B.6.E Identify and Illustrate changes in DNA and evaluate the significance of these changes ! Learning About DNA DNA damage from environmental agents such as ultraviolet light (SUNSHINE), nuclear radiation or certain chemicals. Our cells have built in mechanisms that catch and repair most of the changes that occur during DNA replication or from environmental damage. As we age, however, our DNA repair does not work effectively and we accumulate changes in our DNA. Still Learning About DNA Some of these changes occur in body cells such as in skin cells as a result of sun exposure, but are not passed on to children ! BUT other errors can occur in the DNA of cells that produce the egg and SPERM. These are called germ line mutations and can be passed from parent to child. If a child inherits a germ line mutation from their parents, every cell in their body will have this error in their DNA. Germ line mutations are what cause diseases to run in families, and responsible for some hereditary diseases What Kind of Mutations Are There When DNA Replicates? • A gene is essentially a sentence made up of the bases A, T, G, and C that describe how to make a protein. Any changes to those instructions can alter the gene’s meaning and change the protein that is made, or how or when a cell makes a protein. Point Mutation A point mutation is a sample change in one base of a gene sequence. This is equivalent to change in one letter in a sentence, such as this example, where we change the ‘C’ in cat to ‘H’ : Original The fat cat ate the wee rat. Point Mutation The fat hat ate the wee rat. Frame-shift Mutation • In a frame shift mutation, one or more bases are inserted or deleted, the equivalent of adding or removing letters in a sentence. But because our cells read DNA in three letter “ Words ,“ adding or removing one letter changes each subsequence word. This type of mutation can make the DNA meaningless and often results in a shortened protein. Insertion Original the fat cat ate the wee rat. Insertion the fat cat xlw ate the wee rat. Protein that is supposed to be made by the cell will not be made. Deletion • Mutations that result in missing DNA are called deletions. These can be small, such as the removal of just one “word”, or longer deletions that affect a large number to genes on the chromosome. Original The fat cat ate the wee rat. Deletion The fat ate the wee rat. Genetic Variety in Species • occasionally a mutation can improve an organism’s chance of surviving and passing the beneficial change on to it’s descendants. The Gene Associated with Sickle Cell Anemia is caused by a single base change, a substitution of Thymine for adenine in the DNA. Causes the mucus in the lungs and digestive system to be very thick (viscous) instead of watery. This thick mucus to builds up in the lungs and block the absorption of oxygen. It also blocks some of the digestive enzymes from getting to the intestines. A patient suffers from the lack of oxygen and malnutrition. However they are immune to Malaria. A benefit! Number 61 1) Mutations can be considered as one of the raw materials of evolution because they A-contribute to new variations in organisms B-are usually related to the environment in which they appear C-are usually beneficial to the organism in which they appear D-usually cause species of organisms to become extinct Number 62 ATCAGCGCTGGC The above sequence of DNA is part of a gene. How many amino acids are coded for by this segment? A B C D 4 8 12 20 Number 63 Which of these would most likely cause a mutation? A the placement of ribosomes on the endoplasmic reticulum. B the insertion of a nucleotide into DNA C the movement of transfer RNA out of the nucleus D the release of messenger RNA from DNA 64 65 A mutation that occurs in the gametes of an organism will most likely be transferred to which of the following? A The siblings of the organism B The offspring of the organism C The other organisms living nearby D The mating partner of the organism B.6.F Predict possible outcome of various genetic combinations such as monohybrid crosses, dihybrid crosses and Non Mendelian inheritance GREGOR JOHANN MENDEL • 1822 – 1884 • Father of genetics • Augustinian monk • • • • • Austria, now Czech Republic Studied inheritance in garden peas Video Law of Segregation • Each individual has a pair of factors (alleles) for each trait. Dominant/Recessive • The factors (alleles) segregate (separate) during gamete (sperm & egg) formation • Each gamete contains only one factor (allele) from each pair • Fertilization gives the offspring two factors for each trait one from each parent MENDEL’S EXPERIMENTS Modern Genetics View • Each trait in a pea plant is controlled by two alleles (alternate forms of a gene) • Dominant allele (capital letter) masks the expression of the recessive allele (lowercase) • Homozygous=identical alleles TT or tt • Heterozygous=different alleles Tt Relationship between Gene and Allele • Gene - a segment of DNA that controls a specific trait. • Allele - the alternate (or contrasting) form of a gene. Difference between Genotype and Phenotype • Genotype - genetic makeup of an organism; refers to the alleles for a trait. TT or Tt • Phenotype - physical or outward expression of the alleles for that trait. (What it looks like) Tall or short Punnett Square • A diagram used to predict the probability of certain traits by offspring. • The following examples will illustrate the outcome of different types of crosses. DIHYBRID CROSS • Mendel obtained similar results with other pairs of traits • e.g., TtYy x TtYy dihybrid cross • 9:3:3:1 ratio in F2 generation • Independent Assortment Not all the plants that were tall, also inherited the yellow trait Incomplete Dominance • In Incomplete Dominance, One allele not completely dominant over the other, so blending of the parental traits occurs. (2 alleles produce 3 phenotypes.) Result: Heterozygous phenotype somewhere in between homozygous phenotype. Examples: • Trait: Flower Color Expressions: Red x White Pink RR= Red; RW= pink; WW= white Codominance In codominance, neither allele are dominant; both are expressed. A cross between organisms with two different phenotypes produces offspring that has both phenotypes of the parental traits shown. Always spotted or striped 2. Codominance • Both alleles contribute to the phenotype. • Example: In some chickens Black Chicken x White Speckled Chicken YOU tell me which type of dominance… Codominance! Type of Dominance? Incomplete Dominance! Type of Dominance? Incomplete Dominance! Sex Linked Traits • The genes for these traits are on X chromosomes • Because only males receive one X chromosome, they are more likely to inherit disorders passed on • Examples are Hemophilia and colorblindness. 66. In a cross of a round hybrid pea with a true breeding round parent (Ww x WW), what genotypic proportions would be observed in the offspring? • A. Half heterozygous, half homozygous dominant • B. Half round, half wrinkled • C. All heterozygous • D. All round 67. A cat that was born with black spots and a white coat is an example of • • • • A. B. C. D. Codominance Incomplete Dominance Sex Linked Trait Mendel inheritance 68. Which of the following is heterozygous dominant • • • • A. B. C. D. Tt TT Tt None • 69 In cocker spaniels the allele for a black coat color (B) is dominant over the allele for a brown coat color (b). If a brown cocker spaniel is crossed with a heterozygous black cocker spaniel, which of the following genotypic ratios can be expected? • F 0 BB: 2 Bb: 2 bb • G 1 BB: 2 Bb: 1 bb • H 2 BB: 0 Bb: 2 bb • J 2 BB: 1 Bb: 0 bb 70 If several pea plants with the genotype T TYy are crossed with pea plants with the genotype Ttyy, what percentage of the offspring will be expected to have the T TYy allele combination? A 25% B 40% C 50% D 75% B.6.G Recognize the significance of meiosis to sexual reproduction Clip Meiosis in the Cell • The process results in 4 daughter cells (Count the vowels) • Daughter cells are haploid (N) ½ the number of chromosomes • Daughter cells are genetically different, provides diversity • Make sex cells (gametes) sperm and egg Crossing OverInterchanging of Chromosomes • XX=female • XY=male DNA Exchanges creating DIVERSITY Diploid VS. Haploid • Body cells that have the full set of chromosomes are DIPLOID • (46) • PERFORMS MITOSIS • Sex cells that have half a set of chromosomes are HAPLOID • (23) • PERFORMS MEIOSIS 71 Crossing-over between nonsister chromatids during meiosis is significant in heredity. This process most likely leads to an increase in which of the following? F The expression of dominant traits G Number of gametes H The occurrence of polyploidy J Genetic variation B.6.H Fingerprinting, Genetic modifications, and Chromosomal Analysis The Human Genome Project • The project identifies all the approximant genes in DNA • No two organisms have the same genome. • Developed to discover where our diseases are on chromosomes DNA Fingerprinting DNA Fingerprinting or chromosome painting • Allows us to compare the genomes of different species to compare how similar they are. Karyotyping Questions • 72. What is crossing over? • A. Exchanging of the Chromosomes • B. Dividing of the cells • C. Chromosomes are doubled • D. Walking across the street Questions • 73. How many Chromosomes are in a human diploid cell? • A. 16 • B. 26 • C. 46 • D. 69 Questions • 74. True or False this person is a female? • A. true • B. false 75 The technique known as chromosome painting is the result of scientific research. Scientists use chromosome painting to mark the locations of genes on human chromosomes with fluorescent tags. It is also possible to apply this technique to the chromosomes of many different species. Chromosome painting allows for which of the following? F A comparison of the genomes of different species G The sequencing of proteins from many species H An increase in mutations in many species J The extraction of amino acids from different species 7.4 Analyze and evaluate how evidence of common ancestry among groups is provided by the fossils record, biogeography, and homologies, including anatomical, molecular, and developmental Darwin’s theory Variation exist among individuals in a species. Individuals will compete for resources (food and space) Some competition would lead to death of some individuals while others would survive. Natural selection is the process to survive and reproduce. The favorable variations of this are called adaptations. Evolution Fossils Fossils provide the only direct evidence of history of evolution. The uppermost rock layers are our most current forms of life. Fossils from the deeper layers are the common ancestors of modern forms. Homologous structures Darwin pointed out the forelimbs of such animals as humans, whales, bats, and other creatures are strikingly similar, even though the forelimbs are used in different ways. Darwin also proposed that the similar forelimbs all relate to a common ancestor. He also observed that animals have structures they do not use. These useless organs are called vestigial organs. In humans it’s the appendix, the fused tail vertebrae, and the wisdom teeth, and muscles that move the ears and nose. Homologous Structure Analogous structures Analogous structures are structures in different organisms that look similar or perform similar functions, but are not derived from the same ancestral source. Some examples are bats wings and birds wings, through looking similar and performing similar function evolved separately. Analogous Structure Embryology Darwin noted the striking similarity among embryos of complex animals, such as humans, chickens, frogs, reptiles, and fish. Common ancestor. DNA and Amino acid comparisons The less number of amino acid differences between organisms the more closely related they are. Common ancestor. 76. Which layer of rock is the oldest? a. Red layer b. Green layer c. Yellow layer 77. Which of the following is not a key piece of evidence in finding a common ancestor? a. Fossils b. Embryology c. Similar looks d. Homologous structures 78. Which of the following is the most closely related to humans? a. The mouse b. The gorilla c. The frog d. The lamprey Species Gorilla Rhesus Monkey Mouse Chicken Frog Lamprey Amino Acid Differences from Human Hemoglobin Protein 1 8 27 45 67 125 79. 80. Analyze and evaluate how natural selection produces change in populations, not individuals Natural Selection Overproduction Species produce more young than will survive to reproduce age (Ex. Cats have huge litters) Variation Individuals vary from one another in many characteristics (even siblings differ) “Oh Deer Game” Competition There is competition among offspring for resources Natural Selection Survival of the Fittest Phenotype The individuals best suited to there environment will survive and pass on their traits Favorable Combinations Increase Population will change to all favorable traits Population Variations. Which will be eaten first? Population trait of beak size and shape shifted due to the type of food sources available. Gene Flow and Genetic Drift Can be caused by land barriers Migration Mutations Sexual Reproduction ALL INCREAS GENETIC DIVERSITY Video on Gene Flow 81. 82 After examining the fossil record, scientists have determined that scorpions today are much smaller than their extinct ancestors. For example, Jaekelopterus rhenaniae, a giant scorpion species that lived 255 million to 460 million years ago, was 2.5 meters long. Which of the following conclusions is supported by this information? F Scorpions living today have increased their numbers since they first appeared. G Scorpions in the fossil record are smaller than their descendants are. H Scorpions have changed as a result of natural selection. J Scorpions do not appear in their original state in the fossil record. 83 The concept of gene flow is demonstrated when a cow is driven off from its herd, joins another herd, and reproduces. When the cow contributes to the gene pool of the new herd, which of these most likely increases? A Natural selection B Genetic variation C Environmental fitness D Reproductive mutations 84 Some organisms have genes that improve their ability to survive and reproduce. If the genes also help their offspring survive and reproduce, then which of the following will most likely increase? F The frequency of the genes in one individual G The frequency of the genes in the population H The number of genes in one chromosome J The number of genes in the species B.7.G Analyze and evaluate scientific explanations concerning the complexity of the cell Endosybiosis Evolution of Eukaryotes Origin of mitochondria Engulfed aerobic bacteria, but did not digest them Mutually beneficial relationship natural selection Clip B.8.B Categorize organisms using a hierarchical classification system based on similarities and differences shared among groups Phylogeny and Taxonomy The evolutionary history of a group of related species is called phylogeny A scientific discipline called taxonomy is the study of naming living things. We use the same system to name so that there is no mistaking which organisms we are looking at. Memory devise King Phillip Came Over For Good Soup least specific Most specific 85. Dogs (Canus familiaris) are most closely related genetically to which of the following organisms? A. B. C. D. African hunting dog (Lycaon pictus) Grey wolf (Canus lupus) Grizzly bear (Ursus arctos) Domestic cat (Felis catus) 86. How Did the Eukaryotic Cell Evolve? A. It gained nutrients from the environment B. It mutated C. It engulfed an aerobic bacteria D. None of the above 87. Which of the following share the most recent common ancestor? A. mosses and ferns B. Mosses and pine trees C. Ferns and flowering plants D. pine trees and flowering plants. 88. How do Finches adapt to their environment? A. By migrating B. Color change of feathers C. Beak size depends on food source D. None of the above