Background and methods Results and comments Using spectroscopy to monitor anthracene dimerisation Don Praveen Amarasinghe MOAC Doctoral Training Centre University of Warwick 24th September 2013 Background and methods Contents 1 Background and methods 2 Results and comments Results and comments Background and methods Results and comments Anthracene Small molecule with non-trivial structure. Used in calibration. Wavelength shifts in calibration samples. Could dimer formation 1 1 be the problem? Chandross, E. A.; Ferguson, J.; McRae, E. G. J. Chem. Phys. 1966, 45 (10), 3546–3553. Background and methods Spectroscopic methods Absorbance spectroscopy Fluorescence spectroscopy Raman (linear difference) spectroscopy Results and comments Background and methods Absorbance spectroscopy Results and comments Background and methods Results and comments Absorbance spectroscopy 2 Measure intensity of light before, I0 , and after, I passing through sample. Absorbance, A, is calculated using: I0 A = log10 I Beer-Lambert law — A ∝ Concentration. 2 Figure taken from http://faculty.sdmiramar.edu/fgarces/ Background and methods Results and comments Fluorescence spectroscopy What about light emitted from the sample? Measure intensity of light emitted from sample at right angles to the path of excitation light. Background and methods Results and comments Raman spectroscopy Used to study the vibrational energy levels of a molecule. Shine laser (UV-vis) light at sample. Record when the light scattering is inelastic. Virtual Energy States Vibrational Energy States Rayleigh Scattering Stokes Raman Scattering Anti - Stokes Raman Scattering Background and methods Results and comments Raman linear difference spectroscopy Based on work by Kowalska et al. 3 Dry samples on polyethylene (PE) film and stretch to align the molecules. Shine polarised Raman laser light at sample — parallel and perpendicular to stretch direction. “Subtract perpendicular from parallel”. 3 Kowalska et al. Anal. Chem. 2012, 84, 1394–1401. Background and methods Results and comments Solution preparation Anthracene solutions prepared with methylcyclohexane solvent at concentrations between 0.05 and 2 mg ml−1 . Background and methods Contents 1 Background and methods 2 Results and comments Results and comments Background and methods Absorbance spectra Spectra of anthracene solutions in cuvettes Results and comments Background and methods Results and comments Absorbance spectra Spectra of anthracene solutions dried on taut, unstretched PE film. Background and methods Results and comments Absorbance spectra Spectra of anthracene solutions dried on stretched PE film. Background and methods Results and comments Fluorescence spectra Fluorescence emission spectra with excitation radiation at 252 nm. Background and methods Results and comments Raman spectra R L S - P o w d e r R L S - 2 m g /m l A n th ra c e n e o n 1 .8 x S tre tc h e d P E R L D - 0 .5 m g /m l A n th ra c e n e o n 1 .8 x S tre tc h e d P E 0 R L D - 2 m g /m l A n th ra c e n e o n 1 .8 x S tre tc h e d P E 5 0 0 1 0 0 0 1 5 0 0 2 0 0 0 W a v e n u m b e r (c m -1 ) 2 5 0 0 3 0 0 0 3 5 0 0 Background and methods Results and comments Raman spectra Summary of findings: The Raman spectra obtained from powder samples and solutions dried on film are consistent with previously published Raman spectra of anthracene 4 . Raman linear difference data indicate changes in orientation of molecules between different concentrations. 1557 1480 1163 1008 cm−1 cm−1 cm−1 cm−1 (C-C in plane stretching) (C-C in plane stretching) (C-H in plane bending) (C-H in plane bending) However these changes appear in either stretched PE film data or unstretched film data - not both. 4 Abasbegovic, N.; Vukotic, N.; Colombo, L. J. Chem. Phys. 1964, 41 (9), 2575–2577. Background and methods Results and comments Remarks Need to study concentrations between 1 mg/ml and 2 mg/ml. Difficulties in maintaining solubility of more concentrated solutions. Prevalence of noise in Raman spectra of low concentrations of anthracene. Spectral changes might be due to higher order structures or other effects! Background and methods Results and comments Conclusions Absorbance spectroscopy data appear to indicate the formation of ground-state dimer with increasing concentration of solution, but there are inconsistencies (Beer-Lambert law). Fluorescence spectra also indicates ground-state dimer formation. Raman linear difference spectral data can be used to analyse anthracene, however the data obtained cannot be used to draw concrete conclusions. More work required to investigate higher-order structures and their spectral effects. Background and methods Results and comments Acknowledgements Kasra Razmkhah, Nikola Chmel & Alison Rodger. All of the Biophysical Chemistry Lab on 6th Floor Chemistry. Birmingham Science City scheme for the Raman instruments. MOAC DTC staff and fellow students. The University of Warwick and EPSRC. Thank you for listening! :-) Any questions?