12/03/2016 EdExcel Additional Science Biology Unit 2 – The Components of Life N Smith St. Aidan’s 12/03/2016 Topic 1 – The Building Blocks of Cells A Typical Animal Cell 1) Cytoplasm - this is where the reactions happen and these are controlled by enzymes 2) Nucleus – controls the cell’s activities 3) Cell Membrane – controls what comes in and out 12/03/2016 4) Ribosomes – protein synthesis happens here 5) Mitochondria energy is released here during respiration A Typical Plant Cell: 12/03/2016 Cell wall – made of cellulose which strengthens the cell Cell membrane – controls what comes in and out Large vacuole – contains sap and helps support the cell Chloroplasts (containing chlorophyll) – this is needed for photosynthesis Nucleus – controls what the cell does and stores information Cytoplasm – Chemical reactions happen here Bacteria 12/03/2016 Consider a bacteria cell in more detail: Bacteria – containing cytoplasm and a membrane surrounded by a cell wall. The genes are NOT in a distinct nucleus. The cell contains a number of features, including: 1) Chromosomal DNA, containing the genetic info of the cell 2) Plasmid DNA, containing extra information such as defence mechanisms 3) Flagella, which helps the cell move Using a light microscope 12/03/2016 1. Eyepiece 2. Arm 7. Lenses 6. Stage 5. Mirror 3. Focus adjustor 4. Base Magnification Calculations 12/03/2016 These microscopes have different powers of magnification. Consider this image of velcro: A “stereo” microscope If the “loop” on this image is measured to be 20cm tall at a magnification of 100x how big is it really? An old microscope! 2mm Genes, Chromosomes and DNA 12/03/2016 How genes work DNA Some facts: - DNA has a “double ______” structure - This contains instructions on what a cell does, how the organism should work etc - The instructions are in the form of a ______ - The code is made up from the four ____ that hold the strands together with hydrogen bonds - The bases represent the order in which _____ acids are assembled to make specific ________ Words – helix, amino, code, bases, proteins 12/03/2016 DNA Task: Find out how the structure of DNA was discovered, including: 1) An image of Crick and Watson with their original model 2) A brief desciption of what Crick and Watson did to discover DNA 3) How Franklin and Wilkins built on their work 12/03/2016 The Human Genome Project 12/03/2016 In 1990 an international project was launched called the “Human Genome Project”. The aim was to map the _______ makeup of the human race and includes work from ______ in 18 different countries. Possible benefits: • Improved genetic testing • Improved predictions and screening of ________ diseases • New gene ________ treatments • New knowledge of how ______ have changed Words – scientists, genetic, genes, inherited, therapy Uses of Genetic Engineering 12/03/2016 With genetic engineering I can produce milk that contains: • Extra protein • Lower levels of cholesterol • Human antibodies Basically, genetic engineering is when a gene is removed from one organism and inserted into another. Consider the example of making insulin: Genetic engineering - Insulin 12/03/2016 Step 1: Using RESTRICTION ENZYMES “cut out” the part of the human chromosome that is responsible for producing insulin. Step 2: Using another restriction enzyme cut open a ring of bacterial DNA (a “plasmid”). Other enzymes are then used to insert the piece of human DNA into the plasmid. Step 3: Place the plasmid into a bacterium which will start to divide rapidly. As it divides it will replicate the plasmid and make millions of them, each with the instruction to produce insulin. Commercial quantities of insulin can then be produced. Cell growth 1 - Mitosis Each daughter cell has the same number of chromosomes and genetic information as the parent. 12/03/2016 Cell growth 2 - Meiosis Each daughter cell has half the number of chromosomes of the parent. 12/03/2016 Mitosis: 1. Mitosis vs. Meiosis Used for growth and repair of cells 2. Used in asexual reproduction 3. Cells with identical number of chromosomes and genetic information are produced (“clones”) 12/03/2016 Meiosis: 1. Used to produce haploid gametes for sexual reproduction 2. Each daughter cell has half the number of chromosomes of the parent During meiosis copies of the genetic information are made and then the cell divides twice to form four daughter cells. Fertilisation The human egg and sperm cell (“GAMETES”) contain 23 chromosomes each and are created by meiosis. When fertilisation happens the gametes fuse together to make a single cell called a ZYGOTE (“diploid”). The zygote has 46 chromosomes (23 pairs) and continues to grow through mitosis. 12/03/2016 Key words 12/03/2016 Gamete • Contains half the number of chromosomes Zygote •This is formed when an egg is fertilised by a sperm Diploid • A section of DNA Haploid Gene • Contains the full number of chromosomes •An egg or a sperm are called this Cloning Animals 12/03/2016 Here’s how Dolly the sheep was cloned: Clone Host mothers Pros and cons of cloning Medicinal Cloning new organs for use when humans’ organs fail 12/03/2016 Creating new food supplies Cloning Ethical issues – is it right to clone animals or humans? Risk of creating deformed animals or humans Cell specialisation During the development of a multi-celled organism cells differentiate to form specialised cells: 12/03/2016 A “stem cell” is a cell that hasn’t yet become specialised and can be found in embryos or bone marrow. These cells can be used to treat certain conditions but the use of these cells is very controversial. Ciliated epithelial cell White blood cell Nerve cell (neurone) Egg cell (ovum) Stem cell research 12/03/2016 Stem cells are cells that have not yet specialised: Embryo Egg and sperm Cloned embryos These stem cells have the potential to develop into any kind of cell. In grown adults they can be taken from bone marrow or they can come from embryos from unused IVF treatments. They can be used to treat conditions such as paralysis. The ethical issue: Should these embryos be treated as humans? Making proteins 1) DNA “unravels” and a copy of one strand is made 2) The strand copy is made to produce mRNA 3) The copy (with its code) then moves towards the ribosome 4) The ribosome “decodes” the code which tells the ribosome how to make the specific amino acid 5) Amino acids are then joined together to form a polypeptide (protein) 12/03/2016 Mutating DNA Each protein has its own specific number and order of amino acids. But what happens when DNA mutates? This mutation will cause different amino acids (and therefore different proteins) to be formed. These mutations can be beneficial, harmful or neutral. 12/03/2016 Introduction to Enzymes 12/03/2016 Enzymes are biological catalysts. They help the reactions that occur in our bodies by controlling the rate of reaction. An enzyme is basically a protein molecule made up of long chains of amino acids. These molecules are then “folded” to create a certain shape. Proteins are used in DNA replication, protein synthesis and digestion. The enzyme’s shape helps another molecule “fit” into it (“lock and key”): This shape can be destroyed (“denatured”) by high temperatures or the wrong pH: Enzyme Substrate Enzymes 12/03/2016 Enzymes work best in certain conditions: Enzymes are denatured beyond 40OC Enzyme activity 400C Temp Could be protease (found in the stomach) Could be amylase (found in the intestine) pH Enzymes are used in industry to bring about reactions at normal temperatures and pressures that would otherwise be expensive. However, most enzymes are denatured at high temperatures and can be costly to produce. pH 12/03/2016 Topic 2 – Organisms and Energy Respiration Introduction I enjoy taking samples using quadrats. In order to do this, I need energy. Where does this energy come from? Our energy comes from a process called respiration, which basically involves turning food and oxygen into energy and this reaction is controlled by enzymes. 12/03/2016 Diffusion 12/03/2016 Diffusion is when something travels from an area of high concentration to an area of low concentration. For example, consider the scent from a hamburger… The “scent particles” from this hamburger are in high concentration here: Eventually they will “diffuse” out into this area of low concentration: Oxygen passes into cells by diffusion Diffusion Summary 12/03/2016 Diffusion is when particles spread from an area of high concentration to an area of ___ concentration. The particles move along a “concentration _____” and this process takes no _____ (it’s a “passive” process”). Diffusion can be accelerated by increasing the _______ of the particles, which makes them move _______. Words – faster, low, gradient, temperature, energy Diffusion in the lungs 12/03/2016 Oxygen diffuses in and carbon dioxide diffuses out of blood in the lungs: CO2 (Aerobic) Respiration 12/03/2016 All living organisms have to move, _____, reproduce etc. Each of these life processes needs ENERGY. ___________ is the process our bodies use to produce this energy: Glucose + oxygen water + carbon dioxide + ENERGY The glucose we need comes from ______ and the oxygen from _________. Water and carbon dioxide are breathed out. The MAIN product of this equation is _________. Respiration happens in _________ in cells. Words – breathing, energy, grow, respiration, food, mitochondria Uses for this energy 12/03/2016 Animals and plants have many uses for the energy they generate from respiration: 1) To build up sugars in ______ 2) To build up body _______ 3) To maintain a constant body ___________ (warm-blooded mammals only) 4) To build up sugars, ________ and other nutrients in plants 5) To build up amino acids and ________ Words – nitrates, tissue, proteins, respiration, plants Heart rate/min 225 The Effect of Exercise 12/03/2016 Breathing rate/min Rest Exercise 100 Recovery 175 75 125 50 75 25 5 mins 10 mins 15 mins 20 mins During exercise the following things happen: heart rate increases, breathing increases and arteries supplying muscles dilate. These three things all help muscles to get the oxygen and glucose they need. Cardiac Output and Heart Rate 12/03/2016 The electrical impulses from the heart can be monitored using an electrocardiogram: Using this information and the volume of blood pushed by the heart (the “stroke volume”) you can calculate the cardiac output of the heart: Cardiac output = stroke volume x heart rate Muscles and exercise 12/03/2016 When we exercise our muscles are supplied with more oxygen and glucose, increasing the rate of respiration. Muscles store glucose as glycogen which can then be converted back into glucose during exercise. Anaerobic respiration 12/03/2016 Unlike aerobic respiration, anaerobic respiration is when energy is provided WITHOUT needing _________: Glucose lactic acid + a bit of energy This happens when the body can’t provide oxygen quick enough for __________ respiration to take place. Anaerobic respiration produces energy much _______ than aerobic respiration but only produces 1/20th as much. Lactic acid is also produced, and this can build up in muscles causing ______ and “excess post-exercise oxygen consumption” (“EPOC”), which explains why breathing and heart rates remain high after exercise. Words – debt, oxygen, fatigue, aerobic, quicker Photosynthesis 12/03/2016 Basically, photosynthesis is the process through which a plant makes its own food using carbon dioxide and water: That’s a nice plant. I’m going to put it in the sun and give it lots of water and air… CO2 H2O 12/03/2016 Photosynthesis – the 4 things you need SUNLIGHT Gives the plant energy CHLOROPHYLL WATER Travels up from the roots CARBON DIOXIDE Enters the leaf through small holes on the underneath The green stuff where the chemical reactions happen Photosynthesis equations Carbon dioxide + _____ Sunlight Chlorophyll 12/03/2016 glucose + _____ Sunlight 6CO2 + 6H20 Chlorophyll C6H12O6 + 6O2 The GLUCOSE produced by photosynthesis is used by the plant for _______ (through ____________). It is stored in the plant as ___________. Words – respiration, starch, water, oxygen, energy Structure of the Leaf Lots of chlorophyll 12/03/2016 Large surface area Transparent Thin structure Packed with chloroplasts Network of veins Lots of air spaces Holes Limiting Photosynthesis What factors could limit the rate of photosynthesis? 1. Temperature – the best temperature is about 300C – anything above 400C will slow photosynthesis right down 2. CO2 – if there is more carbon dioxide photosynthesis will happen quicker 3. Light – if there is more light photosynthesis happens faster 12/03/2016 12/03/2016 Drawing graphs of these factors 1. Temperature Photosynthesis is controlled by enzymes – these are destroyed at temperatures above 400C 2. Carbon dioxide Photosynthesis increases at first but is then limited by a lack of increase in temp or light 3. Light Photosynthesis increases at first but is then limited by a lack of increase in temp or CO2 Encouraging Photosynthesis 12/03/2016 Using knowledge of limiting factors, explain how plant growth is encouraged in a greenhouse: Water loss 12/03/2016 Water loss through the stomata is biggest on a hot, dry, windy day. Plants that live in these conditions often have a thicker waxy layer. Transpiration 12/03/2016 1) Water evaporates through the stomata 2) Water passes back into the leaf through xylem vessels by osmosis 3) Water is then pulled upwards through the xylem tissue 4) This is replaced by water entering from the root tissue 5) Water enters root hair cells by osmosis to eventually replace the water lost through respiration Xylem and Phloem Xylem are used by the plant to transport water and soluble mineral salts from the roots to the stem and the leaves. Phloem are tubes used by the plant to transport dissolved food to the whole plant for respiration and storage. 12/03/2016 Root hair cells 12/03/2016 Plant roots are made of “root hair cells” which have two features that help them to take in water and nutrients (“active uptake”): Root hair cells Large surface area Thin cell membrane More on Active Transport 12/03/2016 In diffusion substances moved along a concentration gradient. In active transport, substances move against this gradient: Outside cell Inside cell Cell membrane This process takes ______ and this comes from ___________. It enables cells to take in substances even though there are in very small __________. Root hair cells take in ______ using active transport. Words – concentration, energy, respiration, nutrients 12/03/2016 Diffusion and Active Transport in plants Mineral More concentrated Carbon dioxide diffuses into the leaf through holes in the bottom surface. Less concentrated …while plant nutrients are taken in by root hair cells using active transport. Osmosis 12/03/2016 Osmosis is a “special kind of ___________”. It’s when water diffuses from a __________ area to a less concentrated area through a partially permeable _________ (i.e. one that allows water to move through but not anything else): Water Sugar solution In this example the water molecules will move from left to right (along the concentration ______) and gradually _____ the sugar solution. Words – membrane, concentrated, dilute, diffusion, gradient Potato cells 12/03/2016 Strong sugar solution Medium sugar solution Weak sugar solution Osmosis of water from leaves 12/03/2016 Low conc. of water Water leaves the plant by diffusing through osmosis into the air spaces and then evaporating. Low conc. of water High conc. of water Taking samples of an ecosystem 12/03/2016 Using different “sampling techniques” we can measure changes in an ecosystem. The two main measurements are: 1) The physical conditions of a habitat (temperature etc) 2) The populations of different species in that habitat Some common ways of measuring… Help! Measuring temp, pH etc Taking animal samples Taking samples using quadrats Topic 3 – Common Systems 12/03/2016 Fossils 12/03/2016 Fossils provide evidence of early life and could have been formed in many ways. Four examples: This fossil of a bat was formed due to hard parts of the animal not decaying This fossil was formed by parts of its body being replaced by minerals Why could there be gaps in the fossil record? This bee and orchid pollen were preserved in amber – the amber lacked some of the conditions needed for decay to happen Fossilised footprints Fossil records 12/03/2016 Fossil records can provide a useful way of observing a species’ development: The “Stenheim skull”, found in Germany in 1933 Oh no… The problem is, many early forms of life only had soft bodies and the few remaining traces of them have been destroyed by geological activity. This makes it difficult for scientists to know what happened in the distant past. The Pentadactyl Limb 12/03/2016 The “pentadactyl limb” refers to features like our hands that have five “digits”. It’s a common feature for mammals. How does that provide evidence for evolution? Plant Growth 12/03/2016 Plants grow due to their cells dividing through mitosis and each cell growing through elongation. The cells then specialise into root hair cells, palisade cells etc. Unlike animals, plants continue to grow for the rest of their lives. Human Growth 12/03/2016 In humans, we grow by cell division through mitosis and cell cells becoming specialised. There are five main areas of human growth: 1) Infancy (up to two years) 2) Childhood (2-11) 3) Puberty (11-13/15) 4) Adulthood (15 upwards) 5) Old age (60+ years) Growth rate (cm/year) Age The four parts of blood 1. RED BLOOD CELLS – contain haemoglobin and carry ______ around the body. They have no _______ and a large surface area. 2. PLATELETS – small bits of cells that lie around waiting for a cut to happen so that they can ____ (for a scab). 3. WHITE BLOOD CELLS – kill invading _______ by producing _________ or engulfing (“eating”) the microbe. These three are all carried around by the PLASMA (a straw-coloured liquid). Plasma transports CO2 and ______ as well as taking away waste products to the ______. Words – antibodies, clot, kidneys, oxygen, nucleus, glucose, microbes. 12/03/2016 Cells, tissues, organs and systems 12/03/2016 Basically, all living things are made up of cells… A group of CELLS makes up a TISSUE A group of TISSUES makes up an ORGAN A group of ORGANS makes up a SYSTEM A group of SYSTEMS make up an ORGANISM Another example Here’s another example in humans: Muscle cells Muscle tissue Organ System Organism 12/03/2016 The Circulatory system 12/03/2016 The circulatory system is responsible for pumping ______ around the body. We need blood to be taken around the body because blood contains ________ and _______. These are needed so that all the ____ in our bodies can produce _____ through _________. The main organs in the circulatory system are the _____, the lungs and the kidneys. Words – energy, heart, blood, glucose, respiration, oxygen, cells The Heart 12/03/2016 1. Deoxygenated blood (i.e. blood without oxygen) enters through the vena cava into the right atrium 4. Oxygenated blood from the lungs enters through the pulmonary vein into the left atrium 2. It’s then pumped through the tricuspid valve into the right ventricle 5. It’s then pumped through the bicuspid valve into the left ventricle 3. It’s then pumped through the semi-lunar valve up to the lungs through the pulmonary artery 6. It’s then pumped out of the aorta to the rest of the body “Double Circulation” 1) Blood gets pumped from the heart to the lungs and picks up oxygen. The haemoglobin in the cells becomes oxyhaemoglobin 5) After the oxygen and glucose have been removed for respiration the blood is sent back to the heart and starts again 12/03/2016 2) The blood is then taken back to the heart… 3) The heart pumps the blood to the intestine (where oxygen and glucose are removed). The oxyhaemoglobin is split up into oxygen and haemoglobin… 4) … and to the rest of the body (where oxygen is also removed) Arteries, veins and capillaries 12/03/2016 Arteries carry high pressure blood away from the heart. They have smaller lumen and no valves. Capillaries have thin walls (one cell thick) to allow glucose and oxygen to pass through. Also used to connect arteries to veins. Veins carry low pressure blood back to the heart. They have thinner, less elastic walls and have valves to prevent backflow of blood. The Digestive System 12/03/2016 Match these functions with the parts of the digestive system that do them… In here the food is chewed to This tube uses muscle contractions to push the food down start breaking it down. An enzyme (amylase) is also added. Bile is produced here Bile is stored here Excess water is absorbed here Food is absorbed into the bloodstream here This organ mixes the food with hydrochloric acid to kill bacteria Enzymes are made here Peristalsis 12/03/2016 “Peristalsis” is the movement of muscles to push food down the gullet. The digestive system 12/03/2016 The whole point of digestion is to break down our food so that we can get the bits we need from it… The main foods affected are CARBOHYDRATES – these are broken down into GLUCOSE. Hydrochloric acid is produced in the stomach to kill bacteria. Digestion also depends on “enzymes”... Enzymes in digestion 12/03/2016 Carbohydrase (produced in the mouth, pancreas and small intestine) breaks _______ (a carbohydrate) down into glucose: Protease (produced in the stomach, pancreas and small intestine) breaks _______ down into amino acids: Lipase (produced in the pancreas and small intestine) breaks fats (_____) down into fatty acids and glycerol: Words – blood, lipids, proteins, digestion, starch, smaller Bloodstream Enzymes can be produced by the body to help _______. When they come into contact and react with food they break it down into ______ pieces which can then pass into the ______: Bile and The Liver 12/03/2016 Bile is a chemical produced in the liver and stored in the gall bladder. It has 2 functions: 1) It neutralises stomach acid and produces alkaline conditions for enzymes to work in 2) It emulsifies (“breaks down” fats: Fat globules Fat droplets Diffusion in Villi 12/03/2016 In the intestine, large food molecules are broken down into smaller ones that then diffuse into the blood through villi in the intestine. Villi also have a very good blood supply and a large surface area. They have tiny folds in their cell membrane called microvilli, which increase the surface area. Functional Foods 12/03/2016 “Functional foods” is a term that describes foods like: Task: find out the claimed benefits of functional foods, including: 1) Probiotics 2) Prebiotics 3) Plant esters