Chapter 12: DNA Deoxyribonucleic Acid Section 1: The Discovery of DNA Discovery of DNA Scientist new that people had different traits because they had different genes. Scientist did not know what type of molecule made up our genes. Frederick Griffith • Studied bacteria that caused pneumonia • He figured out that you could change one strain of bacteria into another strain of bacteria – transformation Griffith’s Experiment Two Strains of Bacteria R strain - Harmless S strain – Deadly Discovery of DNA Explain the results of Griffith’s experiment. Why did mouse 4 die? Discovery of DNA Griffith’s Conclusion: “something” transformed the harmless bacteria into the deadly bacteria. (He called this process transformation) Oswald Avery – repeated Griffith’s work to determine which molecule was responsible for transformation • Conclusion: DNA was the transforming factor that caused the change in the R-strain Discovery of DNA Alfred Hershey & Martha Chase • Question: Are genes made of DNA or proteins? • What they know: viruses use other organisms to reproduce Viruses only contain DNA and a protein coat. Whichever virus particle enters the cell must be the material that makes up genes. Discovery of DNA Hershey and Chase • Experiment: – They tagged the virus DNA with blue radioactive phosphorous – They tagged the protein coat with red radioactive sulfur • Results: – the cells only contained blue radioactive phosphorous. • Conclusion: – Virus only injects DNA (confirms Avery’s results) Section 2: Structure of DNA Function: Stores and transmits genetic information. Structure: • Type of organic macromolecule = nucleic acid • Polymer = polynucleotide • Monomer = nucleotide – Each nucleotide contains 3 parts: 1. Sugar (deoxyribose) 2. Phosphate group 3. Nitogen-containing base Structure of DNA DNA has 4 different nitrogenous bases What is the structural difference between purine and pyrimidine bases. Chargaff • Analyzed the percentage of each base in a strand of DNA. • His results: – The amount of adenine is equal to the amount of thymine – Cytosine is equal to guanine – Why did he get these results? Structure of DNA Base Pairing • Adenine (A) always bonds with Thymine (T) • Guanine (G) always bond with Cytosine (C) Hydrogen Bonding • What is a hydrogen bond? • Hydrogen bonds hold the two strands of the DNA molecule together • There are 3 bonds between C and G • There are 2 bonds between A and T Structure of DNA • Rosalind Franklin – Took pictures of DNA using x-rays. – First person to determine that the shape of a DNA molecule was a double helix. Structure of DNA James Watson and Francis Crick • Built the first correct model of a DNA molecule. • What they learned . . . – DNA is made of two strands. – Each strand has a sugarphosphate backbone. – The bases are in the middle Structure of DNA • The strands are antiparallel – They run in opposite directions. – One strand is arranged 5’ to 3’ while the other strand is 3’ to 5’ – 5’ and 3’ refer to the carbon atoms in the deoxyribose sugar. Section 3: DNA Replication • How does the structure of DNA allow it to store information? • How does the structure of DNA allow it to replicate?replicate? DNA Replication DNA Replication How does it replicate? 1. Helicase: an enzyme that separates the 2 DNA strands by breaking the hydrogen bonds. – Nucleotides are added according to base pairing rules, using DNA polymerase. • DNA polymerase only move in one direction, from 5’ to 3’. DNA Replication 2. DNA Polymerase: adds nucleotides to the single stranded DNA according to base pairing rules. • DNA polymerase only move in one direction, from 5’ to 3’. DNA Replication • Leading Strand: the 5’ to 3’ strand, polymerase can add nucleotides to make one continuous strand. • Lagging Strand: the 3’ to 5’ strand, polymerase moves in the opposite direction. – Polymerase forms short segments of DNA called Okazaki fragments. DNA Replication 3. Ligase: connects together the Okazaki fragments in the lagging strand. Chapter 12 Practice Quiz Name the 3 parts that make up a DNA nucleotide. Which number represents a molecule of deoxyribose? Which numbers represent the parts of the nucleotide that make up the backbone of a DNA molecule? Which number represents that part of the nucleotide that can be found in the center of a DNA molecule? If DNA sequence is compose of 15% adenine; how much thymine, guanine, cytosine is in the DNA? Chapter 12 Practice Quiz Write the complementary sequence for the DNA molecule from top to bottom. What type of bond forms between two complimentary bases in a double stranded DNA molecule. Which end of the DNA molecule is the 5’ end (Top or Bottom)? How many nucleotides are shown in the diagram? Adenine and Guanine considered purine bases. How is the structure of purine different than pyrimidine's. Chapter 12 Practice Quiz 9. Adds DNA nucleotides during replication. 10. Connects together the Okazaki fragments. 11. Separates the double helix during replication. 12. The strand of DNA that runs 5’ to 3’ and can be made continuously. a. Helicase b. Ligase c. DNA Polymerase d. Leading Strand e. Lagging Strand DNA Replication Telomeres: The DNA found at the ends of the chromosome. – The DNA at the end of the chromosome is difficult to replicate – Telomerase adds short repeating segments of DNA to the chromosome