Biological diversity is usually the sign of a healthy ecosystem. The greater the diversity of organisms with in an ecosystem, the greater is the chance that some of those organisms will be able to survive change. There are two levels of biological diversity: 1. 2. Genetic diversity, which describes the variety of genes that code for different traits in a given species Species diversity, which describes the number of different species. It is often difficult to determine if subtle physical differences are variation within a species or variation between different species of closely related organisms. Therefore, scientists need a classification system to help them study ecological diversity. Taxonomy – the science of classification according to the inferred relation ships among organisms Biological classification systems have two main purposes: 1. 2. Identifying organisms Providing a basis for recognizing natural groupings of living things. Carl Linnaeus (1707-1778) Developed a system of classification based on an organism’s physical and structural features, and operated on the idea that the more features organisms have in common, the closer their relationship. Carl Linnaeus (1707-1778) He was the first to use: Binomial nomenclature a method of naming organisms by using two names – the genus name and the species name. Scientific name is often based on some characteristic such as colour or habitat: Example Castor canadensis Caster meaning beaver and canadensis meaning from Canada The first part of any scientific name is called the genus. The second part is called the species. The two-name system provides an added advantage by indicating similarities in anatomy, embryology, and evolutionary ancestry. Present classification system there are 8 main levels or taxa. 1. 2. 3. 4. 5. 6. 7. 8. Domain Kingdom Phylum Class Order Family Genus species Today most scientists believe that organisms have changed over time. The history of the evolution of organism is called phylogeny. Relationships are often shown in a type of diagram called a phylogenetic tree. Crash Course – Phylogeny Video Read pages 134-139 Do questions 6 and 7 on page 139 Investigation pg 162 More Dichotomous Key Practice (Send these to me) Crash Course Video - Evolution Evidence of evolution comes from many lines of investigation. Some from direct observation and some more indirect. Direct Evidence: Fossils Radiometric dating Indirect Evidence Comparative Anatomy Homologous structures Analogous structures Embryology Vestigial Organs Physiology Behaviour Plant and animal breeding Biochemistry and genetics The geographic distribution of species Paleontology – The study of fossils Fossilized remains, impressions, and traces of organisms from past geological ages provide scientists with direct physical evidence of past life. Patterns found in fossils: 1. 2. 3. Different species lived on Earth at various time in the past. The complexity of living organisms generally increases from the most distant past to the present. Living species and their most closely matching fossils are typically located in the same geographic region. PBS Video – What do fossils tell us Organic components of the organism are replaced by minerals. Impressions left by organisms are preserved by the solidification of mud. Organisms can sometimes be caught in amber and preserved Mammoths, bison and other extinct mammals have been found frozen in Arctic ice. Acidic Bogs-conditions slow decomposition PBS Video - Fossilization Radiometric dating use the radioactive decay of certain elements to determine the age fossils Example: Carbon-14 PBS Video – Radiometric Dating Biogeography explores the variation and distribution of live over the Earth’s surface, both today and the past. Earth’s landmasses have undergone dramatic changes by the process of continental drift. Evidence from biogeography suggest that different species evolved independently in isolated parts of the world. A comparison of the physical anatomy and genetic makeup of organisms also provides evidence. Comparative Anatomy Homologous structures Structures having similar genetic origin but different uses in different species. Adaptive radiation: The pentadactyl limb has evolved to suit many niches: digging, running, flying, swimming, etc. Ex: Flipper of dolphin and a forelimb of dog suggests a common ancestor Analogous structures Structures which are similar in function and appearance but came from different ancestors. Examples: wing of an insect and a bird Good indicators that these organisms did not evolve from a common ancestor Illustrates convergent evolution development of similar forms from unrelated species due to adaptation to similar environment Crash Course Video – Comparative Anatomy Embryology The study of organisms in their early stages of development. Closely related organisms go through similar stages in their embryonic development similarities in embryos suggests these organisms have an evolutionary relationship. Haeckel’s controversial pictures Exaggerated the similarities between embryos to support his scientific ideas The following diagrams are examples of these. Mammals do show similar embryonic development to each other though PBS Video - Embryology Vestigial Organs A structure is considered vestigial because it's not performing the function it was designed to perform, as compared to other creatures with the same part Examples: coccyx and appendix in humans, vestigial leg bones in snakes Vestigial Organs The appendix and coccyx (along with other common human organs like tonsils, wisdom teeth, etc) do seem to have some functions in the body Helping the immune system Supporting organs However these are not the functions they seem to be designed to carry out. Vestigial Organs In other vertebrates, the appendix is much larger and more developed and aids in cellulose digestion (a plant carbohydrate that we can no longer break down) So we consider it vestigial, not because it has no function at all, but because it is not doing what is used to (when our diet was more plant based) Evidence of evolution has also been found by comparing biochemical characteristics of different species. Biochemical Analysis of chemicals can be used to show evolution DNA and cytochrome enzyme C (respiration) are similar in all organisms DNA analysis-used determine how closely related organisms are Evidence suggest a common ancestor Crash course video – Developmental Evolution Inherited: Determined by the DNA (genetic material) inherited from the parent i.e. hair, eye and skin color Acquired: Developed over life time. i.e. basketball skills, musical ability Lamarck believed that new species were continually being created by spontaneous generation Spontaneous generation – the belief that living things arose from non-living matter. Theory of Use and Disuse: Use-remains strong. Disuse-weakens and disappears. For example snakes legs. USE Each body part possesses a “will” which allows it to change in order to better fit its environment. Eg. Short necked giraffe stretches its neck to reach tree tops and it develops a longer neck DISUSE If a body part is not used it will begin to disappear Eg. Nocturnal animals (ie. Bats) lose their vision Theory of Acquired Traits: Traits acquired in life time could be passed on to offspring. Inheritance of acquired characteristics “Use and Disuse” implies an organism can sense its needs and physically change to meet those needs. Acquired characteristics are not inherited Never confirmed by experimentation. PBS Video – Charles Darwin 1. Overproduction 2. Variation. 3. Competition 4. Survival of the fittest 5. Passing on of successful traits (speciation) Crash Course Video – Natural Selection Overproduction means that the number of offspring produced by a species is greater than the number that can survive. Differences among traits occur among members of the same species. No two individuals are exactly alike Caused by: Mutation Sexual Reproduction Competition Organisms of the same species, as well as those of different species, must compete for limited resources such as food, water, and a place Natural selection: Nature selects the organisms that survive The most fit individuals survive Fittest means that the individuals are best suited to the environment Successful individuals reproduce and pass on their traits Over numerous generations, new species arise by the accumulation of inherited variation When a type is produced that is significantly different from the original, it becomes a new species. Darwin Lamarck Organism vary Individuals change regardless of the to suit their environment environment The environment then Change is based on determines whether a the need or “want” variation is harmful to change (die) or helpful (survive) Video – Darwin vs. Lamarck Lamarck might be right? Read this article Variability in a species may arise from two biological processes: 1. 2. Mutations Sexual reproduction DNA, the hereditary material, is found in the chromosomes of a cell. Genes are segments of DNA that code for Specific traits. Mutation - a random change in the DNA sequence in a chromosome. Mutations can by caused by: 1. 2. Environmental factors Chemicals Radiation Errors that arise when cells replicate Mutations are rare in individuals. Neutral mutation – a mutation that has no effect on the organism Harmful mutation – a mutation that reduces an organism’s fitness Beneficial mutation – a mutation that enhances an organisms’ fitness. Beneficial mutations can be harmful to us, when they improve bacteria’s fitness PBS Video – Antibacterial Resistance Summary: Mutations occur at random, with harmful mutations being more common than beneficial mutations. Harmful mutations are selected against and therefore do not accumulate over generations. Although beneficial mutations are rare, they are selected for and may accumulate over the generations. Beneficial Mutations in Humans Sickle Cell Anemia is an example of a DNA mutation that can be beneficial in some environments. PBS Video – Sickle Cell Anemia and Malaria A mutation that protects against HIV PBS Video – Double Immunity Asexual reproduction – production of offspring from a single parent: offspring inherit the genes of that parent only. All offspring are identical to parents. Sexual reproduction – the production of offspring by union of sex cells from two different parents. Offspring are never identical to the parents or to other siblings. Why are sexually-reproducing species so variable? There are three reasons. 1. 2. 3. Sexually-reproducing species have two copies of each gene. One from each parent. The assortment of genes that an offspring inherits from either parent is determined randomly. Sexually reproducing species choose different mates. Species A group of similar organisms which share a common gene pool Organisms of the same species normally interbreed in nature and are capable of producing fertile offspring Population: A group of individuals of the same species occupying a given area at a certain time 1. Speciation – the formation of new species. Most new species are believed to arise by a three-step process called allopatric speciation. A physical barrier separates a single interbreeding population into two or more groups that are isolated from each other. 2. 3. Natural selection works on the separated groups independently, resulting in inherited differences in the two populations. (differences in selective pressures). Physical and behavioral differences accumulate can no longer be sexually compatible. New species evolve from a common ancestor in response to a new environment Eg. From a common finch with a mid-sized beak the following finches evolved Finch with a long beak for poking wood Finch with a short, hard beak for cracking seeds Finch with a long beak for drinking nectar Crash Course Video – Speciation PBS video - Speciation and Natural Selection Theory of gradualism – the idea that speciation takes place slowly. Theory of punctuated equilibrium- the idea that species evolve rapidly followed by a period of little or no change. This theory has three main assertions: 1. 2. 3. Many species evolve very rapidly in evolutionary time Speciation usually occurs in small isolated populations After an initial burst of evolution, species are well adapted to their environment and do not need to change significantly for a long period. Transformation of one species into another Branching evolution: one or more species branch off a parent species which continues to exist. Convergent Evolution the development of similar forms from unrelated species due to adaptation to similar environments. Ex: the torpedo shape of dolphins and sharks. Over time, the two began to look more and more alike.