: XH = healthy clotting factors Xh = no clotting factor 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Super Evil Past Paper Question In this pedigree chart for hemophilia, what is the chance that offspring ? will be affected? A. 0% B. 12.5% C. 25% Key to alleles: XH = healthy clotting factors Xh = no clotting factor D. 50% Key: female male What do we know? A = XH Y B = XH Xh (because G = Xh Y) E = XH Y affected Not Affected XH deceased Y 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Super Evil Past Paper Question In this pedigree chart for hemophilia, what is the chance that offspring ? will be affected? A. 0% B. 12.5% C. 25% Key to alleles: XH = healthy clotting factors Xh = no clotting factor D. 50% Key: affected Not Affected female male What do we know? A = XH Y B = XH Xh (because G = Xh Y) E = XH Y There is an equal chance of F being XH XH or XH Xh So: XH XH deceased Y XH XH Xh 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Super Evil Past Paper Question In this pedigree chart for hemophilia, what is the chance that offspring ? will be affected? A. 0% B. 12.5% C. 25% Key to alleles: XH = healthy clotting factors Xh = no clotting factor D. 50% Key: affected Not Affected female male What do we know? A = XH Y B = XH Xh (because G = Xh Y) E = XH Y There is an equal chance of F being XH XH or XH Xh So: XH XH XH Xh XH XH XH XH XH XH XH XH Xh Y XH Y XH Y XH Y Xh Y deceased 3.4.S3 Analysis of pedigree charts to deduce the pattern of inheritance of genetic diseases. Super Evil Past Paper Question In this pedigree chart for hemophilia, what is the chance that offspring ? will be affected? A. 0% B. 12.5% C. 25% Key to alleles: XH = healthy clotting factors Xh = no clotting factor D. 50% Key: affected Not Affected female male What do we know? A = XH Y B = XH Xh (because G = Xh Y) E = XH Y There is an equal chance of F being XH XH or XH Xh So: XH XH XH Xh XH XH XH XH XH XH X H XH Xh Y XH Y XH Y XH Y Xh Y deceased So there is a 1 in 8 (12.5%) chance of the offspring being affected! 3.4.U9 Radiation and mutagenic chemicals increase the mutation rate and can cause genetic diseases and cancer. A mutation is a change in an organisms genetic code. A Gene mutation is a change in the nucleotide sequence of a section of DNA coding for a particular feature Mutagens are agents that cause gene mutations such as: • chemicals that cause mutations (like some found in tobacco smoke) are referred to as carcinogens • high energy radiation such as X-rays • ultraviolet light • Some viruses* Alleles of a gene are similar, but have variations in the base sequence. New alleles are created by gene mutation. *Though an important source of mutation it is not a focus of this syllabus point. https://commons.wikimedia.org/wiki/File:Papierosa_1_ubt_0069.jpeg Review: 1.6.U6 Mutagens, oncogenes and metastasis are involved in the development of primary and secondary tumours. If a mutation occurs in an oncogenes it can become cancerous. In normal cells oncogenes control of the cell cycle and cell division. mutation in a oncogene malfunction in the control of the cell cycle uncontrolled cell division tumour formation http://en.wikipedia.org/wiki/Oncogene#mediaviewer/File:Oncogenes_illustration.jpg 3.4.U9 Radiation and mutagenic chemicals increase the mutation rate and can cause genetic diseases and cancer. A mutation is a change in an organisms genetic code. A Gene mutation is a change in the nucleotide sequence of a section of DNA coding for a particular feature Mutations can be classed as being beneficial, neutral (due to the degenerate nature of DNA) or harmful. Most mutations are neutral or harmful. Mutations that occur in body (somatic cells) remain within the organism. Mutations that occur in gametes can be inherited by offspring: this is how genetic diseases arise. http://www.nature.com/scitable/topicpage/rare-genetic-disorders-learning-about-genetic-disease-979 3.4.A4 Consequences of radiation after nuclear bombing of Hiroshima and accident at Chernobyl. accident at Chernobyl nuclear power station Radioactive isotopes released into the environment exposing humans and other organisms to potentially dangerous levels of radiation. nuclear bombing of Hiroshima http://i.telegraph.co.uk/multimedia/archive/02446/hiroshimabomb_2446747b.jpg https://upload.wikimedia.org/wikipedia/commons/1/16/VOA_Mark osian_-_Chernobyl02.jpg 3.4.A4 Consequences of radiation after nuclear bombing of Hiroshima and accident at Chernobyl. nuclear bombing of Hiroshima • Elevated rate of Leukemia (with the greatest impact in children and young adults) • Elevated rates of other cancers • No evidence of stillbirth or mutations in the children of those exposed to radiation https://upload.wikimedia.org/wikipedia/commons/f/f6/Hiroshima_girl.jpg https://upload.wikimedia.org/wikipedia/commons/e/e9/The_patient%27s_skin_is_burned_in_a_pattern_corresponding_to_the_dark_porti ons_of_a_kimono_-_NARA_-_519686.jpg http://i.telegraph.co.uk/multimedia/archive/02446/hiroshima-bomb_2446747b.jpg 3.4.A4 Consequences of radiation after nuclear bombing of Hiroshima and accident at Chernobyl. accident at Chernobyl nuclear power station • A large area of pine forest downwind of the reactor turned brown and died. • Horses and cattle near the plant died from radiation damage to their thyroid glands. • Bioaccumulation of radioactive caesium in fish (Scandinavia and Germany) and lamb (Wales) - contaminated meat was banned from sale for years afterward. • Drinking water (and milk) contaminated with radioactive iodine - at least 6,000 thyroid cancer attributed to radioactive iodine. • No clear evidence to support an increase in the rate of leukemia other cancers – in part due to the widely dispersed variable radiation and measures taken in European populations. https://upload.wikimedia.org/wikipedia/commons/1/16/VOA_Markosian_-_Chernobyl02.jpg http://i.guim.co.uk/img/static/sys-images/Guardian/Pix/pictures/2014/6/27/1403890449199/933cb303-bf75-4e9a-8b0b-806bbfa6a37b2060x1373.jpeg?w=620&q=85&auto=format&sharp=10&s=abe2802021d01fe090859454e9020a44 Whirling Gene activity from the awesome Learn.Genetics site: http://learn.genetics.utah.edu/archive/pedigree/mapgene.html More practise questions for inheritance – the best way to learn genetic theory is by practise. Excellent problems and tutorials by the biology project Sex linked inheritance problems: http://www.biology.arizona.edu/mendelian_genetics/problem_sets/sex_linked_inheritance/sex_linked _inheritance.html Monohybrid inheritance problems: http://www.biology.arizona.edu/mendelian_genetics/problem_sets/monohybrid_cross/monohybrid_cr oss.html Bibliography / Acknowledgments Bob Smullen