Wiley Plus Assignment 9 When GTP is bound to G proteins (alpha subunit) the complex is active . Heterotrimeric G-proteins work through ligand binding to a receptor activates the G-protein, by allowing GTP to exchange for GDP at the α subunit, while the β and γ subunits dissociate. cAMP functions as a second messenger because cAMP is produced by adenylate cyclase in response to G-protein activation, it activates many enzymes through cAMP-dependent protein kinase, and it is eliminated through cAMP phosphodiesterase. Receptors have a ligand binding site on the extracellular side of the membrane. Addition of a substance which inhibits adenylate cyclase would diminish a hormone signal mediated via a G protein signal transduction system. A Protein is never a second messenger! The following statements are true of receptors: Receptors are integral membrane proteins with a portion of their structure exposed outside the lipid bilayer on both sides of the membrane. Upon binding the first messenger, receptors undergo a conformational change Receptors bind the first messenger at a specific binding site on the extracellular side of the cell membrane. In a G protein signal-transduction system, the G protein transmits the signal from the receptor to other components of the signaling system. In G protein signal transduction systems cAMP is a second messenger. Proteins that bind molecules and elicit a response are called receptors. The advantages of protein phosphorylation as a signaling event are: Phosphorylation is rapid and specific. Phosphorylation is enzymatically reversible. Phosphorylation can be amplified by cascade systems. Phospholipase C cleaves PIP2, generating IP3 and DAG (inositol-1,4,5-trisphosphate and 1,2diacylglycerol). The interaction of various signaling pathways is called crosstalk. Insulin binds a receptor that possesses tyrosine kinase activity. Protein kinases are involved in the phosphorylation of a wide variety of proteins. Wiley Plus Assignment #10 Two molecules of glyceraldehyde-3-phosphate are converted to pyruvate for every molecule of glucose that enters Stage I of glycolysis. The glycolytic pathway must be supplied with its primary oxidizing agent, NAD. Energy investment in the first stage of glycolysis requires glucose to be phosphorylated and cleaved to yield two molecules. In anaerobic glycolysis, alcoholic fermentation in yeast and homolactic fermentation in muscle serve to regenerate NAD . It is under anaerobic conditions that pyruvate must be converted to a reduced end product in order to reoxidize the NADH produced by the glyceraldehyde-3-phosphate dehydrogenase reaction. Enzymes that operate far from equilibrium are potential control points. Red blood cells convert pyruvate to lactate even under aerobic conditions. Oxidation of NADH is not involved in the reactions of glycolysis between glyceraldehyde-3-phosphate and 3-phosphoglycerate. 1,3-Bisphosphoglycerate is a high-energy intermediate produced in glycolysis: 1,3 BPG contains an acyl phosphate bond, which has a free energy of hydrolysis greater than that of a phosphoanhydride bond. Phosphofructokinase-1 catalyzes a regulated step in glycolysis and is affected by insulin. Insulin exerts its effect indirectly, via PFK-2 and the production of fructose-2,6-bisphosphate. Pyruvate has several metabolic fates depending on the cell, under aerobic or anaerobic conditions. Reduction to lactate is a metabolic fate for pyruvate. Under anaerobic conditions in muscle cells, the reduction of pyruvate to lactate regenerates NAD+, which is necessary for glycolysis to continue. If pyruvate could not be converted to lactate in muscle cells during strenuous exercise glycolysis would stop. Gluconeogenesis is likely to occur when cellular ATP levels are high. Leucine is degraded to acetyl-CoA which cannot be used to produce glucose. It is NOT a substrate for the synthesis of glucose via gluconeogenesis. NADH must be re-oxidized to NAD+ if glycolysis is to continue. Under "normal" aerobic conditions, when oxygen is available, re-oxidation of NADH occurs via the electron transport chain. Under anaerobic conditions, however, the NAD+ is regenerated by reactions in which pyruvate is a substrate. Fructose-2,6-bisphosphate is an allosteric inhibitor of fructose-1,6-bisphosphatase. Glyceraldehyde-3-phosphate dehydrogenase also plays a role in gluconeogenesis. Phosphofructokinase-1 catalyzes a regulated step in glycolysis and is affected by insulin. The biochemical purpose for the production of lactate in muscle cells is that it is produced to reoxidize cytoplasmic NADH under anaerobic conditions. The primary purpose of gluconeogenesis in the liver is o produce glucose for its release into the circulation to help maintain constant blood glucose levels. One product of glycolysis under aerobic or anaerobic conditions is ATP. Glucose is converted to lactate in skeletal muscle under anaerobic conditions. The enzymes that catalyze glycolysis are located in the cytosol. Glucose can be synthesized from noncarbohydrate precursors by gluconeogenesis. The citric acid cycle considered to be part of aerobic metabolism even though oxygen does not explicitly appear in any reaction because it produces reduced electron carriers, which are re-oxidized by transferring their electrons ultimately to oxygen. NADH and FADH2 produced by the citric acid cycle can only be re-oxidized via the electron transport chain, and this ultimately passes the electrons to O2 The consumption of acetyl-CoA by the citric acid cycle is DECREASED when the mitochondrial ATP synthase is inactive. The ubiquitous chemistry of acetyl-CoA is centered on its high-energy Thioester bond. In the mitochondrial matrix, eukaryotes house the enzymes of the citric acid cycle. It is important for recovery of energy from several metabolic fuels that are broken down to acetyl-CoA. This best describes the citric acid cycle as a central pathway of metabolism. The major pathways for fuel metabolism in mammals converge on the molecules pyruvate and acetylCoA. The following are true of glycogen: The first step in glycogen synthesis is catalyzed by hexokinase. Glucose is stored as a polymer to reduce its chemical reactivity. Branching enables more rapid breakdown of glycogen. The part labeled D will not proceed in the absence of NAD+. NAD+ is required by glyceraldehyde-3-phosphate dehydrogenase for the oxidation of glyceraldehyde3-phosphate. The parts labeled D, E, and H are “energy capture” steps. The curves that best represent the behaviour of pyruvate kinase in i) the absence, and ii) the presence of ADP are Absence = 4, and presence = 3