Segregation = separation of the 2 alleles of a gene during meiosis Independent assortment = alleles of one gene segregate independently of the alleles of other genes (due to random orientation of chromosomes during metaphase I) Unlinked genes = genes found on different chromosomes Segregate independently Linked genes = genes found on same chromosome & always inherited together Do not segregate independently Unlinked Genes Linked Genes Found on different chromosomes Found on same chromosome Segregate independently of other Do not segregate independently genes Inherited together (unless crossing- over occurs) An exception to Mendel’s law of IA Thomas Hunt Morgan: the Fruit Fly scientist (Drosophila melanogaster) Born 1866; college at 16; PhD from Johns Hopkins at 24; Nobel Prize at 67 He & his student observed that yellow body and white eyes are inherited together, and so established idea of “gene linkage” He & his student, Alfred Sturtevant, created the first ever genetic map (identifying the locus of genes on a chromosome) 2 types of gene linkage: Autosomal gene linkage = genes on same autosome Sex linkage = genes on the X chromosome APPLICATION: Dihybrid cross = shows inheritance of 2 traits Dihybrid cross = good way to show independent assortment of genes The chance of a gamete containing S or s will not affect its chance of containing Y or y. The chance of a gamete containing S or s = ½ The chance of a gamete containing Y or y = ½ The chance of a gamete containing two specific alleles (SY or Sy or sY or sy) = ½ * ½ = ¼ S and Y alleles segregate into gametes independently of each other. Skill: Complete p 447 Skills Nature of Science: Looking for patterns, trends & discrepancies: Thomas Hunt Morgan – discovered non-Mendelian ratios in Drosophila melanogaster (fruit fly) Observed thousands and thousands of fruit flies by hand Critical of Mendel’s theory of inheritance Believed variation was better explained by environmental influence, then reconsidered this Morgan’s studies reinforced some of Mendel’s conclusions AND identified exceptions to principle of independent assortment Variation = differences between individual organisms Discrete (discontinuous) variation = specific number of distinct categories E.g. blood types A, B, AB or O; purple or white flowers; free or attached earlobes Frequency of blood types in US: Continuous variation = variation within a population in which a graded series of intermediate phenotypes falls between the extremes (a complete range of variation) E.g. human height, human intelligence, hair, eye & skin color, bean mass Shows normal distribution Means that more than one gene is involved = polygenic inheritance Application: Continuous variation due to the differences between categories is subtle and the effects of the environment blur these differences so much that they are undetectable E.g. skin color – due to polygenetics and environment (exposure to UV) E.g. identical twin athletes with different diets & exercise routines E.g. identical mice clones fed different diets Skill: Linked genes are inherited together, unless crossing over occurs Recombination = new combination of alleles that is different from parents Recombinants = individuals that have the new combination of alleles (different from parents) A. B. C. D. Aabb, AaBb AaBb, aabb aabb, Aabb Aabb, aaBb dihybrid test cross recombinants JQ linked genes jq JQ and JJ A. jq Jq Qq and Qq B. Qq Jq JJ and jQ C. jq JQ jq and Jq D. jq jQ SKILL: The expected ratio of a dihybrid cross of 2 heterozygous individuals is 9:3:3:1. What if the observed ratio is different? Is there a significant difference? Are the differences between observed & expected due to human error (e.g. sampling error) or due to chance alone? “Statistical significance" = When a statistic is significant, it simply means that you are very sure that the statistic is reliable. It doesn't mean the finding is important or that it has any decision-making utility. This means that you are very sure that the difference is real (i.e., it didn't happen by fluke). It doesn't mean that the difference is large or important. Significance is a statistical term that tells how sure you are that a difference or relationship exists. For the statistician, it may be wise to adopt a policy of always referring to "statistical significance" rather than simply "significance" when communicating with the public. (http://www.statpac.com/surveys/statistical-significance.htm) Chi squared test Probability Degrees of freedom 0.99 0.950 0.05 0.01 1 0.000 0.004 3.84 6.64 2 0.020 0.103 5.99 9.21 3 0.115 0.352 7.82 11.35 Which of the following is the correct response? A. Accept the hypothesis because the Chi-squared value is less than 3.84. B. Reject the hypothesis because the probability is less than 0.05. C. Accept the hypothesis because the Chi-squared value is less than 5.99. D. Reject the hypothesis because there is not enough evidence.