The Total Synthesis of Mitomycins

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The Total Synthesis of Mitomycins
Bob Moreau
Organic Supergroup
April 25, 2007
O
OCONH2
X
OMe
N
Me
NH
O
Mitomycin A X = OMe
Mitomycin C X = NH2
Mitomycin A was isolated from the culture broth of Streptomyces caesipitosus in
1956 and mitomycin C in 1958.
Their gross structures as well as their relative and absolute stereochemistries were
determined by X-ray crystallographic analysis in an effort that took about 20 years.
These mitomycins are active against Gram-positive and Gram-negative bacteria, and
also show broad activity against tumor cells.
Mitomycin C has proven to be more potent and is a widely prescribed antitumor agent.
These molecules exert their powerful biological activity by crosslinking DNA strands.
Mechanism of Action
O
H2N
OMe
reduction
NH
N
Me
O
OCONH2
H2N
OMe
N
Me
O
OCONH2
NH
-MeOH
H2N
NH
N
Me
O(H)
O(H)
O
OCONH2
Mitomycin C
alkylation
of ds DNA
O
H2N
DNA
N
Me
O
O
DNA
oxidation
H2N
DNA
OCONH2
DNA
crosslinking H2N
O
O(H)
NH2
DNA
DNA
N
Me
NH2
DNA
N
Me
O(H)
NH2
Tomasz, M.; Lipman, R.; Chowdary, D.; Pawlak, J.; Verdine, G. L.; Nakanishi, K. Science 1987, 235, 1204.
Covalent Crosslink Adduct
Molecular model of the Mitomycin C/DNA crosslinked complex showing the mitosene unit snugly
fit into the minor grove. Based on this model, the mitosene unit protrudes less than 1 Å beyond
the edges of the DNA backbone
Tomasz, M.; Lipman, R.; Chowdary, D.; Pawlak, J.; Verdine, G. L.; Nakanishi, K. Science 1987, 235, 1204.
Mitomycinoid Structures
O
X
OMe
N
Me
O
OCONH2
NH
MeO
O
OMe
N
NMe
O
Mitomycin F X = OMe
Porfiromycin X = NH2
N
O
O
Isomitomycin A
O
OCONH2
X
X
OH
N
Me
OMe
NH
MeO
Me
N
OCONH2
O
Albomitomycin A
OCONH2
X
Me
N
O
Mitomycin A X = OMe
Mitomycin C X = NH2
H
OMe
Me
O
OCONH2
NMe
O
Mitomycin B X = OMe
Mitomycin D X = NH2
OR
N
Me
NMe
O
Mitomycin G X = NH2, R = Me
Mitomycin H X = OMe, R = H
Mitomycin K X = OMe, R = Me
“The complexity of the problem arises from
the need to accommodate highly interactive
functionality in a rather compact matrix and to
orchestrate the chemical progression such as
to expose and maintain vulnerable structural
elements as the synthesis unfolds. The
synthesis of a mitomycin is the chemical
equivalent of walking on egg shells.”
Danishefsky, S. J.; Scheryantz, J. M. Synlett. 1995, 475.
The Kishi Lab Approach
O
OCONH2
MeO
OMe
N
Me
O
MeO
O
MeO
OCONH2
X
OMe
NH
NH
Me
O
OCONH2
O Me
HN
NH
Me
O
HN
O
Mitomycin A
OP
PO
MeO
MeO
PO
MeO
X
OMe
NH
Me
OMe
Me
Me
PO
PO
NH2
Kishi’s Model System
O
MeO
OMe
MeO
Me
Me
O
HN
PO
Me
OMe
MeO
MeO
Me
Me
PO
HN
O
O
MeO
OMe
MeO
N
Me
X
O
O Me
O
PO
X
PO
NH2
OMe
Synthesis of a Key Aromatic Intermediate
Cl
MeO
Cl
MeO
TiCl4
Me
MeO
CH2Cl2, 0 °C
O
H
O
mCPBA
MeO
H
O
MeO
CH2Cl2, 0 °C
Me
Me
MeO
MeO
NaOMe
MeOH, 0 °C
98%, 3 steps
OH
O
MeO
MeO
PhNMe2, reflux
Me
MeO
96%, 2 steps
K2CO3
acetone, reflux
Me
MeO
OH
Br
MeO
Me
MeO
Synthesis of a Key Aromatic Intermediate
OH
O
MeO
HNO3
MeO
Me
AcOH
Me
OMe
OH
MeO
Zn
AcOH, 0 °C
Me
O
OH
BnBr, K2CO3
DME/DMF
reflux
67%, 3 steps
OBn
1. LDA, CH3CN
CN
MeO
-30 °C
MeO
O
Me
OBn
NH
OBn
Ph
O
OBn
OH
MeO
O
2. CrO3, H2SO4
aq. acetone
71%, 2 steps
MeOH/dioxane
Me
OBn
77%
Me
OBn
Medium Ring Formation
OBn
OBn
MeO
CN
MeOH, H+
O
Me
MeO
LAH
Me
OBn
OMe
OMe
OBn
OMe
OMe
OBn
NH2
MeO
Me
NC
OBn
H2, Pd/C
MeOH
OMe
OMe
O
MeO
Me
HN
O
40-50%, overall
O
MeO
OMe
OMe
O2
MeOH
Me
O
NH2
OH
OMe
OMe
OH
NH2
MeO
Me
Transannular Cyclizations
OMe
OMe
O
MeO
Me
H+ in MeOH,
SiO2, or heat
O
O
MeO
OMe
N
Me
HN
O
BF3.OEt2
MeSH, -45 °C
SMe
OMe
O
MeO
Me
HN
O
O
HgCl2, Et3N
CH2Cl2
N
Me
O
O
MeO
MeO
OMe
N
Me
O
Transannular Cyclizations
OMe
OMe
O
MeO
Me
H+ in MeOH,
SiO2, or heat
O
O
MeO
OMe
N
Me
HN
O
BF3.OEt2
MeSH, -45 °C
SMe
OMe
O
MeO
Me
HN
O
O
HgCl2, Et3N
CH2Cl2
N
Me
O
O
MeO
MeO
OMe
N
Me
O
Ketal Formation Problems
OBn
MeO
CN
O
Me
1. H2CO, NaOMe
MeOH, 0 °C
69%
(2. BnBr)
BnO
OR
MeO
CN
O
Me
OBn
BnO
ketal
formation
BnO
OH
MeO
CN
MeO OMe
Me
BnO
this compound was
obtained in only very
low yield
1. BH3
xylene
reflux
2. H2O2
BnO
MeO
CN
MeO OMe
Me
BnO
A Solution to the Ketal Formation Problems
1. H2CO, NaOMe
BnO
MeOH, 0 °C
CN
MeO
69%
OBn
MeO
O
Me
2. Ac2O
BnO
OAc
SMe
.
CN BF3 2AcOH MeO
O
Me
OBn
OAc
NH
MeS SMe
MeSH, -30 °C Me
BnO
BnO
Et3N, MeOH
71% overall
BnO
OBn
MeO
BnO
CN
MeO OMe
Me
BnO
OBn
1. NaOMe
CN MeOH/CH2Cl2MeO
HgCl2, Et3N MeO
MeOH/THF
85%, 3 steps
MeS SMe
Me
BnO
2. BnBr, KH
DMF
BnO
OAc
CN
MeS SMe
Me
BnO
Sidechain Functionalization
BnO
OBn
MeO
MeO OMe
Me
BnO
1. LDA; PhSeBr
CN THF, -78 °C MeO
2. 30% H2O2
EtOAc/THF
OBn
BnO
CN
MeO OMe
Me
BnO
DIBAL
CH2Cl2, 0 °C
OBn
MeO
H
O
MeO OMe
Me
BnO
BnO
1. NaBH4
MeOH
CH2Cl2, 0 °C
2. Ac2O, py
this reaction took over a
week to go to completion
BnO
MeO
OBn
OMe
OMe
OH
OH
Me
BnO
OAc
BnO
+
MeO
OBn
OMe
OMe
OH
OH
Me
BnO
OAc
66% overall
BnO
3 eq. OsO4
py/THF
87%
OBn
MeO
OAc
MeO OMe
Me
BnO
Installation of the Aziridine
BnO
MeO
OBn
OMe
OMe
OH
BnO
+
OH
Me
BnO
MeO
OBn
OMe
OMe
steps
OH
OH
Me
BnO
OAc
BnO
MeO
OBn
OMe
OMe
O
56% or 93%
Me
BnO
OAc
OH
1. LiN3,
DMF
150 °C
2. Ms2O, py
BnO
MeO
OBn
OMe
OMe
1. P(OMe)3
reflux
N P(OMe)2
Me
O
BnO
NBn2
2. NaH, THF
81%, 2 steps
BnO
MeO
OBn
OMe
OMe
OMs
N3
Me
BnO
NBn2
1. BnNH2
150 °C
2. BnBr, K2CO3
acetone
reflux
51% overall
BnO
MeO
OBn
OMe
OMe
OMs
N3
Me
BnO
OMs
Advanced Medium Ring Formation
BnO
MeO
OBn
OMe
OMe
BnO
LAH
N P(OMe)2
O
Me
BnO
MeO
Et2O, 0 °C
NH
Me
BnO
90%
NBn2
OBn
OMe
OMe
BnO
MeI, K2CO3
acetone, reflux
MeO
OBn
OMe
OMe
NMe
Me
BnO
NBn2
NBn2
H2, Pd/C
AcOH
OMe
OMe
O
MeO
NMe
Me
HN
O
OH
OH
OH
OMe
OMe
O
+
MeO
NMe
Me
OH
O2
MeOH
HN
O
32%, 3 steps
MeO
OMe
OMe
NMe
Me
OH
NH2
Reactivity of the Advanced Medium Ring
OH
OH
OMe
OMe
O
MeO
NMe
Me
OMe
OMe
O
MeO
+
NMe
Me
HN
O
O
aq. HCl
MeOH
OH
MeO
N
Me
HN
NMe
O
O
O
Cl
OPh
py, 0 °C
O
MeO
OCO2Ph
OMe
OMe
NMe
Me
HN
O
O
+
MeO
OCO2Ph
OMe
OMe
NMe
Me
HN
O
O
MeO
CH2Cl2
OPh
OMe
OMe
NMe
Me
HN
O
Reactivity of the Advanced Medium Ring
OH
OH
OMe
OMe
O
MeO
NMe
Me
OMe
OMe
O
MeO
+
NMe
Me
HN
O
O
aq. HCl
MeOH
OH
MeO
N
Me
HN
NMe
O
O
O
Cl
OPh
py, 0 °C
O
MeO
OCO2Ph
OMe
OMe
NMe
Me
HN
O
O
+
MeO
OCO2Ph
OMe
OMe
NMe
Me
HN
O
O
MeO
CH2Cl2
OPh
OMe
OMe
NMe
Me
HN
O
Failed Conditions from the Model System
OH
OMe
OMe
O
MeO
NMe
Me
O
HBF4
MeO
CH2Cl2
OMe
x
OMe
N
Me
O
90%
OCOCl
COCl2, PhNMe2 MeO
NMe CH2Cl2/PhCH3
N
Me
HN
O
O
OH
NMe
O
NH3
CH2Cl2
PhCH3
0 °C
BF3.OEt2
MeSH, -45 °C
85%
OH
SMe
OMe
O
MeO
NMe
Me
HN
O
O
H2N
OMe
N
Me
O
OCONH2
O
Porfiromycin
NMe
NH3
MeOH
OCONH2
MeO
OMe
N
Me
O
NMe
Completion of Porfiromycin
OH
OMe
OMe
O
MeO
NMe
Me
O
HBF4
MeO
CH2Cl2
OMe
x
OMe
N
Me
O
90%
OCOCl
COCl2, PhNMe2 MeO
NMe CH2Cl2/PhCH3
N
Me
HN
O
O
OH
NMe
O
NH3
CH2Cl2
PhCH3
0 °C
BF3.OEt2
MeSH, -45 °C
85%
OH
SMe
OMe
O
MeO
NMe
Me
HN
O
O
H2N
OMe
N
Me
O
OCONH2
O
Porfiromycin
NMe
NH3
MeOH
OCONH2
MeO
OMe
N
Me
O
NMe
Completion of Mitomycin A
BnO
MeO
OBn
OMe
OMe
NH
Me
BnO
NBn2
1. acrolein
CH2Cl2
2. BH3
THF/CH2Cl2
-78 °C to rt
3. Ac2O, py
BnO
MeO
OBn
OMe
OMe
NP
Me
BnO
78%
NBn2
OH
1. H2, Pd/C
AcOH
2. O2, MeOH
OMe
OMe
O
MeO
NP
Me
42%
HN
O
HBF4
CH2Cl2
P = (CH2)3OAc
77%
1. NaOMe
MeOH/CH2Cl2
OCONH2
2. DMSO, DCC
OMe
TFA/py
O
MeO
N
Me
NH
O
Mitomycin A
O
MeO
3. HClO4, PhNMe2 Me
CH2Cl2
35%
OCONH2
OMe
N
O
NP
1. COCl2, PhNMe2
MeO
CH2Cl2
2. NH3
CH2Cl2, 0 °C
O
OH
OMe
N
Me
O
85%
Nakatsubo, F.; Fukuyama, T.; Kishi, Y. J. Am. Chem. Soc. 1977, 99, 8116.
Fukuyama, T.; Nakatsubo, F.; Cocuzza, A. J.; Kishi, Y Tetrahedron Lett. 1977, 49, 4295.
Kishi, Y. J. Nat. Prod. 1979, 42, 549.
NP
The Fukuyama Lab Approach
O
O
OCONH2
H2N
OMe
N
Me
MeO
NH
O
MeO
OCONH2
H
OMe
NH
N
O
Mitomycin C
H
OMe
Me
O
OCONH2
Me
N
N
O
Albomitomycin A
Isomitomycin A
Ph
MeO
BnO
MeO
OTMS
SEt
O
O
H
Me
MeO
Me
N3
MeO
Ph
BnO
MeO
Me
OTMS
SEt
O
O
H
N
MeO
Intramolecular [3 +2] Cycloaddition
Ph
MeO
13 steps
Me
BnO
EtS
Ph
O
OTMS
O
MeO
MeO
64% overall
MeO
BnO
Me
N3
MeO
SnCl4
CH2Cl2, -78 °C;
then py
OTMS
SEt
O
O
H
Me
N3
MeO
95%, >20:1 dr
stereoselectivity
likely due to an
endo Diels-Alder
toluene
110 °C
Ph
BnO
MeO
Me
OTMS
SEt
O
O
H
N
MeO
Ph
BnO
MeO
OTMS
SEt
O
O
H
86%
extrusion
of N2
Me
N
MeO
H
N
N
a triazoline
Hydroxymethylene Installation
Ph
BnO
MeO
OTMS
SEt
O
O
H
Me
Ph
N
1. DIBAL
THF, -78 °C
BnO
MeO
2. Ac2O, py
99%, 2 steps
MeO
OTMS
SEt
O
OAc
H
Me
N
MeO
RuO2, NaIO4
1:1 EtOAc/H2O
84%
O
O
BnO
MeO
N
H
SO2Et
O
H
O
CCl3
OAc
Me
N
MeO
1. NaBH4, MeOH
97%
2. O
Me
.
CH2Cl2
MeO
O
H
SO2Et
O
Ozonolysis gave
a complex mixture
OAc
O
N
BnO
H
CCl3
N
MeO
Unveiling the Pyrrolidine
O
O
O
O
BnO
MeO
N
H
SO2Et
O
H
CCl3
O
NH3
O
MeO
NH2
H
O
H
MeOH, rt
O
Me
BnO
N
Me
:NH3
MeO
O
N
MeO
NH3, -H2O
O
O
BnO
MeO
H
O
NH2
NaBH4
OH
NH
Me
N
MeO
O
BnO
MeO
H
OH
NH
61% overall
the bridgehead
hemiaminal resisted
reduction by NaBH4
NH2
OMe
Me
N
MeO
Completion of Isomitomycin A
BnO
MeO
OCONH2
H
OH
NH
Me
BnO
CSA
MeOH, rt
N
MeO
OCONH2
H
Me
MeO
H
N
N
MeO
60%
O
MeO
Me
OCONH2
H
OMe
NH
N
1. H2 (1 atm)
10% Pd/C
EtOH
2. DDQ, H2O
acetone
-78 °C
O
Isomitomycin A
BnO
MeO
Me
H
OMe
NH
N
MeO
77%, 2 steps
OCONH2
Completion of Mitomycin C
O
MeO
Me
OCONH2
H
OMe
NH
O
NH3
MeOH, rt
N
O
H2N
OCONH2
H
Me
OMe
NH
N
O
85%
Al(OiPr)3
MeOH, rt
Michael addition
91%
O
H2N
OMe
N
Me
O
OCONH2
O
NH
-elimination
H2N
OCONH2
H
OMe
N
Me
O
N
Mitomycin C
Fukuyama, T.; Yang, L. J. Am. Chem. Soc. 1987, 109, 7881.
Fukuyama, T.; Yang, L. J. Am. Chem. Soc. 1989, 111, 8303.
Completion of Mitomycin A
O
MeO
Me
OCONH2
H
OMe
NH
O
NH3
MeOH, rt
N
O
H2N
OCONH2
H
Me
OMe
NH
N
O
85%
Al(OiPr)3
MeOH, rt
Michael addition
91%
O
MeO
OMe
N
Me
O
OCONH2
O
NH
-elimination
H2N
OCONH2
H
OMe
N
Me
O
N
Mitomycin A
Fukuyama, T.; Yang, L. J. Am. Chem. Soc. 1987, 109, 7881.
Fukuyama, T.; Yang, L. J. Am. Chem. Soc. 1989, 111, 8303.
Danishefsky’s Approach to FR-900482
OCONH2
OH
MeO
OH
H
N
O
MeO
NH
N
O
MeO
internal
Heck arylation
OMe
NR
MeO
O
O
OMe
I
N
NR
O
O
FR-900482
MeO
OMe
I
O
MeO
N
O
+
intermolecular
hetero
Diels-Alder
OH
MeO
OMe
I
HO
MeO
N
O
O
An Intramolecular Approach to FR-900482
OCONH2
OH
MeO
O
MeO
O
N
OMe
OMe
OH
H
O
MeO
NH
O
N
MeO
O
O
N
O
O
bridged mode
FR-900482
x
MeO HO
OMe
MeO
O
OMe
MeO
O
h366 nm
MeO
NO2
O
MeOH
OMe
MeO
N
O
O
MeO
O
N
O
fused mode
Inspiration for a Mitomycin Synthesis
OCONH2
OH
MeO
O
MeO
O
N
OMe
OMe
OH
H
O
MeO
NH
O
N
MeO
O
O
N
O
O
bridged mode
FR-900482
x
MeO HO
OMe
MeO
O
OMe
MeO
O
h366 nm
MeO
NO2
O
MeOH
OMe
MeO
N
O
O
MeO
O
N
O
fused mode
The Danishefsky Lab Approach
O
MeO
MeO
MeO
OMe
N
Me
NMe
N
O
MeO
OMe
Me
O
MeO
O
NMe
OMe
N
Me
MeO
MeO
O
Mitomycin K
MeO HO
MeO
MeO
Me
MeO
Me
NO2
MeO
OMe
intramolecular
hetero
Diels-Alder
MeO
O
MeO
OMe
Me
MeO
N
O
Hetero Diels-Alder
OMe
MeO
MeO
steps
Me
MeO
Li
O
MeO
MeO HO
MeO
H
Me
OMe
THF, -78 °C
NO2
MeO
Me
NO2
MeO
80%
h, 350 nm
MeOH
h
MeO
O
MeO
MeO
OMe
N
Me
MeO
HO
45%
O
MeO
OMe
+
Me
MeO
15%
N
O
A Sequential Photolytic Redox Mechanism
MeO
h350 nm
Me
NO2
OMe
MeO HO
OMe
MeO HO
MeOH
MeO
N
MeO
MeO
1,5 H abstr.
H
Me
MeO
O
-H2O
OMe
O
MeO
N
Me
O
MeO
O
[4 + 2]
MeO
MeO
O
MeO
OMe
N
Me
MeO
1,5 H abstr.
MeO
OMe
Me
MeO
HO
O
MeO
N
O
h
MeO
OMe
Me
H
O
MeO
N
O
Aziridine Fragmentation
MeO
MeO
O
MeO
OMe
N
Me
MeO
OMe
PDC
CH2Cl2
N
Me
MeO
MeO
O
N
Me
MeO
85%
O
65%
BnN3
PhH, 80 °C
MeO
HO
O
MeO
OMe Bn
N
N
N
O
1. h, 254 nm
76%
2. L-Selectride
THF, -78 °C
81%
MeO
MeO
MeO
O
MeO
OMe
NHBn
N
Me
MeO
AIBN
Bu3SnH
PhH, 80 °C
S
O
OMe
Im
MeO
Im
O
MeO
N
Me
NBn
CH2Cl2
MeO
S
S
Im
OMe
DMAP
N
Me
MeO
66%
HO
NBn
Synthesis of a Deoxygenation Precursor
MeO
MeO
O
MeO
OMe
N
Me
MeO
O
MeO
OMe
PDC
PhS
N3
MeO
SPh
OMe
N
N
Me
CH2Cl2
MeO
PhH, 80 °C
N
Me
MeO
HO
O
N
N
MeO
O
65%
O
90%
L-Selectride
THF, -78 °C
77%
MeO
S
O
MeO
SPh
OMe
N
N
N
MeO
O
S
Im
MeO
Im
O
MeO
N
Me
Im
DMAP
CH2Cl2, 35 °C
N
N
Me
MeO
65%
SPh
OMe
N
N
HO
A Successful Deoxygenation
MeO
O
MeO
SPh
OMe
N
N
Me
MeO
N
N
O
Im
MeO
AIBN
Bu3SnH
MeO
PhH, 80 °C
MeO
O
SPh
OMe
N
N
MeO
S
13%
h, 254 nm
PhH
extrusion of N2
48%
MeO
MeO
O
MeO
OMe
N
Me
MeO
N
Me
N
MeO
52%
OMe
NH2
+
N
Me
O
MeO
Raney Ni
NMe acetone, 60 °C
70%
O
MeO
OMe
N
Me
MeO
N
SPh
Completion of Mitomycin K
MeO
TMS
O
MeO
OMe
N
Me
NMe
MeO
TMS
MeO
Li
THF, -10 °C
N
Me
90%
NMe
MeO
O
NaOAc
MeCN/H2O
N
O
O Ag O
8-16%
TMS
O
O
MeO
OMe
N
Me
OH
OMe
MeO
O
NMe
PPTS
CH2Cl2
81%
OH
OMe
MeO
N
Me
NMe
O
Mitomycin K
Benbow, J. W.; Schulte, G. K.; Danishefsky, S. J. Angew. Chem. Int. Ed. Engl. 1992, 31, 915.
Benbow, J. W.; McClure, K. F.; Danishefsky, S. J. J. Am. Chem. Soc. 1993, 115, 12305.
Danishefsky, S. J.; Scheryantz, J. M. Synlett. 1995, 475.
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