AP Biology Assignment Sheet for Biochemistry Unit 2014 Chapters 1 – 5 and Chapter 8 pages 152 – 160 (8.4 - 8.5) Date , Aug. 20 Class Discussion Topic/Activity Introduce Course Discuss Forever Fix Book Scavenger Hunt Scientific Method What is a hypothesis? What is a prediction? Quiz 1 Wed., Aug. 21 Collect Focus Questions Chapter 3: Properties of water What properties of water are being observed in Transpiration? Assignment Learning Targets (Unless otherwise noted assignments are due the next day class meets) Chapter 1: 1) I can skim this chapter and use it as a guide to help introduce myself to the 4 Big Ideas in AP Biology: A) Evolution, B) Energetics and Cellular Processes, C) Information and Genetics D) Interactions 2) I can summarize and apply all of the different parts of the scientific method. a) I can write down the steps of the scientific method b) I can explain the difference between a hypothesis and a prediction. c) I can describe what is meant by a controlled experiment 3) I can use scientific notation, and convert units within the metric system. 4) I can determine what type of graph to use for different data, and interpret the data from graphs. Chapter 2 1) I can identify the elements of life. 2) I can define the different types of chemical bonds and identify the role of electrons in each type of bond: a) I can distinguish between polar and non-polar covalent bonds. b) I can identify an ionic bond and explain how it works. c) I can identify a hydrogen bond and explain how it works. d) I can explain the relative strengths of each type of bond. Chapter3: 1) I can explain the significance of polar covalent and hydrogen bonds within and between water molecules. a) I can determine how many water molecules can bond with each other. b) I can describe the four emergent properties of water and explain how each property effects life. i) Adhesion and cohesion ii) Water moderates temperature (1) High specific heat (2) Evaporative cooling (3) High heat of vaporization iii) Water is a versatile solvent iv) Water is less dense when it freezes. 2) I can describe how acids and bases affect living organisms. a) I can determine the relationship between H+ and OH-in acidic, basic and neutral solutions. b) I can relate the relative amounts of H+ and · Read chapters 1 and 2 · Complete mastering biology assignment 1 · Complete mastering biology assignment; Chapters 1 and 2 Note: The first mastering biology assignment should be a review for most of you. Please let me know if you struggle with any parts of this. Also note: When working with mastering biology there are practicing assignments and parts that count for points. Be sure to determine when you need practice and when you don’t Videos to watch before class: Chapter 1: Biology Chapter 2 Chemical Bonds Prezi Introduction to AP Biology Atoms Water and Carbon Focus Questions: To be handed in tomorrow. 1. What are the 6 elements of life? 2. Which of the bonds involve sharing of electrons? Explain how the electrons are shared. 3. Which of the bonds involve attractions? Explain these attractions. 4. List the following bonds in order of their strength: ionic, polar covalent, non polar covalent, hydrogen bonds. Video to watch: Chapter 3: Water Acids Bases pH Crash course: Water- Liquid Awesome Biology · Read chapters 3 · Mastering biology chapter 3 PURCHASE A COMPOSITION NOTE BOOK FOR ALL LAB DATA. BRING THIS TO CLASS TOMORROW! ● Leave the first two pages of this composition book empty for a table of contents. WRITE THE FOLLOWING IN YOUR COMPOSITION LAB OH- to the pH scale c) I can explain the logarithmic connection to the pH scale. d) I can explain what a buffer is, how it works, and how it affects living organisms. Thurs., Aug 22 Fri., Aug. 23 Set up lab. Take first measurements Discuss: What variable(s) are not being controlled in this investigation? Share : Share your hypothesis with other groups. Have the other groups determine your prediction from your hypothesis Discuss any questions on LT’s from chapters 1 - 4 Chapter 4: 1. I can explain how carbon’s electron configuration accounts for its ability to form complex molecules. a. I can describe how carbon skeletons may vary and explain how this variation contributes to the diversity and complexity of organic molecules. b. I can describe the basic structure of a hydrocarbon and explain why these molecules are hydrophobic. 2. I can identify the different functional groups and outline the chemical properties of the organic molecules in which they occur. NOTEBOOK: ● Determine an independent variable that you want to test. ● Develop a hypothesis (remember this is an idea...it should be founded in how the variable you are testing should impact the rate of transpiration in your plants) ● Outline /Or use a flow chart that presents a procedure that will allow you to measure transpiration in your plants. ● Construct a table for taking Transpiration Lab Data. · Read chapter 4 · Video: Crash Course That’s why carbon is a tramp · Complete mastering biology chapter 4. Study for: Quiz on ch 1 - 4 Begin Writing Text for Mini Posters: Write Purpose, Background, Hypothesis/Prediction, Methods Be sure that you have a data table ready for recording data before you get to class on Monday. Mon., Aug. 26 Quiz on chapters 1-4 Take Data Organize Data into tables and graph(s) Finish Data 1. Determine how to use the laef mass data and the fact that there are 0.0189g/cm2 (average mass of 1 cm2 of these leaves.) 2. For each plant convert the grams of leaf per plant to surface area of leaf per plant by using the value given above 3. Convert your value of grams of water lost per plant to grams/cm2 of water lost per plant. 4. Use a google spreadsheet to work collaboratively with your lab group and generate the following: Raw data table, summary data table, graph. 5. Share the google doc with me this evening. Tues., Aug. 27 Write Results and Discussion for Mini Poster All parts will be collected Thursday. Each team should turn in one document. Use the Mini poster grading rubric, and mini poster template to guide you as you generate this document. Discuss How to Report Results Work in Groups to consolidate/ correct text. Statistical/Error Analysis of Data Video to watch: ● Molecules of Life ● Crash course Biological molecules: You are what you eat · Read chapter 5 Prezi Macromolecules · Mastering biology; chapter 5 Complete the Parts of Mini Poster Lab. due on Thursday Aug. 29 Wed., Aug, 28 Pattern Activity Chapter 5: 1) I can distinguish between monomers and polymers. a) I can explain the difference between condensation and hydrolysis reactions. 2) I can describe the monomers, structures and biological importance of the four classes of macromolecules. a) Carbohydrates: i) I can identify and describe the basic structure and functions of carbohydrates. ii) I can explain the nature of the bonding between carbohydrate subunits with respect to the secondary structure of the carbohydrate b) Lipids i) I can identify and describe the basic structure and functions of lipids. ii) I can relate the structure of a phospholipid to its function iii) I can relate the structure of a fatty acid to its function. iv) I can relate structures of steroids to their functions. c) Proteins i) I can identify and describe the basic structure and functions of proteins. ii) I can identify an amino acid. iii) I can explain how amino acids are grouped according the physical and chemical properties of their R groups. iv) I can describe the bonds of primary, secondary and tertiary protein structures. v) I can explain and identify all four levels of protein structure. vi) I can explain how pH, temperature, and salinity, affect protein structure and functions. d) Nucleic Acids i) I can identify the different components of a Focus Questions: To Be Handed in 1. How can you tell if an organic molecule is: a. carbohydrate b. lipid c. protein d. nucleic acid 2. What are the four different types of amino acids (Fig 5.16)? How do these impact the structure and function of the protein? 3. How do pH, salinity and very warm temperatures denature proteins? 4. What are four differences between RNA and DNA? nucleotide and differentiate between a DNA and RNA nucleotide. ii) I can identify the 5’ and 3’ ends of nucleic acids iii) I can describe the structure of DNA and RNA and relate their structures to their functions iv) I can identify and explain the different bonds found in DNA and RNA v) I can explain complementary base pairing rules. Thurs., Aug. 29 Finish Pattern Activity Review Organic Molecules Introduce Enzymes Toothpickase Video to watch: Enzymes · Read ch 8; Sections 8.4 – 8.5, enzyme material only! (pages 150 – 157) · Mastering biology: Enzymes Read Oxidation of Catechol lab. Understand the procedure for the blank and control group. ● ● Fri., Aug. 30 Enzyme Lab Control Mon., Sept. 2 Chapter 8 (152 – 160): 1. I can describe the structure and explain the significance and functions of enzymes in biological systems a. I can describe why an investment of activation energy is necessary to initiate a spontaneous reaction. b. I can explain how enzymes speed up chemical reactions. c. I can explain the interactions between substrates and active sites of enzymes. d. I can explain how the following affect enzymatic function: i. Enzyme and substrate concentrations ii. pH, temperature and salinity iii. coenzymes iv. inhibition; competitive, non-competitive and allosteric v. cooperativity e. I can describe the role that enzymes play in feedback inhibition Understand means that you understand why you are adding the specific materials and amounts to each of these test groups. Also it means that you can predict what will happen in each of these test groups. Design Enzyme Lab Share this document with me by 8am Sunday morning. This will give me time to provide feedback to your group so that I can let you know if the design needs any changes/adjustments. No School Tues, Sept. 3 Run Design Enzyme Lab Wed., Sept. 4 Continue/modify lab if necessary Share data with group Determine best way to f. I can design a lab that quantifiably measures the effect of an environmental factor on enzymatic activity Work together to prepare mini poster analyze data Thurs., Sept. 5 Fri., Sept. 6 Mon., Sept. 9 No School Work on mini poster Finish Data Sharing and poster preparation Finish Protein POGIL Answer questions on chapter 5 Finish your mini poster Study for chapter 5 quiz · Tues., Sept. 10 Chapter 5 quiz. Poster Sharing symposium Wed., Sept. 11 Thurs., Sept. 12 Enzyme POGIL Biochemistry Unit Exam Study for test Article summary is due