Induction of -galactosidase in Escherichia coli Pre-Class Assignment: Please view the following video prior to class. There will be a fun team competition (prizes!) to assess your understanding before we begin the exercise. http://www.dnaftb.org/33/animation.html Principle: We are going to test the hypothesis that specific environmental signals cause certain genes within a cell to become active. In Part I of the experiment transcription of the lac operon within E. coli cells was induced by addition of an inducer, thiomethyl--D-galactoside (TMG). TMG is a nonmetabolizable (it is not broken down) analog of lactose. It binds to the lac repressor allowing transcription of the lac operon. In part II, because it is technically difficult to measure increased synthesis of the lac operon mRNAs, induction was indirectly assessed by measuring the enzymatic activity of one of the proteins that will be produced from the mRNAs synthesized following induction of the lac operon. Specifically, the activity of -galactosidase was measured. This enzyme normally hydrolyzes lactose (milk sugar) to glucose and galactose: lactose + H2O -galactosidase > glucose + galactose Following induction, a colorimetric assay was used to determine -galactosidase activity. Instead of using lactose as the substrate, o-NPG (o-nitrophenylgalactoside) was used. o-NPG is a colorless substrate analog and is useful because it turns yellow when it is hydrolyzed. This provides us with a simple spectrophotometric assay of -galactosidase activity. It is important to note that TMG acts as an inducer of the lac operon, but it is not a substrate for galactosidase. On the other hand, o-NPG does not function as an inducer of the operon, but can serve as a substrate for galactosidase. Data from the experiment is shown below. Time in min 0 10 20 40 60 No TMG 1.5625E-11 2.5E-11 1.77083E-11 1.14583E-11 2.8125E-11 Enzyme Activity TMG 6.35417E-11 7.08333E-11 1.60417E-10 5.58333E-10 7.42708E-10 TMG + GLC 2.70833E-11 1.875E-11 1.45833E-11 1.35417E-11 2.08333E-11 Lab Report: Each team will turn in one lab report that will consist of a computer-generated graph that accurately portrays the data above, and that answers the questions below. Generating a graph Use Microsoft Excel (or your favorite graphing program) to generate a scatter graph that uses “time after addition of TMG (min)” on the x-axis and “units of enzyme activity per cell (micromoles of o-nitrophenol produced per cell per minute)” on the Y-axis. On the same graph, plot the results for the uninduced cultures (No TMG), the induced (TMG) and induced in the presence of glucose (TMG+Glu). Questions 1. What is the natural substrate and inducer of the lac operon? 2. Why is it preferable to use TMG rather than lactose as the inducer? 3. Why is o-NPG a better substrate than the natural substrate? 4. What are the 2 transcription factors that regulate the lac operon? Which one is the repressor and which one is the activator? 5. What happens over time in the culture that was induced with TMG? 6. Whap happens to gene expression from the lac operon in the presence of TMG and glucose?