Advanced Placement Biology Syllabus 2012-2013 Instructor: Chris Carr Contact information: e-mail: mrcarrbio@gmail.com Personal Philosophy Welcome to AP Biology! I enjoy teaching biology because it helps us understand our world. A greater understanding of our world allows our students to make informed decisions regarding their personal health, the environment, and the interconnectedness between our actions and others. Course Description: AP Biology is a class designed for students who have completed Biology and Chemistry with grades of "B" or better and who are possibly contemplating a major in a science related field or planning to attend a 4 yr. college. Students earn college credit for the class by passing the AP Biology exam given on Monday, May 11, 2010. Students will have their choice of taking the 2009 AP Biology exam for possible college credit or a past AP Biology exam which will count as their final exam. Students who take the 2009 AP exam will be excused from taking the final exam. The class will be conducted at the college level and students are expected to work accordingly. Students should attend class regularly, except in the case of excused illness. Students will be expected to come to class prepared and on time. The overall success of the program depends in large part, on each student meeting their individual responsibilities. A significant portion of the content of this course will be covered independently by each student. Allowances should be made for substantial study time. Required Materials: 3-ring binder with pocketed dividers Standard size, loose leaf notebook paper Pencils with erasers Colored pencils Folder with 2 pockets for Lab Reports Graph paper Black ink pens Goals: 1.) To familiarize students with the terminology and concepts of Biology using a theme-oriented approach that emphasizes concepts and science as a process over knowledge of facts. 2.) To enhance problem-solving and critical thinking skills of students using hands-on labs, readings, collections, independent projects, and class discussions. 3.) To strengthen students’ communication and literacy skills through the use of written assignments, essays, abstracts, and lab reports. 4.) To prepare and encourage students to continue further study in the Biological Sciences. Text: Campbell and Reese, 2008. Biology, 8th Edition, Benjamin/Cummings Pubs. Co. Inc. Redwood City, CA. Major Themes of Advanced Placement Biology: Throughout the year we will be investigating the major themes of biology listed below. We will continuously search for new methods to utilize these themes to establish connections between one topic and another. Each of these major themes is connected and relevant to every topic in the course. •Science as a Process •Evolution •Energy Transfer •Continuity and Change •Relationship of Structure to Function •Regulation •Interdependence in Nature •Science, Technology and Society Topic Outline: Percentage Topic of Course I. Molecules and Cells . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25% A. Chemistry of Life . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .7% Water Organic molecules in organisms Free energy changes Enzymes B. Cells . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .10% Prokaryotic and eukaryotic cells Membranes Subcellular organization Cell cycle and its regulation C. Cellular Energetics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8% Coupled reactions Fermentation and cellular respiration Photosynthesis II. Heredity and Evolution . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 25% A. Heredity . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8% Meiosis and gametogenesis Eukaryotic chromosomes Inheritance patterns B. Molecular Genetics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9% RNA and DNA structure and function Gene regulation Mutation Viral structure and replication Nucleic acid technology and applications C. Evolutionary Biology . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8% Early evolution of life Evidence for evolution Mechanisms of evolution III. Organisms and Populations . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 50% A. Diversity of Organisms . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .8% Evolutionary patterns Survey of the diversity of life Phylogenetic classification Evolutionary relationships B. Structure and Function of Plants and Animals . . . . . . . . . . 32% Reproduction, growth, and development Structural, physiological, and behavioral adaptations Response to the environment C. Ecology . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10% Population dynamics Communities and ecosystems Global issues Explanation of the Major Themes The AP Biology Development Committee has identified eight major themes that recur throughout the course. As an AP Biology teacher I am emphasizing the pervasiveness of the themes to assist students in organizing concepts and topics into a coherent conceptual framework. I. Science as a Process—Science is a way of knowing. It can involve a discovery process using inductive reasoning, or it can be a process of hypothesis testing. Example: The theory of evolution was developed based on observation and experimentation. II. Evolution—Evolution is the biological change of organisms that occurs over time and is driven by the process of natural selection. Evolution accounts for the diversity of life on Earth. Example: Widespread use of antibiotics has selected for antibiotic resistance in disease-causing bacteria. III. Energy Transfer—Energy is the capacity to do work. All living organisms are active (living) because of their abilities to link energy reactions to the biochemical reactions that take place within their cells. Example: The energy of sunlight, along with carbon dioxide and water, allows plant cells to make organic materials, synthesize chemical energy molecules, and ultimately release oxygen to the environment. IV. Continuity and Change—All species tend to maintain themselves from generation to generation using the same genetic code. However, there are genetic mechanisms that lead to change over time, or evolution. Example: Mitosis consistently replicates cells in an organism; meiosis (and hence sexual reproduction) results in genetic variability. V. Relationship of Structure to Function—The structural levels from molecules to organisms ensure successful functioning in all living organisms and living systems. Example: Aerodynamics of a bird’s wing permits flight. VI. Regulation—Everything from cells to organisms to ecosystems is in a state of dynamic balance that must be controlled by positive or negative feedback mechanisms. Example: Body temperature is regulated by the brain via feedback mechanisms. VII. Interdependence in Nature—Living organisms rarely exist alone in nature. Example: Microscopic organisms can live in a symbiotic relationship in the intestinal tract of another organism; the host provides shelter and nutrients, and the microorganisms digest the food. VIII. Science, Technology, and Society—Scientific research often leads to technological advances that can have positive and/or negative impacts upon society as a whole. Example: Biotechnology has allowed the development of genetically modified plants. Laboratory: I plan to cover all of the labs in the AP Biology Lab Manual for Students, either exactly or modified to fulfill my course objectives. These labs will be completed either electronically using online resources or through actual use of course equipment. Class Notebook: All students should maintain an orderly notebook (please obtain a large 3-ringed binder) organized as you wish. Lecture notes, handouts and study guide assignments should be included. Exams: Exams will be given according to the AP Biology exam format (60% objective, 40% essay). Exams will be given approximately every three weeks. Grading: Grades will be awarded according to the following format: 100% - 90% = A, 89% - 80%= B, 79% - 70% = C, 69% - 59% = D, 58% and below F. All students are expected to maintain a grade of at least " C" at all times during the year. Any student earning a score of 4 or 5 on the AP Biology exam and receiving a passing grade in the class, will have both semester grades raised one full mark ( ie. if a student earns a B for both semesters and earns a 4 on the AP Biology exam, both semester grades would be changed to A). Student Evaluation and Assessment: I will use quizzes, homework, unit tests, major projects, lab reports, and research papers to evaluate and assess my students’ learning. Online Resources: College Board AP Biology: http://www.collegeboard.com/student/testing/ap/sub_bio.html PHS-The Biology Place: http://www.phschool.com/science/biology_place/ Learn Genetics: http://learn.genetics.utah.edu Curriculum Map 2009-2010 August/September October November December A. Chemistry of Life 7% Water Organic molecules in organisms Free energy changes Enzymes B.Cells10% Prokaryotic and eukaryotic cells Membranes Subcellular organization Cell cycle and its regulation C. Cellular Energetics 8% Coupled reactions Fermentation and cellular respiration Photosynthesis II. Heredity and Evolution 25% A. Heredity 8% Meiosis and gametogenesis Eukaryotic chromosomes Inheritance patterns Exam I. January B. Molecular Genetics 9% RNA and DNA structure and function Gene regulation Mutation Viral structure and replication Nucleic acid technology and applications Exam II. February C. Evolutionary Biology 8% Early evolution of life Evidence for evolution Mechanisms of evolution Exam III. March/April III. Organisms and Populations 50% A. Diversity of Organisms 8% Evolutionary patterns Survey of the diversity of life Phylogenetic classification Evolutionary relationships Exam IV. May C. Ecology 10% Population dynamics Communities and ecosystems Global issues Aquatic Ecology and Forestry B. Structure and Function of Plants and Animals 32% Reproduction, growth, and development Structural, physiological, and behavioral adaptations Response to the environment Exam V. Exam VI. Exam VIII. Final or AP Test Year Calendar of Topics and Activities August *Is it Alive? *Goal Setting *Scientific Process *Writing a Free Response (FR) Essay *Atoms *Ionic Molecules *Covalent Molecules *Hydrogen Bonding *Lab Comparing Bond Properties Watch videos on elements, bonding and molecular interactions. September *Making Solutions *Review of pH *Quiz *Structural Rearrangements *Functional Groups *Energy *Enzymes *FR *AP Lab #2 Enzymes Watch videos on enzymes and energy changes in a chemical reaction. Review: *Organic Molecules *Organic Molecules * FR *Test on Review Topics Watch videos on the molecules of life. Cell Components: *Intro to Cells *Review of Microscope Technique *FR *Model Building, Prokaryotic Cells *Grade an FR *Eukaryotic Cells *Endomembrane System *Cell Mobility *Review of Cell Parts *AP Lab #1 Diffusion and Osmosis Watch videos on prokaryotic and October Cellular Energy: *Glycolysis *Krebs Cycle *Electron Transport System *Efficiency *FR *Cell Respiration Simulation *Fermentation *AP Lab #5 Cell Respiration Watch videos on cell respiration. Photosynthesis: *Leaf Structure *AP Lab #4A Plant Pigments *Light Capture *Light Reactions *Dark Reactions Photorespiration *CAM Photosynthesis *FR *AP Lab #4B Photosynthesis Watch videos on photosynthesis. Cell Communication and Mitosis: *Test on Cell Respiration and Photosynthesis *Cell Signals Reception *Cell Signal Analogies *Share Cell Signal Analogies *FR *Mitosis Models *AP Lab #3A Mitosis *Cancer *FR Watch videos on November/December January AP Lab #8 Inheritance: *Gene Expression *Genetic Problems *Fruit Flies *Pedigrees and Inheritance Patterns *Fruit Flies *Gene Linkage *Sex Linkage *Fruit Flies *Karyotyping *Fruit Flies *FR *Chi-Squared *Poster Presentations *Extra time to catch up if needed Watch videos on Mendelian genetics. Gene Expression: Veteran’s Day *Protein and DNA *Model DNA *Replication *FR in class *Transcription and Translation *FR *Making Proteins *Review Game Watch videos on transcription and translation. Viruses/Bacteria And Eukaryotic Genome: *Test - Genetics Part A *Viruses *Begin Poster Presentations *Operons *Gene Control *Bacterial Life Cycles *AP Lab #6A Transformation Population Genetics: Watch videos on the formation and changes of the planet. Review of Evolution: *Evolution Review Game Show *Evolution Review Game Show *Evolution Review Game Show *Evolution Review Game Show *Mammal Taxonomy Project Watch videos on evolutionary change on earth. Taxonomy: *Phylogenetic Hypotheses *Protein and DNA Data Bases *Prokaryotic Evolution *FR *Protists *My Favorite Protist Presentations *Multicellular Development *Phylogeny Mobiles Watch videos on protists. eukaryotic cells. Membrane Transport: *Finish Lab #1 *Fluid Mosaic Model *FR *Active Transport Simulation *Review for Test *Test - Cell Parts and Membrane Traffic *Step-wise Energy Use *Redox reactions *Practice a timed FR Watch videos on cell membrane transport. cellular communication. Meiosis and Intro to Genetics: *AP Lab #3B & C - Meiosis *Haploid/Diploid Life Cycles *Group FR *Test on Cell Signals and Cell Division *Mendel’s Laws *Monohybrid Crosses *AP Lab #7 Fruit Flies Watch videos on mitosis and meiosis *FR Watch videos on viral and bacterial life cycles. *Cancer *Poster Presentations Early Cellular Evolution: *Invertebrates *Dissection of Invertebrates *Comparative Evolution *FR *Dissection of Vertebrates *Comparative Evolution *Phylogeny Team Scramble Watch videos on invertebrates. Evolution of Animals: *Test Evolution *Tissue Identification Lab *FR *Nerve Conduction *CNS Stimulation Exercises Watch videos on the nervous system. February Nervous System: *Sensory Perception *Muscle Contraction Models *FR *Sensory Organ Presentations *Sensory Organ Presentations *Guest Speaker Neurologist or Neurosurgeon *FR Watch videos on the endocrine system. Homeostasis and Endocrine System: *Water Balance and Nitrogenous Wastes *FR *Begin Food Journal *Tracking Endocrine Signals *Analysis of a FR *Dissection to Compare Homeostatic and Nervous System *Guest Speaker Endocrinologist Watch videos on the endocrine system and homeostasis. Digestion and Gas Exchange: *Intro to Digestion *Begin Digestion Self-study *Lab on Digestive Enzymes *FR *Lab on Respiration Rates and Temperature *AP Lab #10 Circulation Watch videos on digestion and gas March Immune System: *First and Second Lines of Defense *Rehearsal of Third Line of Defense Play *Performance of Third Line of Defense Play *Pig dissection review of anatomy *Review of Anatomy and Physiology Watch videos on the immune system. Fungi and Plant Origins: *Test - Anatomy and Physiology *Fungi Presentations *Fungi Presentations *Begin Plant Scavenger Hunt *Plant Scavenger Hunt Due *Major Division Dissections *Begin Plant Visual Dictionary Watch videos on fungi and early plants. Spring Break Plant Structures: *Roots, Stems and Leaves *Secondary Growth Circles for HW *Plant Tissues and Cellular Growth *AP Lab #9B Structure of the Stem *Transport in Plants *Review of Water Potential *AP Lab #1E - April Plant Nutrition: *Soil Chemistry *Root Symbionts *FR *Plant Stress Factors Lab *Flower Dissections *Fruit Dissections *Seed Displays for HW *Mounted Seed Displays Due *Plant Hormones Labs Watch videos on plant nutrition. Plant Hormones: *Inclass FR *Plant Visual Dictionary Due *Test on Fungi and Plants *Planetary Motion *Global Climate *Begin Biome Dioramas *Population Dynamics Game *Human Population Growth Calculations Watch videos on plant hormones and responses to light. Ecology: *Distribution of Life on Earth *FR *Biodiversity *Succession *Species Interactions Scavenger Hunt *Energy Flow in Ecosystems *Food Webs *AP Lab #12 Dissolved Oxygen Watch videos on ecological principles. Ecology: *Nutrient Cycles *FR *AP Lab #11 - May/June Review: * Review for AP Exam * Review for AP Exam * Review for AP Exam * Review for AP Exam * Review for AP Exam Exam Week Special Topics exchange, or watch Lorenzo’s Oil to discuss the scientific process. Reproduction and Development: *Mating Strategies Game *FR *Frog Dissection Digestion, Circulation and Reproductive Organs STDs *Lab - Sea Urchin Fertilization and Development *FR *Begin preparation for Third Line of Defense Play Watch videos on reproduction and growth Onion Cell Plasmolysis Habitat Selection *Test on Ecology *Review for AP Exam *Review for AP Exam Watch videos on human population growth and nutrient cycles.