VCE BIOLOGY UNIT 3 EXAM REVISION Gary Simpson Contents • • • • Area of Study 1 – Molecules of Life Past Exam Questions Area of Study 2 – Detecting and Responding Past Exam Questions • Don’t forget the Exam is on Tuesday 8 June from 9.00am to 10.45am. Area of Study 1 – Molecules of Life The chemical nature of the cell • Biomacromolecules are the big molecules • • involved in the biomechanical processes of organisms. Autotrophs – organisms able to synthesise their own organic macromolecules from inorganic molecules, either by photosynthesis or chemosynthesis. Heterotrophs – organisms that must consume other organisms to synthesise macromolecules Structure and Function of Carbohydrates • Organisms use carbohydrates as an energy source and for structural components of cells. The structure and function of lipids • Lipids are a diverse group of molecules which include fats, oils and steroids. Used for energy storage, cell membranes and transmission of chemical signals. Structure and function of DNA and RNA • DNA is a large protein found • in the nucleus of eukaryotic cells and the cytoplasm of prokaryotic cells. DNA contains the codes for all the proteins made by a cell. RNA is used to transmit the information contained in the DNA and construct the proteins coded for by the DNA Protein Synthesis • Transcription – occurs in the nucleus. Section of DNA unzipped and copied onto mRNA • Translation – mRNA moves to the ribosome. tRNA bring amino acids to the ribosome based on sequence of nucleotides (read as a triplet) • Proteins are formed by the amino acids joining together into a chain. Genetic Code • Pieces of information in the code based on triplets of nucleotides • Code is non-overlapping • Code is universal • Code is said to be redundant or degenerate as more than one triplet can code for the same amino acid • Code contains instructions to assemble amino acids sub-units • Information is unambiguous • Always includes a START and a STOP instruction The proteome • The proteome is a term used to describe the complete set of proteins produced by a particular cell. • Almost everything that occurs in the cell relies on proteins. • All the proteins are made from combinations of just 20 amino acids. Cell Organelles • Plasma Membrane • The plasma membrane • or cellular membrane is made up of two layers of phospholipids. They control what leaves and enters the cell. Movement of Molecules • Diffusion/Osmosis • Diffusion is the movement of molecules of a • substance from an area of high concentration of that substance to an area of low concentration. Osmosis is the movement of water from an area of low concentration of a dissolved substance to an area of high concentration of that dissolved substance. Movement of Molecules • Isotonic • Hypotonic • Hypertonic Movement of Molecules • Facilitated Diffusion • Some molecules required by the cell are either • too large to move by diffusion or the cell already has a high concentration of the molecule, so diffusion won’t take place. Energy is required to move these molecules across the membrane using either carrier proteins or channel proteins – this is known as active transport. Cell Organelles • Nucleus • The nucleus contains the DNA which contains the information that controls the production of proteins by the cell. Cell Organelles • Ribosomes • Ribosomes are extremely small molecules that play an important role in translating the code from the DNA into proteins. Cell Organelles • Golgi Apparatus • The Golgi Apparatus is responsible for packaging these molecules and transporting them around the cell or to the membrane. Cell Organelles • Endoplasmic Reticulum • Rough ER (with ribosomes attached) is responsible for production of membrane proteins and proteins secreted from the cell. • Smooth ER are responsible for the production of phosopholipids and cholesterol. Cell Organelles • Vesicles • These are membrane bound organelles that are associated with the transport of biomolecules within the cell. Enzymes • Enzymes are protein based molecules that act as • • catalysts in chemical processes within cells. They operate best within given ranges of temperature and pH. Outside those preferred ranges the enzyme either stops working or becomes denatured – the active site is changed and no longer matches the substrate that the enzyme works upon. Metabolism Catabolic Reactions • These reactions break down complex molecules into simpler molecules. • Cellular Respiration is the most important of these, breaking down glucose to release energy. • This occurs first in the cytosol and then is finished within the mitochondria. Metabolism Anabolic Reactions • These reactions build up complex molecules from more simple molecules. • Photosynthesis is the most important of these making glucose to store energy from carbon dioxide and water. • This occurs in the chloroplasts of green plants. Applications of Molecular Biology • There are many applications of molecular biology. • Difficult to study for – rather you need to be prepared to analyse situations to explain how the molecular biology is being used in a particular application. • No useful questions for this in past papers. Area of Study 2 – Detecting and Responding Signal Transduction • Organisms need to be able to detect and respond to • changes in the external and internal environment. There are five principles to communication: – a signal is produced (by production of a signalling molecule in a cell) – the signal is detected (by a receptor protein on the target cell) – the signal is transferred until it reaches its target – transduction (through the cell) – a response is made to the signal (the cell responds to the signal) – the signal is switched off after the response is made (the signalling cell switches off production of the signalling molecule). • These principles can be applied to external signals and to internal signals of the organism and the cells. Coordination and Regulation • Organisms need to be able to detect and • • respond to changes in their external and internal environment. Receive external information with chemoreceptors, mechanoreceptors, photoreceptors, thermoreceptors and pain receptors (collectively known as exteroreceptors). Receive internal information from interoceptors which measure changes in temperature, water content, blood sugar etc throughout the body. Homeostasis The ability of an organism to maintain a relatively stable internal environment. • Stimulus-response model. A stimulus is received by a receptor which passes the information to a central processing unit which analyses the information and send a message to an effector which causes a response. • Negative feedback. The response to the stimulus is the opposite to the stimulus. • Positive feedback. The response to the stimulus is in the same direction as the stimulus, reinforcing the stimulus. Nervous System This comprises two parts – the central nervous system and the peripheral nervous system. This is a system of nerves found throughout the body. The response to a stimulus is quick, but the effect is generally short lived. Endocrine Systems Both plants and animals use chemical messengers, called hormones, to respond to changes within the internal environment. The response time is slow as the hormone needs to move through the blood system or along phloem, but the response is felt for a long period of time. Cellular Communication • Cells need to communicate within the cytosol to control cellular processes eg. The reading of DNA sequences to create proteins • Cells communicate with each other to regulate growth and development and responses to external stimuli eg. The presence of pathogens Plant Hormones • Plant hormones regulate growth, development • • • • • and reproduction and respond to changes in the external and internal environment of the organism. Auxins Cytokinins Gibberellins Abscisic Acid Ethylene Detecting Self and Non-self Molecules Disease is defined as any change that impairs the function of an individual. Infectious disease is caused by organisms known as pathogens. • Bacteria • Virus • Viroid • Prion • Eukaryotic organisms Lymphatic system • The lymphatic system consists of the bone marrow, thymus gland, lymph nodes, mucous tissues, spleen and many vessels which transports lymphocytes and removes foreign material from the body. Non-specific immunity • The immune system recognises foreign material • • from body tissues by recognising proteins embedded in the cell membrane. The first line of defence is the bodies surfaces – skin, digestive system, respiratory, urinary and reproductive system. The second line of defence is the phagocytes – these white blood cells simply engulf all objects that do not have self markers. Specific immunity • If a pathogen gets past the first two lines of defence then two things may occur. Humoral response • B lymphocytes recognise the pathogen as non-self and releases antibodies to bind with the active sites on the pathogens. Cell-mediated response • T lymphocytes do not produce antibodies, rather they either recognise antigens and stimulate B cells or kill body cells infected with viruses. Disorders of the immune system • Allergies tend to be exaggerated responses of • the immune system to relatively harmless substances. An allergic response sees the Mast cells and Basophil cells releasing histamines causing swelling and inflammation. Auto-immune diseases such as multiple sclerosis occur when the immune system does not recognise self cells and starts to attack and destroy them. Acquired Immunity • Organisms gain immunity to disease by learning • to recognise the antigens of pathogens. Humans have learnt to mimic this response by using dead or attenuated organisms. It is also possible to gain immunity by giving a person another’s antibodies. This occurs when nursing mothers feed their babies. Barriers to infection in plants • Physical – the thick bark of stems and trunks, and hairs and thick waxy cuticle on the leaves prevents infection. • Chemical – wounds are filled with resin, infected leaves and branches are shed and enzymes and antibiotics are secreted to destroy or deter pathogens.