Chemistry of Life: Part 1 AHSGE Science Standards (See Handout) 2a Identify functions of carbohydrates, lipids, proteins and nucleic acids in cellular activities. 3 Identify reactants and products associated with photosynthesis and cellular respiration and the purposes of these two processes. I. Chemistry of the Cell : Key Elements A. An element is a type of matter composed of only one kind of atom which cannot be broken down to a simpler structure. I. Chemistry of the Cell : Key Elements B. The following six elements are commonly found in living cells: sulfur, phosphorous, oxygen, nitrogen, carbon, & hydrogen (SPONCH). See Figure 3.1 Key Elements of Living Cells I. Chemistry of the Cell : Key Elements C. These elements make up 99% of all living tissue & combine to form the molecules that are the basis of cellular function. I. Chemistry of the Cell : Key Elements D. Carbon –1. Carbon is especially important because 1 carbon atom can make covalent bonds with 4 other atoms, resulting in the formation of very stable & complex structures. –2. Carbon is in all living things as well as in the remains of living things. I. Chemistry of the Cell : Key Elements E. Molecules containing carbon are called organic molecules, while those without carbon are called inorganic molecules. F. Cellular reactions occur in great part between biological molecules called biomolecules. I. Chemistry of the Cell : Key Elements G. The 4 primary classes of cellular biomolecules are carbohydrates, lipids, proteins and nucleic acids. H. Each of these is a polymer, a long chain of small repeating units called monomers. II. Carbohydrates II. Carbohydrates A. Carbohydrates are often called sugars and are an energy source. B. Structurally, they are chains of carbon units with hydroxyl groups (-OH) attached. C. The simplest carbohydrates are monosaccharides. II. Carbohydrates D. The ends of these sugars bond & unbond continuously, so that the straight chain & cyclic (ringlike) forms are in equilibrium. See Figure 3.2 Fischer diagram of glucose & Figure 3.3 Ribose E. II. Carbohydrates These monosaccharides may join together to form disaccharides (2), oligosaccharides (3-10) or polysaccharides (10+), depending on how many monosaccharides make up the polymeric carbohydrate. II. Carbohydrates F. Examples –1. Monosaccharides – fructose & glucose –2. Disaccharides – sucrose (table sugar) –3. Oligosaccarides – no common names –4. Polysaccarides – starch & cellulose (complex carbs) III. Lipids III. Lipids A. Lipids are fats, made up of chains of methylene (-CH2) units. B. The chains may be long or short, & they may be straight or fused into rings (cyclic). C. They function as fat molecules that store energy. III. Lipids D. They are structural components of the cell membrane. E. Important lipids include: waxes, steroids, fatty acids & triglicerides. See Figure 3.4 Lipids F. Example – butter A. IV. Proteins Proteins consist of long, linear chains of polypeptides. –1. The polypeptide is a chain of amino acids monomers. B. There are 20 standard amino acids which combine to form every single protein needed by the human body. See Figure 3.5 Polypeptide & Figure 3.6 Protein IV. Proteins C. Since mammals cannot make all 20 amino acids themselves, they must eat protein in order to maintain a healthy diet. D. Examples – animals (meat) & vegetables (beans) V. Nucleic Acids V. Nucleic Acids A. Nucleic acids are found in the nucleus of a cell. B. The nucleic acid polymer is made up of nucleotide monomers. –1. The nucleotide monomer consists of a sugar, a phosphate group & a nitrogenous base. See Figure 3.7 A Nucleotide V. Nucleic Acids C. Nucleic acids are the backbone of the following genetic material: –1. DNA (deoxyribonucleic acid) directs the activities of the cell & contains the sugar deoxyribose. –2. RNA (ribonucleic acid) is involved in protein synthesis & contains the sugar ribose. V. Nucleic Acids D. The bulk of the cell is made up of water. See Figure 3.8 Composition of the Cell Complete the Section Review 1: The Chemistry of the Cell Cells & Cellular Transport: Part 2 VI. Solutions A. A solution is a liquid mixture of solute dissolved in solvent. –Example – Think of salt water, a solution in which salt (solute) is dissolved in water (solvent). VI. Solutions B. The interior of a cell is also a solution. C. The cytoplasm is a watery jelly-like substance (solvent) that contains a variety of substances (solutes). VI. Solutions D. Maintaining the concentration of solutes in the cytoplasm is critical to cell function. E. This ideal balance of solutes within the cell is a state the cell strives to maintain through a variety of mechanisms. –1. This process is called homeostasis. VII. Cell Membrane VII. Cell Membrane A. The main purpose of the cell membrane is to regulate the movement of materials into & out of the cell. B. The membrane is semipermeable, or selectively permeable, meaning that only certain substances can go through. VII. Cell Membrane C. The cell membrane is composed of a phospholipid bilayer. See Figure 2.9 Phospholipid Bilayer – 1. Each phospholipid layer consists of phosphate groups attached to 2 fatty acid tails. VII. Cell Membrane –2. The layers arrange themselves so that the phosphate heads are on the outer edges of the membrane, & the fatty acid tails compose the interior of the membrane. VII. Cell Membrane –3. Globular proteins used for various functions are embedded in the cell membrane. –4. The phospholipids are free to move around allowing the membrane to stretch & change shape. VIII. Cellular Transport A. Passive Transport –1. Passive transport is spontaneous & does not require energy. –2. Molecules move spontaneously through the cell membrane from areas of higher concentration to areas of lower concentration. VIII. Cellular Transport –3. They move with the concentration gradient. –4. The 3 types of passive transport are diffusion, facilitated diffusion, & osmosis. VIII. Cellular Transport B. Diffusion is the process by which substances move directly through the cell membrane. See Figure 2.10 Diffusion C. Facilitated diffusion involves the help of a carrier protein to move a substance from 1 side of the cell wall to the other. VIII. Cellular Transport E. Osmosis is the movement of water from an area of high water concentration to an area of low water concentration through a semipermeable membrane. See Figure 2.11 Osmosis VIII. Cellular Transport –1. Osmosis is the diffusion of water. –2. Osmosis can occur in either direction depending on the concentration of dissolved material inside & outside the cell. VIII. Cellular Transport –3. Defining the solution concentrations relative to 1 another will predict the direction in which osmosis will occur. –4. Diffusion of water (osmosis) across a cell membrane always occurs from hypotonic to hypertonic. VIII. Cellular Transport –5. 3 situations are possible: a. Hypotonic Solution b. Hypertonic Solution c. Isotonic Solution a. Hypotonic Solution –1) The solution surrounding the cell membrane has a lower concentration of dissolved substances than the solution inside the cell membrane. –2) The solution outside the membrane is hypotonic with respect to the solution inside the cell membrane. –3) The cell will experience a net gain of water & swell. See Figure 2.12 Possible Results of Osmosis b. Hypertonic Solution –1) The solution surrounding the cell membrane has a higher concentration of dissolved solute than the solution inside the cell membrane. –2) The solution outside the membrane is hypertonic with respect to the solution inside the cell membrane. –3) The cell will lose water to its surroundings causing it to shrink. See Figure 2.12 c. Isotonic Solution –1) The concentration of dissolved solutes is the same inside the cell as it is outside the cell. –2) These solutions are said to be isotonic with respect to each other. –3) There will be no net movement of water across the cell membrane. See Figure 2.12 VIII. Cellular Transport F. Placing plant cells in a hypotonic solution causes the plant cell membranes to shrink away from the cell wall. –1. This process is called plasmolysis. VIII. Cellular Transport –2. Plasmolysis can result in plant cell death due to water loss. –3. A wilted plant is showing signs of plasmolysis. VIII. Cellular Transport G. Placing a plant in a hypertonic solution has an opposite effect: –1. The cell will swell until the cell wall allows no more expansion. –2. The plant now becomes very stiff & turgid. Turgid & Plasmolysed VIII. Cellular Transport H. Active Transport –1. The cell may need to move material across the cell membrane against the concentration gradient. –2. The cell must expend energy. –3. The movement of substances from an area of low concentration to an area of high concentration is called active transport. VIII. Cellular Transport –4. The movement is characterized by its directionality. a. Exocytosis b. Endocytosis a. VIII. Cellular Transport Exocytosis –1) Exocytosis is a form of active transport that removes materials from the cell. –2) A sac stores the material to be removed from the cell, & then moves near the cell membrane. VIII. Cellular Transport –3) The cell membrane opens, & the substance is expelled from the cell. –4) Waste materials, proteins, & fats are examples of materials removed from the cell this way. See Figure 2.13 Schematic of Exocytosis & Endocytosis VIII. Cellular Transport b. Endocytosis –1) Endocytosis, another form of active transport, brings materials into the cell without passing through the cell membrane. –2) The membrane folds itself around the substance, creates a vesicle & brings the substance into the cell. VIII. Cellular Transport –3) Some unicellular organisms, such as an amoeba, obtain food this way. See Figure 2.13 Schematic of Exocytosis & Endocytosis Exocytosis & Endocytosis IV. Factors Affecting Cellular Activity A. Cellular activity (metabolism, reproduction, & movement) is affected by several factors: –1. Cells cannot grow to extremely large sizes due to the ratio between cellular surface area & internal cell volume. –2. Environmental factors (temperature, light, & pH) affect cellular activity. V. Fluid Pressure A. Fluids –1. Fluids are liquids & gases. –2. The collisions of the particles against the surface of the container cause the gas or liquid to exert pressure upon the container. See Figure 2.14 Particle Motion in Gases V. Fluid Pressure B. Pressure –1. Pressure is a force (push or pull) applied uniformly over an area. –2. Examples of how pressure affects humans & plants: a. Blood pressure in humans b. Turgor pressure in plants a. V. Fluid Pressure Blood pressure –1) Blood is moved throughout the human body through the use of pressure. –2) Blood pressure is the pressure exerted by the blood on the walls of the blood vessels. V. Fluid Pressure –3) The continuous cycle of the heart contracting & relaxing creates the blood pressure measured in millimeters of mercury (mm Hg). b. V. Fluid Pressure Turgor pressure –1) Plants must take up water from the surrounding environment through the use of osmosis. –2) Once a plant cell is filled with water, its vacuoles become swollen & large. The cell has a large amount of fluid inside causing a higher pressure. V. Fluid Pressure –3) The cell wall begins to exert pressure on the neighboring cell. The internal pressure inside the cell is called turgor pressure. See Figure 2.15 Turgor pressure from within the cell Complete Section Review 2: The Cell Membrane & Cellular Transport Complete Review