WHAT IS A CELL? It is fundamental living unit of any organism. Metabolism refers to all of the chemical reactions that occur within a cell. WHAT ARE THE IMPORTANCE OF METABOLISM? Growth, reproduction, and irritability. Mutation pertains to the accidental changes in the genetical material. Cells are classified as: 1. Prokaryotes Do not have complex system of membranes and organelles. Bacteria and archaea. 2. Eukaryotes More complex cells, containing true nucleus and many membrane bound organelles. Algae, protozoa, fungi, plants, animals, and humans. Microbes 1. Acellular 2. Cellular 2.1. Prokaryotes 2.2. Eukaryotes Eukaryotic Cell Eu meaning true; karyo meaning nucleus Have true nucleus, DNA is enclosed by a nuclear membrane. 10x larger than most prokaryotic cells. Eukaryotic Cell Structures 1. Cell Membrane Enclosed and keep the cell intact. Composed of large molecules of proteins and phospholipids. Selective permeability. 2. Nucleus Controls the functions of the entire cell. “Command center” 4 components: nucleoplasm; nuclear membrane; chromosomes; nucleolus 3. Cytoplasm Semifluid, gelatinous, nutrient matrix Contains the “organelles” Organelles has highly specific functions which maintain the cells and allow it to properly perform its activities. 4. Endoplasmic Reticulum Highly convoluted system of membranes that are interconnected to form transform network tubules and flattened sacs within the cytoplasm. It has rough ER and smooth ER. 5. Ribosomes 18 to 22 nm in diameter. Consists of rRNA. Play important part in protein synthesis. Free or attached in the RER. 6. Golgi Complex Stack of flattened, membranous sacs. Packages newly synthesizes proteins into small membrane-enclosed vesicles for storage within the cell or export outside the cell (exocytosis). “Packaging plants” 7. Lysosomes and Peroxisomes Lysosomes - Contain lysozyme and other digestive enzymes - Phagocytosis and Autolysis o is a cellular process for ingesting and eliminating particles larger than 0.5 μm in diameter, including microorganisms, foreign substances, and apoptotic cells. Phagocytosis is found in many types of cells and it is, in consequence an essential process for tissue homeostasis.(Immune system response) o The enzymatic digestion of cells by the action of its own enzymes, and it mostly occurs in dying or dead cells. (rotting) Peroxisomes - Where hydrogen peroxide is both generated and broken down - Found in mammalian liver cells 8. Mitochondria Where most of the ATP (energy carrying molecules) are formed by cellular respiration. Energy is released from glucose molecules and other nutrients to drive other cellular functions. 9. Plastids Contains various photosynthetic pigments. Chloroplasts is one type of plastid, containing a green photosynthetic pigment called chlorophyll. Found in plant cells and algae. 10. Cytoskeleton System of fibers present throughout the cytoplasm. It strengthens, supports, and stiffens the cell, giving its shapes. - Microtubules: slender, hallow tubules (tubulins). - Microfilaments: slender, thread-like contractile structures which facilitate cell contraction. 11. Cell wall External structures that provide rigidity, shape, and protection. May contain cellulose, pectin, lignin, chitin, and some mineral salts. - Cellulose: polysaccharide, present in algae and plants. - Chitin: present in fungi and exoskeleton of arthropods. 12. Flagella and Cilia Flagella - Relatively long, thin structure, the organelle of locomotion. Cilia - Tend to be shorter (hair-like), thinner, and more numerous. Prokaryotic Cell 10x smaller than eukaryotic cells. Very simple cells than eukaryotic cells. Do not contain membrane-bound organelles. Reproduce by binary fission. Includes bacteria and archaeans. Prokaryotic Cell Structure 1. Cell Membrane Enclose the cytoplasm. Similar in structure and function to the eukaryotic cell membrane. Consists of proteins and phospholipids. Selectively permeable. There is whole lots of difference between Prokaryotic and Eukaryotic chromosome. 1. Prokaryotes have double stranded mostly circular chromosome while the Eukaryotes have double stranded linear chromosomes which contain all the basic information. 2. Prokaryotic cells usually have only one chromosome while the Eukaryotic cells can have multiple chromosomes. 3. Since Prokaryotic cells have only one chromosome, it doesn’t have homologous pair. On the other hand, Eukaryotic chromosomes are usually paired called homologous pair. These paired chromosomes are also called as their sister chromosomes. 4. Chromosomes in the Prokaryotic cells are found in cytoplasm in a sport called as nucleoid since there is no specified organelle. But in the case of Eukaryotic cells, chromosomes are found in membrane bound organelle called nucleus. This is also a basic difference between prokaryotic and eukaryotic cells. 5. Prokaryotic chromosome is very simple compared to the Eukaryotic one. Prokaryotic chromosome lack telomeres and centromeres sequences which is found in the Eukaryotic chromosomes. 6. The packaging of chromosome in Prokaryotic cell is rather simpler than the Eukaryotic cell. Prokaryotic chromosome is packed with the help of nucleoid associated proteins which helps in packaging. Eukaryotic chromosomes are much larger in size and requires special proteins called histone proteins which forms a special structure called nucleosomes when DNA is wrapped around it. 7. Replication of the chromosome in the Prokaryotes occurs at the beginning of the cell division while the replication in the Eukaryotic cells occurs in the S phase of the cell cycle. 8. Prokaryotic chromosomes have only one origin of replication while Eukaryotic chromosomes have multiple origin of replication. Origin of replication is the site or sequences on the chromosome where the replication is the site or sequence on the chromosome where the replication process is initiated. 9. Prokaryotic chromosome encodes for fewer proteins as compared to larger Eukaryotic chromosomes which codes for thousands of different proteins. 10. Prokaryotic chromosome achieves genetic recombination through horizontal gene transfer while genetic recombination in Eukaryotes is achieved by meiosis or fusion of different gametes. 2. Plasmid Small, circular molecules of double-stranded DNA that are not part of the chromosome. May contain 10 to hundred genes. May or may not be present in bacterial cell. 3. Cytoplasmic Particles Many tiny particle in the bacterial cytoplasm. Most of these are of clusters of ribosomes-polyribosomes or polysomes. 4. Bacterial Cell Wall Rigid exterior cell wall that defines the shape of bacteria. Consist of a complex macromolecule known as peptidoglycan. 5. Grain Stain The most widely used procedure for staining bacteria. Developed over a century ago by Dr. Hans Christian Gram. Bacteria are grouped as Gram-negative and Gram-positive. 6. Glycocalyx Slimy, gelatinous material produced by the cell membrane and secreted outside the cell wall. - Slime layer: not highly organized and is not firmly attached to the cell wall. - Capsule: highly organized and firmly attached to the cell wall. 7. Flagella Thread-like, protein appendages that enable the bacteria to move. Flagellated bacteria are said to be motile - (a) Monotrichous - (b) lophotichous - (c) amphitrichous - (d) peritrichous 8. Pili (Fimbriae) Hair-like structures, most often observed on Gram-negative bacteria. Kinds: - Pili that enables transfer of genetic material from one bacterial cell to another (conjugation). - Pili that enables bacteria to anchor themselves to surfaces. 9. Endospores Formed by a few bacteria when the environment in unfavorable for their survival. Firmucute Phylum Sporulation pertains to the process of forming endospore. Resistant to heat, cold, drying, and most chemicals. The discovery of Endospores: - John Tyndall concluded that certain bacteria can be killed by simple boiling, while others cannot be killed. Tyndallization. - Ferdinand Cohn called the small bodies in the bacteria “spores”. He concluded that spores are heat resistant. Prokaryotic Cell Reproduction Prokaryotic cells reproduce by binary fission. One cell (parent cell) splits into half to become two daughter cells. Before a prokaryotic cell can divide into half, its chromosomes must be duplicated. Generation time varies from one bacterial species to another (ex. E. coli, 20 mins.) Eukaryotic Cell Reproduction Eukaryotic cell reproduce in a process called mitosis. Mitosis is the type of division that gives rise to daughter cells for the purpose of tissue growth, regeneration or asexual (vegetative) reproduction.