BIO 112: Organisms, Evolution, & Ecosystems Spring 2015 Syllabus Professor: Dr. Mark Stanback Office: Watson 282 Phone: 704-894-2325 email: mastanback@davidson.edu Office Hours Mon 11:30 – 1:30 Wed 11:30 – 1:30 or by appointment Lecture: TR 12:15 - 1:30 in Dana 146 Lab Section A (20065): T 1:30 - 4:20 in Watson 119 Lab Section B (20522): W 1:40 - 4:20 in Watson 119 Course Description: Biology 112 is intended as an in-depth introduction to the principles of biology at and above the level of the organism. Our focus will be on evolution, ecology, anatomy, and physiology. Important: I use e-mail as a regular form of communication in this class. You should check your email at least once a day (and remember, always fill in the subject line when you email me). Textbooks* Sadava, D., Hillis, D.M., Heller, H.C., Berenbaum, M.R. 2011. Life: The Science of Biology, 9th ed. Sinauer Assoc., Sunderland, MA. (10th ed also fine) Perlman, R.L. 2013. Evolution and Medicine. Oxford University Press, Oxford, UK. Pechenik, J.A. 2012. A Short Guide to Writing About Biology, 8th ed. Pearson, Boston, MA. (the 7th edition of Pechenik is also acceptable). * For your convenience I have put a copy of Sadava et al. and a copy of Pechenik on reserve in the library. On Tuesdays we’ll sometimes start class by discussing pertinent articles from the NY Times Science section. It’s a great way to keep up with cool findings in science! Math & Science Center The Math & Science Center (MSC) offers free assistance to students in all areas of math and science, with a focus on the introductory courses. Trained and highly qualified peers hold one-on-one and small-group tutoring sessions on a drop-in basis or by appointment, as well as timely recap sessions ahead of scheduled reviews. Emphasis is placed on thinking critically, understanding concepts, making connections, and communicating effectively, not just getting correct answers. In addition, students can start or join a study group and use the MSC as a group or individual study space. Located in the Center for Teaching & Learning (CTL) on the first floor of the College Library, drop-in hours are Sunday through Thursday, 8-11 PM, and Sunday, Tuesday, Thursday, 4-6 PM, beginning Tuesday, January 20. Appointments are available at other times. For more information, visit http://sites.davidson.edu/ctl, or contact Dr. Mark Barsoum (mabarsoum or ext. 2796). Reviews: Reviews will consist of multiple choice, short answer, and discussion questions. Reviews will be taken in lab and are closed book. Spots can be found on Moodle. Moodle: I will post spots, lectures, handouts, and readings on Moodle. This is also where you’ll take your EvoMed quizzes. Although we can’t go entirely paperless in this course, you should try to minimize unnecessary printing (there’s really no need for hard copies of spots or lectures). Grades: Lecture Grade: Review 1 (17, 18 Feb: in lab) Review 2 (24, 25 Mar: in lab) Cumulative Final Exam (Chambers) EvoMed quizzes Laboratory Grade: Pig Practical (29 Apr) Pig Quizzes (3 @ 10 pts each) Bird Feeder Poster (group poster) Goldfish Poster (group poster) Total Course Points Possible = = = = 100 100 200 110 = = = = = 100 30 30 30 700 Letter grades will be assigned using the following guidelines. A = 93.33 - 100% of total possible points A= 89.99 - 93.32 C = B+ = 86.66 - 89.98 C= B = 83.33 - 86.65 D+ = B= 79.99 - 83.32 D = C+ = 76.66 - 79.98 F = 73.33 - 76.65 69.99 - 73.32 66.66 - 69.98 59.99 - 66.65 <59.99 Honor Code: All of your work in this course is covered under the college honor code and must be pledged (the word “pledged” and your signature). Points will be deducted from any work that is not pledged. Please visit the following page on the departmental web site for a detailed discussion of what constitutes plagiarism in scientific writing http://www.bio.davidson.edu/dept/plagiarism.html Attendance: You are expected to attend all lecture and laboratory sessions and arrive on time. Any student missing more than 2 labs will lose a letter grade. Please note that I do not distinguish between good and bad causes of or reasons for an absence. You are responsible for any assignments given or due on days missed. You are on your honor to record attendance accurately on posted attendance sheets. A busy schedule (e.g. reviews in other courses, major papers due, commitments to service and social organizations, personal travel) will not be considered a valid excuse for rescheduling reviews or lab practicals. Lecture topics will be covered in the order shown below. I will announce in class which chapters/pages you should be reading for upcoming lectures and will inform you of all information to be covered on scheduled reviews. Lecture Topics EVOLUTION Mechanisms of Evolution Species and Speciation Chapters in Sadava et al. 21 22, 23 ECOLOGY Behavioral Ecology Population Ecology Community Ecology Systems Ecology 53 55 56, 57 58 ANATOMY & PHYSIOLOGY Intro to Physiology and Anatomy Hormones Osmoregulation Circulation Gas Exchange Reproduction 40 (in part) 41 (in part) 52 (in part) 50 49 43 Evolution and Medicine: Many people mistakenly think that evolutionary biology has no relevance in our lives. This short, readable book will not only address the importance of evolution to medicine, it will also help you to think like an evolutionary biologist. We will read this book during the first half of the semester and spend the beginning of each designated class period (see below) discussing it. On these days, there will be a Moodle quiz on the day’s material due before class (available from noon the day before to noon the day of class - “quiz day”). There will be a total of 11 quizzes, each worth 10 points. You will have 15 minutes to take each quiz (they are short). EvoMed material will not be covered on the reviews or exam unless we also cover the material during lecture. Date 20 Jan 22 Jan 27 Jan 29 Jan 3 Feb 5 Feb 10 Feb 12 Feb 19 Feb 24 Feb 26 Feb Chapter 1 2 3 4 5 6 7 8 9 10 11 Topic Evolution and medicine Human demography, history, and disease Evolutionary genetics Cystic fibrosis Life history tradeoffs and the evolutionary biology of aging Cancer Host-pathogen coevolution Sexually transmitted diseases Malaria Gene-culture coevolution: lactase persistence Man-made diseases LABORATORY The laboratory component of this course will feature computer simulations of evolution and ecology (Populus and SimBio), a study of foraging ecology of cardinals, a goldfish physiology experiment, and an in-depth fetal pig dissection. For the pig dissection, each student will get their own pig to dissect. You will use departmental dissection equipment. I will provide you with a thorough dissection manual and color manuals will also be available in lab. Consult appropriate chapters in your text while we are working on our pigs. Note that there will be quizzes during the pig dissection. Week of Jan 12 Jan 19 Jan 26 Feb 2 Feb 9 Feb 16 Feb 23 Mar 2 Mar 9 Mar 16 Mar 23 Mar 30 Apr 6 Apr 13 Apr 20 Apr 27 Activities TOSLS Populus: selection and drift SimBio Flowers and Trees, SimBio How the Guppy Got Its Spots Feeder experiment Feeder data analysis and poster production Review I in lab SimBio Isle Royale (plus paper discussion), SimBio Keystone Predator No lab (Spring Break) Goldfish Physiology Goldfish poster production and presentation Review II in lab Fetal Pig (external, digestive + quiz) No lab (Easter Break) Fetal Pig (respiratory, circulatory + quiz) Fetal Pig (circulatory, urogenital + quiz) Fetal Pig (review Tues and Wed), Practical Wed night (29 Apr) Bio Lunch! Every Friday the Biology Faculty and interested Biology students have lunch at Commons (from ~ 12:20 – 1:20). You don’t need to be a major. Join us!