DNA Replication The Structure of DNA What we know… Double helix Each nucleotide is made up of: Deoxyribose (sugar) phosphate group base The Structure of DNA Base-Pairing Rules (Chargaff) DNA strands are antiparallel *Know experiments: Griffith, HersheyChase Models of replication 1.Conservative Two parental strands came back together after replication 2.Semi-conservative One new and one old strand in a newly synthesized double stranded DNA 3.Dispersive All 4 strands post-replication have a mixture of old and new DNA Meselsohn and Stahl labeled the old strand with N15 (heavy). New strands will have N14. Centrifugation after replication supports the semi-conservative model. Semi-Conservative Replication Each new DNA molecule has one old strand and one new strand DNA Replication… how it works Occurs in the nucleus A new and identical molecule of DNA is made, using the old one as a template DNA Replication origin of replication begins at the a special sequence of DNA 2 strands are separated by helicase, forming a replication bubble Replication fork is formed at each end of the replication bubble DNA Replication At replication fork, nucleotides “line up” with their complementary mates DNA polymerase III attaches the nucleotides to the exposed bases of the DNA strand DNA Replication: A Summary http://www.youtube.com/watch?v=OnuspQ G0Jd0 (bioflix) https://www.youtube.com/watch?v=27TxK oFU2Nw (3d medical) Leading Strand DNA polymerase can only add nucleotides to the 3’ end of a DNA strand In the leading strand, DNA polymerase III follows the replication fork Lagging Strand DNA polymerase works in the opposite direction of the replication fork Short segments of DNA are made Okazaki fragments Okazaki fragments are joined by DNA ligase DNA Proofreading DNA polymerase I proofreads each nucleotide as it is added to the DNA strand If there’s a mistake… it backs up removes the wrong nucleotide adds the right nucleotide Enzymes & Their Job in Replication Helicases- unwind the DNA strand Primase- inserts RNA primer to begin replication process. DNA Polymerase III- adds complementary bases to 3’ end of primer or new DNA strand. DNA Polymerase I- removes RNA primer & inserts DNA nucleotides. (also proofreads) DNA Ligase- “sews” Okasaki fragments of lagging strand together with covalent bonds.