Cell Structure and Membrane Function Correlates with Chapters 6 & 7 in Campbell & Reece Biology 1 Points to ponder: • What is a cell? • Why are most cells small? • What do prokaryotic and eukaryotic cell have in common? • How are cells organized? • How do things move across the plasma membrane? • What is cellular respiration? 2 Cellular level organization • Cell = fundamental unit of life • Some organisms = 1 cell only • Large organisms = trillions of cells Cellular level organization • All cells contain mostly the same components • Specialized organelles perform processes needed for life 3.1 What is a cell? What does the Cell Theory tell us? • A cell is the basic unit of life • All living things are made up of cells • New cells arise from preexisting cells 1660’s The cell was first discovered by Robert Hooke. Living cells - Anton van Leewenhoek; earliest microscope 1830’s Matthias Schleiden Theodor Schwann Rudolf Virchow 5 Compound Light Microscope • May have one or two eyepieces to look through • 10x ocular lens in the eyepiece • Rotating nosepiece has low (scanning), medium, high power objective lenses (e.g. 4x, 10x, 40x) • Total magnification= ocular x objective 6 Stereomicroscope (Binocular Dissecting Microscope) • Used for relatively low power examination of (1) large or (2) whole specimens (opaque, light does not have to pass through) • Three dimensional images 7 Microscopy: Two things to take into account: Magnification • The process of enlarging the size of something, as an optical image • Needed to see the detail in very small things Resolving power, or “resolution” • ‘Resolving power' describes the shortest distance that is found between two specimens that can be distinguished as separate. • The ability to clearly determine two closely placed objects. • Affects clarity, ability to focus • Poor resolution: the objects or points will blur together. 8 3.1 What is a cell? What are some common microscopes used to view cells? • Compound light microscope – Lower magnification – Uses light beams to view images – Can view live specimens in 2-D • Transmission electron microscope – 2-D image – Uses electrons to view internal structure – High magnification, no live specimens • Scanning electron microscope – 3-D image – Uses electrons to view surface structures – High magnification, no live specimens 9 How small are cells? • Most cells are measured in micrometers – µm – One millionth of a meter;1×10−6 m,or 1⁄1,000,000 m – Viruses are measured in nanometers (nm), a billionth of a meter! 10 3.1 What is a cell? Why are most cells small? • Consider the cell surface-area-to-volume ratio: – Small cells have a larger amount of surface area compared to the volume – An increase in surface area allows for more nutrients to pass into the cell and wastes to exit the cell more efficiently – There is a limit to how large a cell can be and be an efficient and metabolically active cell; lots of Volume means lots to feed, etc. 11 3.1 What is a cell? Thinking about surface area to volume in a cell Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. 1 mm Surface area (square mm) Volume (cubic mm) Surface area Volume 2 mm 6 ´ 1 mm2 = 6 mm2 6 ´ 4 mm2 = 24 mm2 (1 mm)3 = 1 mm3 (2 mm)3 = 8 mm3 6 1 24 = 8 3 1 12 3.2 How cells are organized What are the two major types of cells in all living organisms? • Prokaryotic cells – Thought to be the first cells to evolve – Lack a nucleus – Represented by bacteria and archaea • Eukaryotic cells – Have a nucleus that houses DNA – Many membrane-bound organelles 13 3.2 How cells are organized What do prokaryotic and eukaryotic cells have in common? • A plasma membrane that surrounds and delineates the cell • Cytoplasm that is the semi-fluid portion inside the cell that contains organelles • DNA • Ribosomes 14 3.2 How cells are organized Where did eukaryotic cells come from? Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Original prokaryotic cell The Endosymbiosis Hypothesis DNA 1. Cell gains a nucleus by the plasma membrane invaginating and surrounding the DNA with a double membrane. 2. Cell gains an endomembrane system by proliferation of membrane. 3. Cell gains protomitochondria. protomitochondrion 4. Cell gains protochloroplasts. mitochondrion protochloroplast chloroplast 15 Animal cell Plant cell 3.2 How cells are organized What do eukaryotic cells look like? Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. plasma membrane nuclear envelope nucleolus chromatin endoplasmic reticulum Plasma membrane: outer surface that regulates entrance and exit of molecules protein 50 nm phospholipid NUCLEUS: Nuclear envelope: double membrane with nuclear pores that encloses nucleus Chromatin: diffuse threads containing DNA and protein Nucleolus: region that produces subunits of ribosomes CYTOSKELETON: maintains cell shape and assists movement of cell parts: Microtubules: cylinders of protein molecules present in cytoplasm, centrioles, cilia, and flagella Intermediate filaments: protein fibers that provide support and strength Actin filaments: protein fibers that play a role in movement of cell and organelles ENDOPLASMIC RETICULUM: Rough ER: studded with ribosomes, processes proteins Smooth ER: lacks ribosomes, synthesizes lipid molecules Ribosomes: particles that carry out protein synthesis Centrioles: short cylinders of microtubules of unknown function Centrosome: microtubule organizing center that contains a pair of centrioles Mitochondrion: organelle that carries out cellular respiration, producing ATP molecules Lysosome: vesicle that digests macromolecules and even cell parts Polyribosome: string of ribosomes simultaneously synthesizing same protein Vesicle: membrane-bounded sac that stores and transports substances Cytoplasm: semifluid matrix outside nucleus that contains organelles Golgi apparatus: processes, packages, and secretes modified cell products © Alfred Pasieka/Photo Researchers, Inc. 16 What are some characteristics of the plasma membrane? • It is a phospholipid bilayer • It is embedded with proteins that move in space • It contains cholesterol for support • It contains carbohydrates on proteins and lipids • Selectively permeable 17 3.3 The plasma membrane and how substances cross it What does selectively permeable mean? • The membrane allows some things in while keeping other substances out Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. charged molecules and ions -+ H2O aquaporin noncharged molecules + - macromolecule phospholipid molecule protein 18 3.3 The plasma membrane and how substances cross it How do things move across the plasma membrane? 1. Diffusion 2. Osmosis 3. Facilitated transport 4. Active transport 5. Endocytosis and exocytosis 19 Passive Transport: Diffusion and Osmosis Diffusion is the random movement of molecules from a higher concentration to a lower concentration . How Diffusion Works - narrated animation – This can be through the air (ex: the smell of coffee wafting through your house), or… – Through a liquid (ex: tea bag steeping in a mug of water), or… – Molecule passing through the cell membrane pores, until they are evenly spread out, or until a state of equilibrium is reached. 20 Facilitated Diffusion • Facilitated transport is the transport of molecules across the plasma membrane from higher concentration to lower concentration via a protein carrier embedded in the membrane – Useful when molecules are large, or hydrophilic How Facilitated Diffusion works – narrated animation 21 OSMOSIS • Osmosis is the diffusion of water molecules across a semi-permeable membrane… – from an region of high water concentration to an region of lower concentration How Osmosis Works – narrated animation 22 How does tonicity change a cell? Rarely, in nature do we fine PURE water. It usually has solutes dissolved in it. We refer to the amount of solute in water by its “tonicity”. Turgor pressure: the pressure exerted on a plant cell wall by water passing into the cell by osmosis Also called hydrostatic pressure. Water potential: the tendency of water to leave one place in favor of another. Water always moves from an area of higher water potential to an area of lower water potential. 23 3.3 The plasma membrane and how substances cross it How does tonicity change a cell? • Hemolysis and Crenation: narrated animation • Hypertonic solutions have more solute than the inside of the cell = water will osmose OUT of cell and lead to shrinking (crenation, or plasmolysis) • Hypotonic solutions have less solute than the inside of the cell = water will osmose INTO cell and lead to swelling, and possibly cytolysis (bursting) • Isotonic solutions have equal amounts of solute inside and outside the cell and thus does not affect the cell 24 Tonicity be patient and wait and watch… 25 Self-quiz: what is being demonstrated in this picture? 26 Same principle can be used for water purification 27 3.3 The plasma membrane and how substances cross it What is Active Transport? • Active transport is the movement of molecules from a lower to higher concentration • Because molecules are being moved against a concentration gradient… • …it requires ENERGY expenditure on the part of the cell; using ATP as energy • Requires a protein carrier to move the molecules Outside K+ K+ K+ P ATP ADP K+ Inside K+ 28 The Sodium-Potassium Pump • An example of active transport • In order to maintain the cell membrane potential and osmolarity cells must keep a low concentration of sodium ions and high levels of potassium ions within the cell (intracellular). • Outside cells (extracellular), there are high concentrations of sodium and low concentrations of potassium, so diffusion occurs through ion channels in the plasma membrane. • In order to keep the appropriate concentrations, the sodiumpotassium pump pumps sodium out and potassium in through active transport. • This requires the hydrolysis of ATP (energy) • Narrated animation “How the Sodium Potassium Pump Works” 29 30 Nerve cells 31 Resting potential vs Action Potential in a Neuron 32 3.3 The plasma membrane and how substances cross it • What are endocytosis and exocytosis? Endocytosis transports molecules or cells into the cell via invagination of the plasma membrane to form a vesicle (storage compartment) • Exocytosis transports molecules outside the cell via fusion of a vesicle with the plasma membrane Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Outside Inside substances taken in vesicle a. Endocytosis Outside substances released vesicle Narrated animation: Endocytosis and Exocytosis Inside b. Exocytosis 33 Phagocytes • Phagocytes are white blood cells that engulf and break down (enzymatically) invasive organisms in your body. Narrated animation: Phagocytosis 34 Aside from the Plasma Membrane and its importance, what other structures would you find in eukaryotic cells? 35 The Extracellular Matrix (ECM) of Animal Cells • Animal cells – Lack cell walls – Are covered by an elaborate matrix, the ECM made up of glycoproteins and other macromolecules • Functions of the ECM include – Support – Adhesion – Movement – Regulation Intercellular Junctions • A cell junction is a structure within a tissue of a multicellular organism. • Cell junctions are especially abundant in epithelial tissues. • They consist of protein complexes and provide contact between neighboring cells, between a cell and the extracellular matrix, or control the paracellular transport. Animals: Tight Junctions, Desmosomes, and Gap Junctions • In animals, there are three types of intercellular junctions – Tight junctions – Desmosomes – Gap junctions •Invertebrates have several other types of specific junctions, for example Septate junctions or C. elegans apical junction. • Types of intercellular junctions in animals Desmosomes act like spot welds to hold together tissues that undergo considerable stress (such as skin or heart muscle). Tight junctions are tightly stitched seams between cells. The junction completely encircles each cell, preventing the movement of material between the cell. Tight junctions are characteristic of cells lining the digestive tract, where materials are required to pass through cells (rather than intercellular spaces) to penetrate the bloodstream. Gap junctions are narrow tunnels between cells that consist of proteins called connexons. The proteins allow only the passage of ions and small molecules. In this manner, gap junctions allow communication between cells through the exchange of materials or the transmission of electrical impulses. Cell Wall • Animal cells do not have cell walls, nor do most Protozoans • All plant cells have primary cell wall composed of cellulose • Some plant cells have secondary cell wall composed of lignin for even greater strength Plants: Plasmodesmata • Plasmodesmata – Are channels that perforate plant cell walls – Allow for movement of ions, small molecules like sugars and amino acids, and even macromolecules like RNA and proteins, between cells Cell walls Interior of cell Interior of cell Figure 6.30 0.5 µm Plasmodesmata Plasma membranes Nucleus • Surrounded by a double membrane • Holds and protects the DNA • DNA inside stores genetic information in the form of genes • Normally can’t see DNA because its “unspooled” into thread-like chromatin Nucleus, continued – DNA is usually pictured as forming distinctly Xshaped chromosomes – Chromatin coils into chromosomes right when cells are about to divide – Most of time DNA is uncoiled into long, thin chromatin molecules – Looks grainy under microscope Nucleus, continued – Every cell in an organism has identical DNA – DNA codes for many different traits – Which genes (recipes) are activated depends on cell – When a gene is activated it sends mRNA (m is for messenger) into cytoplasm resulting in construction of proteins Nucleus, continued • Nucleus Continued – Most cell nuclei have region of darker material the nucleolus – DNA there produces rRNA – rRNA joins with proteins in cytoplasm to make ribosomes – Nuclear membrane thus needs passageways (nuclear pores) through it to allow stuff to enter and leave the nucleus What is the structure and function of ribosomes? • Organelles made of RNA and protein • May be (1) bound to the endoplasmic reticulum or (2) free floating in the cell • Site of protein synthesis 3.4 The nucleus and the production of proteins What is the endomembrane system? • A series of membranes in which molecules are transported in the cell • It consists of the nuclear envelope, endoplasmic reticulum, Golgi apparatus, lysosomes and vesicles 47 Endoplasmic reticulum (ER) – Complex system of transport canals, made of folded membranes – Continuous with outer nuclear membrane – Rough ER has many ribosomes attached to it • Proteins made in ribosomes enter ER channels and are modified for transport out of cell • Sent to Golgi bodies for packaging into vesicles for shipping to elsewhere Smooth ER • Lacks ribosomes but aids in making carbohydrates and lipids – Manufactures the phospholipid molecules used to build cell membranes – Builds certain hormones (like testosterone) – Helps with detoxification of poisons in the liver Endomembrane System, continued • Golgi Apparatus – Stack of 3-20 slightly curved folded sacs – process, package and deliver proteins and lipids from the ER – Either sends them to cell membrane for secretion, or it repackages molecules into vesicles Endomembrane System, continued • Lysosomes – Membranous sacs made by the Golgis – Filled with powerful digestive enzymes – Used to digest large molecules brought into cell – Ex: white blood cell ingests bacteria, wrapping them up in vesicles, then their lysosomes fuse with vesicles, digesting contents – Enzymes can also be released into cell itself, resulting in autolysis (death) = “suicide sacs” – May play a role in APOPTOSIS (programmed cell death (see article:http://www.jbc.org/content/284/33/21783#sec10) LYSOSOMES: narrated animation • Vacuoles and vesicles – Vacuoles and vesicles may be used to store and /or transport substances (water, waste, food, enzymes) – Vacuoles: large membranous sacs • Plant cell vacuoles are much larger and more prominent • Large central vacuole takes up most of space in plant cell, TURGOR – Vesicles: smaller sacs • Animal cells More eukaryotic organelles • Peroxisomes – Also membranous sac filled with enzymes – Contain enzymes that that oxidize very long chain fatty acids (VLCFA) into hydrogen peroxide – Hydrogen peroxide immediately broken down into oxygen and water by other enzymes (catalase) Energy-Related Organelles • Chloroplasts – Photosynthesis happens here – Surrounded by two membranes – Inside are membranous sacs, thylakoids, bathed in fluid stroma – Chlorophyll molecules in thylakoid membranes capture light energy – Use absorbed solar energy to convert CO2 and water into carbohydrates, giving off oxygen as waste gas 3.6 Mitochondria and cellular metabolism Energy-Related Organelles Mitochondria • A highly folded organelle in eukaryotic cells • Produces energy in the form of ATP • Glucose (carb) is converted into ATP (usable energy molecules) to power all of an organism’s metabolic needs Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. outer membrane intermembrane space inner membrane 200 nm matrix cristae – Cellular respiration Carbohydrate + O2 CO2 + H20 +ATP 55 © Dr. Don W. Fawcett/Visuals Unlimited 3.5 The cytoskeleton and cell movement What is the cytoskeleton? • A series of protein filaments that maintain cell shape as well as anchors and/or moves organelles in the cell • Made of 3 types of fibers: • large microtubules (tubulin polymers, average length of 25 µm) • thin actin filaments • medium-sized intermediate filaments 56 • Cytoskeleton – Interconnected network of filaments and tubes running between nucleus and plasma membrane – Maintains cell’s shape – Allows organelles to move within cell – Sometimes makes cell move 3.5 The cytoskeleton and cell movement What are cilia and flagella? • Both are made of microtubules Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Flagellum microtubules • Both are used in movement cilia sperm plasma membrane flagellum secretory cell a. b. • Cilia are about 20x shorter than flagella flagellum c. 58 Both cilia and flagella use the 9+2 arrangement of microtubules to generate movement. http://www.northland.cc.mn.us/biology/biology1111/animations/flagellum.html 59 CENTRIOLES: also made of microtubules; 9+3 arrangement. Used to separate chromosomes during cell division (spindle). A centriole is a barrelshaped cell structure found in most animal eukaryotic cells, though absent in higher plants and most fungi. The walls of each centriole are usually composed of nine triplets of microtubules (protein of the cytoskeleton). 60