Chapter 4 Extensions and Modifications of Basic Principles Multiple Choice 1. In humans, male gender is determined by: a. the X chromosome. b. the Y chromosome. *c. the SRY gene on the Y chromosome.** d. the SRY gene on the X chromosome. e. the number of copies of the SRY gene on the Y chromosome. 2. In humans, extra copies of the sex chromosomes (either X or Y) can cause which of the following? a. underdeveloped sex organs b. mental retardation c. sterility d. reduced facial hair *e. any of the above 3. A guinea pig breeder is trying to select for unusual coat color variations that might be especially appealing to clients. She has discovered that chocolate brown guinea pigs are the most popular, so she has repeatedly crossed her chocolate brown male with a female of the same phenotype. The litters are always smaller than usual, and she gets a 2:1 ratio of brown to blonde offspring. What might be happening? a. The homozygote for the recessive allele is a lethal combination, so those offspring do not survive. *b. The homozygote for the dominant allele is a lethal combination, so those offspring do not survive. c. She is probably getting a 3:1 ratio and at least one of the three is the homozygote for the brown allele. d. There is incomplete dominance causing a lethal phenotype. 4. This same guinea pig breeder has female guinea pigs with the same coloration as tortoiseshell cats. Assuming the same genetic mechanism is causing this phenotype in both the cats the guinea pigs, what is the reason for this color variation? *a. The trait is X-linked. Because of dosage compensation and the random inactivation of one of the X-chromosomes, each cell produces the pigment determined by the active X-chromosome. b. The trait causing uniform hair color is Y-linked. Because the animal is female, there is no Y chromosome to act on the other genes. Extensions and Modifications of Basic Principles c. The trait is not sex-linked, but is recessive and epistatic, so it occurs more frequently than a true Mendelian recessive phenotype. d. The trait is hemizygous. 5. Drosophila spp. are commonly used for genetic research, as well as other scientific research. These flies are an ideal organism with which to work because: a. they have a short generation time. b. they produce a lot of offspring during their lifetime. c. they are easy to maintain in the lab. d. they have a small genome with large chromosomes. * e. all of the above. 6. In many—but not all—organisms, sex is determined by the chromosomes that the offspring carries (chromosomal sex determining systems). Typically, one gender has two copies of the same chromosome, while the other has only one sex chromosome or one copy each of two different sex chromosomes. The one that produces two different gametes with regard to the sex chromosomes is called: a. the homogametic sex. *b. the heterogametic sex. c. the hemizygote. d. the genic sex. e. None of the above are accurate. 7. How do sex chromosomes pair and segregate during meiosis? a. Sex chromosomes can pair because of the SRY gene. b. Sex chromosomes don’t pair during meiosis; it is random separation. *c. Sex chromosomes pair at pseudoautosomal regions.** d. Sex chromosomes pair at autosomal regions. 8. What do genic sex determination and chromosomal sex determination have in common? a. They rely on environmental factors, as seen in reptiles. *b. Sex is determined by genes. c. The male and females have different phenotypes. d. Sex is determined by the SRY gene. 9. Dosage compensation is an important biological phenomenon accomplished a number of ways. The purpose of each of these mechanisms is to: Chapter 4 a. lengthen the time that X-linked genes are producing protein. b. reduce the amount of protein that X-linked genes produce. c. make sure that Y-linked genes produce enough protein to balance the X-linked genes. *d. equalize the amount of protein produced by X-linked genes in the two sexes. 10. Which of these statements is true? a. Any genetic characteristic with different phenotypes in males and females must be sex linked. b. All different phenotypes for a characteristic between males and females are due to the interaction of sex hormones on autosomal genes. c. Any characteristic observed more frequently in one gender over the other must be sex linked. *d. Traits observed more commonly in one sex than the other are likely to be sex influenced. 11. John was diagnosed with a medical condition, and his doctor told him it was hereditary. When John talked to his mother about it, she said her father had the same condition, as did other males in her family. She didn’t know of anyone in her husband’s family who had ever been diagnosed with this condition. Based on this information, John reasoned that this condition was: a. X-linked, dominant, and inherited from his paternal ancestors. b. X-linked, dominant, and inherited from his maternal ancestors. * c. X-linked, recessive, and inherited from his maternal ancestors. d. X-linked, recessive, and inherited from his paternal ancestors. e. Y-linked, recessive, and inherited from his maternal ancestors. 12. Which of these are not characteristics of dominance? a. It is a result of interactions between genes and the same locus. b. It is an allelic interaction. c. It influences only how genes are expressed, not how they are inherited. d. It varies depending on the scale on which the phenotype is being examined. *e. It is the same no matter how we consider the phenotype. 13. Human polydactyly (having extra fingers and toes) is caused by a dominant allele. But not every person with the genotype has the corresponding phenotype. The percentage of people who do have the phenotype corresponding to the genotype is referred to as: *a. pentrance. b. expressivity. c. incomplete dominance. d. hemizygote ratio. e. none of the above. Extensions and Modifications of Basic Principles 14. Why aren’t there more conditions that have dominant lethal alleles circulating in the population? a. There is no such thing as a dominant lethal allele; only recessive genes can have lethal phenotypes. b. Only for traits with multiple alleles can there be dominant lethal alleles. *c. In order for dominant lethal conditions to be passed on, the afflicted person has to reproduce before they die. Thus, only those conditions with onset later in life can be passed to the next generation. d. The time of onset for lethal dominant gene expression is unrelated to it being passed to the next generation. 15. Genes can be known to interact with one another. When the effect of one gene hides the effect of another, this is known as: *a. epistasis. b. codominance. c. incomplete dominance. d. gene interacton. e.penetrance. f. expressivity. 16. Red-green color blindness is X-linked recessive. A woman with normal color vision has a father who is color blind. The woman has a child with a man with normal color vision. Which phenotype is NOT expected? *a. a color-blind female b. a color-blind male c. a noncolor-blind female d. a noncolor-blind male 17. A Barr body is a(n): a. active X chromosome. *b. inactive X chromosome. c. active Y chromosome. d. inactive Y chromosome. 18. In Turner syndrome (45, X), how many Barr bodies would one expect to see and what would be the sex of the specific individuals? a. Zero and male, respectively b. One and male, respectively *c. None and female, respectively d. One and female, respectively e. Two and female, respectively 19. Klinefelter syndrome in humans, which leads to underdeveloped testes and reduced fertility to sterility, is caused by which chromosomal condition? How many Barr bodies will be present? Chapter 4 a. 47, XYY; none *b. 47, XXY; one c. 48, XXXY; two d. 47, XXX ; two e. 45, X; none 20. In the experiment in which transgenic mice were used to identify the male determining region of the Y chromosome: a. an egg was fertilized by a sperm carrying only the Y chromosome. b. restriction enzymes were used to detect the Sry region of the chromosome. *c. DNA containing only the mouse Sry region was injected into normal XX mouse eggs and most of the offspring develop into males. d. X chromosomes were injected into an egg. e. X and Y chromosomes were injected into the egg of a female mouse. 21. In a germ-line cell from a human male that is dividing, when do the X and Y chromosomes segregate? a. during mitosis *b. during meiosis I, anaphase c. during meiosis II, anaphase d. They do not segregate; gametes contain a copy of X and a copy of Y. 22-23. Interactions among the human ABO blood group alleles involve _______ and ________. *a. co-dominance b. incomplete dominance *c. complete dominance d. epistasis e. continuous variation 24. The individual from which this cell came is a: *a. male. b. female. c. hermaphrodite. d. monoecious. 25. A cell from this individual begins to go through meiosis. When the cell reaches meiosis II, it becomes two cells. Which of the following is a possible combination of chromosomes in one of the two cells when it goes through metaphase of meiosis II? a. one chromosome with A allele, one with B allele, and two X chromosomes b. one chromosome with A allele, one with a allele, one with B allele, one with b allele, and two X chromosomes c. a pair of sister chromatids with A allele, a pair of sister chromatids with B allele d. a pair of sister chromatids with a allele, a pair of sister chromatids with B allele, a pair of sister chromatids X Extensions and Modifications of Basic Principles *e. C and D are both possible. 26. What is the probability of a gamete from this individual that has the following genotype: alleles A and b, chromosome X? a. 1/2 b. 1/4 c. 1/6 *d. 1/8 27. Which of the following human genotypes is associated with Klinefelter syndrome? a. XXY b. XXYY c. XXXY *d. all of the above e. none of the above 28. A Barr body is a(n): a. gene on the X chromosome that is responsible for female development. b. patch of cells that has a phenotype different from surrounding cells because of variable X inactivation. *c. inactivated X chromosome, visible in the nucleus of a cell that is from a female mammal. d. extra X chromosome in a cell that is the result of nondisjunction. e. extra Y chromosome in a cell that is the result of nondisjunction. 29. If a male bird that is heterozygous for a recessive Z-linked mutation is crossed to a wild type female, what proportion of the progeny will be mutant males? *a. 0% b. 100% c. 75% d. 50% e. 25% True/False 1. In humans, SRY is the male determining gene. (ANS: T) 2. Cytoplasmic inheritance is identical to the genetic maternal effect. (ANS: F) 3. Inactivation of the X-chromosomes is not performed on a random basis. (ANS: F) 4. The condition XXXY is always lethal in humans. (ANS: F) Chapter 4 5. The condition of having no X chromosomes, for example YO, is lethal in humans. (ANS: T) 6. All human ABO blood group alleles are co-dominant. (ANS: F) 7. Epistatic genes must be dominant. (ANS: F) 8. A female with androgen insensitivity may have XY sex chromosomes rather than XX. (ANS: T) 9. Genomic imprinting refers to the differential expression of genetic material depending on the sex of the parent that it (the genetic material) originated from. (ANS: T) 10. The X and Y chromosomes contain a similar number of genes and genetic material. (ANS: F) Fill in the Blank 1. The sex determination system used by Drosophila is called the ___________ system. ANS: genic balance 2. Male mammals inherit an X chromosome from ___________. ANS: the maternal parent; the mother 3. An allele causing death at an early stage of development is called a ___________. ANS: lethal allele 4. Human females with XY chromosomes and a mutation in their ___________receptor gene have ___________syndrome. ANS: androgen; androgen-insensitivity 5. Inheritance related to genes located in the cytoplasm is called ___________ inheritance. ANS: cytoplasmic 6. Human males with XY chromosomes are ___________ and produce two different kinds of gametes, while females with XX chromosomes are ___________ and produce only one kind. ANS: heterogametic; homogametic Short Answer Discussion Extensions and Modifications of Basic Principles 1. List three dosage compensation strategies for equalizing the amount of sex chromosome gene products. ANS: (1) Inactivation of one sex chromosome in the homogametic sex (2) Halving the activity of genes on both sex chromosomes in the homogametic sex (3) Increasing the activity of genes on the sex chromosome in the heterogametic sex 2. List six different sex determination systems and a representative organism for each. ANS: (1) XX-XO (2) XX-XY (3) ZZ-ZW (4) Haplodiploidy (5) Genic balance (6) Environmental grasshoppers humans birds bees Drosophila mollusks; many turtles, crocodiles, and alligators 3. Explain the differences between incomplete dominance and continuous variation. ANS: (1) In incomplete dominance, the phenotype of a heterozygote is intermediate in appearance between the phenotypes of the two homozygotes. Incomplete dominance involves a single gene locus. (2) Continuous variation refers to phenotypic variation exhibited by quantitative traits that are overlapping and distributed from one extreme to another. The continuous variation of quantitative traits is usually controlled by several genes whose alleles have an additive effect on the phenotype. Use the following information for questions 4-5. In humans, the presence of the SRY gene, normally on Y, determines maleness. In Drosophila, an X: A (autosome) ratio of 0.5 determines maleness. 4. Explain the genders of human and Drosophila XXY individuals. ANS: An XXY human is male. The SRY on the Y chromosome determines maleness, in spite of the two X chromosomes. An XXY Drosophila is female. Drosophila is diploid, so there are two of each autosome. If there are two X chromosomes, the X:A ratio is 1.0, which is a female. 5. Explain the genders of human and Drosophila XO individuals. Chapter 4 ANS: An XO human is female. In the absence of SRY from a Y chromosome, the person will develop as a female, in spite of having only one X chromosome. An XO Drosophila is male. Drosophila is diploid, so there are two of each autosome. If there is a single X chromosome, the X:A ratio is ½, or 0.5, which is a male. 6. Discuss the difference between “cytoplasmic inheritance” and “genetic maternal effect.” ANS: (1) In cytoplasmic inheritance, the genes controlling a given trait are inherited exclusively from the mother (through cytoplasmic organelles such as mitochondria) and can be expressed in both male and female progeny. (2) In the genetic maternal effect, the factors controlling a given trait are also inherited exclusively from the mother and likewise can be expressed in both male and female progeny, but these factors are not genes. Rather, the offspring’s phenotype is determined by mRNA or protein factors in the oocyte. So while genes related to the trait are inherited from both parents (not so for the cytoplasmic inheritance), in a given generation, phenotype is determined exclusively by the mother’s, not the offspring’s, genotype. 7. How does epistasis differ from Mendel’s principle of dominance? ANS: Phenotypic expression is often the result of products produced by multi-step metabolic pathways involving several different genes; each gene encodes an enzyme that regulates a specific biochemical step or event. Epistasis refers to the interaction among two or more genes that control a common pathway. For example, a mutation in any single gene contributing to a metabolic pathway can affect the expression of other genes in the pathway, and, of course, the final phenotype, depending on which biochemical step that gene controls. Epistasis thus involves interaction among alleles located at different gene loci (i.e., inter-locus, allele interaction). This is in contrast to dominance, which involves interaction between alleles located at the same gene locus (i.e., intralocus, allele interaction). Use the following information for questions 8–9. The following diagram shows two pairs of autosomes and a pair of sex chromosomes from a dioecious mammal. Extensions and Modifications of Basic Principles -a B -- -b A 8. Draw the chromosomes as they would appear in separate cells at the end of meiosis I, after a crossover between locus A and the centromere. Indicate alleles A, a, B, and b. ANS: A After meiosis I (Note: Independent assortment could yield other combination of parental chromosomes.) B a B A ab b 9. Which of Mendel’s principles is demonstrated by alleles B and b in your drawing? (Be more specific than “first principle” or “second principle.”) ANS: Principle of segregation. (Alleles of a gene separate in meiosis. Or, homologous chromosomes segregate in meiosis.) 10. Some organisms have more multiple X and Y chromosome and even different numbers of X and Y chromosomes. You have discovered such a species. Females have 8 X chromosomes while males have 4 X and 2 Y. Describe the X and Y constitution of the gametes produced by this species—both male and female—that allows these chromosome numbers to be stably maintained. ANS: Females must produce one type of gamete, with 4 X chromosomes, while males produce two types of gametes, with 4 X chromosomes or with 2 Y chromosomes. Fertilization using a 4 X male gamete produces an 8 X female, while fertilization with a 2 Y gamete produces a male. Use the following information for questions 11–12. A man and a woman are trying to have children but are unsuccessful. As part of a series of tests, the man is karyotyped. His autosomes appear normal, but his sex chromosomes, shown in the following diagram, are not. The diagram also shows a normal male’s sex chromosomes for reference. Chapter 4 man's sex chromosomes normal X and Y 11. In two to three sentences, explain the man’s situation, including the type of chromosome mutation he carries; the specific regions of specific chromosomes involved; and why he is male. ANS: He has an X with a translocation, meaning part of one chromosome has been moved to another. The translocated part is from Y and carries SRY, which determines maleness. He is missing the rest of Y, including the genes required for male fertility. 12. Can you tell if the mutation came from the man's mother or the man's father? Explain how you can tell. ANS: He inherited the translocation chromosome from his father because his mother could not have carried the SRY-containing chromosome. Use the following information for questions 13–16. Red-green color blindness is X-linked recessive. A woman with normal color vision has a father who is red-green color blind. The woman has four sons, none of whom are color blind. In this family there are no instances of chromosome loss or gain such as occurs due to nondisjunction in meiosis. Each of the next three questions has an explanation for why none of the sons is color blind. For each, state if color blindness is possible or not possible, then give the reason for your choice. 13. Explanation 1: None of the sons is color blind because…the mother does not carry the color-blindness allele. ANS: Not possible. If there are no aneuploidies, the mother must have inherited the X with the recessive color-blindness allele from her father. 14. Explanation 2: None of the sons is color blind because…none of them inherited the color-blindness allele from the mother. Extensions and Modifications of Basic Principles ANS: Possible. She is heterozygous, so each son has a 50% chance of inheriting the X chromosome with the dominant allele for normal color vision. 15. Explanation 3: None of the sons is color blind because…the mother inactivated the X chromosome with the recessive color-blindness allele, and that is the one each son inherited. ANS: Not possible. X inactivation is reversed when an X chromosome is passed to offspring. 16. You are trying to develop a new species of newt as an experimental model system. You know that in other species of newt, green (G) is dominant to brown (g) skin color and is determined by a sex-linked gene. You cross brown males to green females and see that in the F1 all the males are green and all the females are brown. Which is the heterogametic sex in your species of newt? ANS: Because the F1 females have the recessive brown phenotype they must be hemizygous (i.e., they inherited a brown allele from their father and no allele from their mother). Therefore, the females of this species are the heterogametic sex. We use the ZZ-ZW nomenclature for species with heterogametic females. Therefore, your F1 females and males are ZgW and ZGZg, respectively. 17. While doing summer field work on a remote Indonesian island, you discover a new genus of lizard closely related to Komodo dragons. You attempt to discover what sex determination system it uses by performing a series of controlled crosses on the island, using an isolated pair of lizards. Initially, all your crosses yield only males (in significant numbers). As fall begins and you prepare to leave the island, you find that your last cross yielded only females (in significant numbers). Suggest a mode of sex determination that explains this data. ANS: The crosses yielded all males or all females from the same parents. Male and female progeny were correlated with climatic conditions (summer versus fall). Environmental sex determination that is dependent on temperature is a likely explanation. Use the following information for questions 18–19. Red-green colorblindness is an X-linked recessive condition. Juliet has a bit of difficulty passing the red-green color distinction test when she tries to get her driver's license. She has two children with a man who is not color blind. Neither Juliet's son (Henry) nor daughter (Roxanne) is color blind. Henry and Roxanne have normal karyotypes. Roxanne has a son who is color blind. 18. What is Juliet's genotype for the color-blindness allele? How would you explain her partial color blindness? Chapter 4 ANS: Juliet is heterozygous, so every diploid cell in her eyes contains both X chromosomes, one with the defective red-green color vision allele, and one with the normal color vision allele. She is not completely color blind because some of her cells are inactivating the X chromosome with the recessive, defective redgreen color vision allele and expressing the normal color vision allele, allowing her to see color. She has some difficulty with color vision because some of her cells are inactivating the X with the normal red-green color vision allele and expressing the red-green color-blind phenotype. Her eyes are actually a mosaic of cells with two different phenotypes. 19. Why aren't Henry and Roxanne color blind? ANS: Henry is not color blind because he inherited the X with the normal redgreen color vision allele from Juliet. Roxanne is not color blind because she is heterozygous like her mother, and does not have appreciable mosaicism for Xinactivation in her eye tissues. 20. List some examples of environmental factors affecting gene expression. ANS: (1) Temperature: Temperature-sensitive alleles like the Himalayan allele which is functional only at certain temperatures. (2) Specific foods or drugs: Glucose-6-phosphate dehydrogenase enzyme’s function. (3) Chemicals: The autosomal recessive mutation eyeless which will produce the eyeless phenotype after exposing the larvae of normal flies to sodium metaborate. 21. You cross a female rat with pink toe pads (T) and pointy ears (Xe) to a male rat with black toe pads (t) and round ears (XE). The t and e alleles are both recessive, and the ear-shaped gene is X-linked while the toe pad color gene is autosomal. The F1 progeny all have pink toe pads. What is the genotype of parental generation? What is the genotype of the F1 progeny? If the F1 are crossed to produce F2 progeny, what proportion of the F2 will be black-padded, pointy-eared males? ANS: The parental generation was T/T; Xe/Xe and t/t; XE/Y. The F1 were T/t; XEXe and T/t;XeY. Black-padded, pointy-eared males are tt and Xe/Xe. ¼ of the F2 progeny will be t/t, ¼ will be XeY. Therefore, 1/16 of the progeny will be blackpadded, pointy-eared males. Extended Answer Discussion Extensions and Modifications of Basic Principles 1. Listed below are blood types for several children and their mothers. Give all possible genotypes and blood types for the father of each child. Child’s blood type a. A b. O c. AB d. B Mother’s blood type A B A AB ANS: a. Child is either iAiA or iOiA. If iAiA, then the mother contributed an iA allele and the father contributed an iA allele; the father could be type A (iAiA or iOiA) or type AB (iAiB). If the child is iAiO, then the mother contributed an iA allele or an iO allele. In the former case the father would have contributed an iO allele, and thus can be either type A (iAiO) or type B (iBiO) or type O (iOiO); in the latter case, the father would have contributed an iA allele, and thus can be either type A (iAiA or iOiA) or type AB (iAiB). b. Child must be iOiO (because the iO allele is recessive to both iA and iB alleles) and receive the iO allele from each parent. Therefore, the mother must be iO iB. The father, who contributed an iO allele, could be either type A (iOiA), type B (iOiB), or type O (iOiO). c. Child must be iAiB. The mother contributed the iA allele. The father, who contributed an iB allele, may be either type AB (iAiB) or type B (iOiB or iBiB). d. Child is either iBiB or iOiB. The mother did not contribute the iA allele so she must have contributed an iB allele. The father could have contributed either an iB or an iO allele. In the former case he may be either type B (iBiB or iOiB) or type AB (iAiB); in the latter case he may be either type A (iAiO), type B (iBiO), or type O (iOiO). Matching Match numbers with the most appropriate letter choice 1. Pleiotropism (ANS: g) 2. Complementation test (ANS: h) 3. Phenocopy (ANS: a) 4. Incomplete dominance (ANS: e) 5. Cytoplasmic inheritance (ANS: d) 6. Conditional mutation (ANS: b) 7. Sex-influenced trait (ANS: i) 8. Genetic maternal effect (ANS: j) 9. Co-dominant (ANS: f) a. Environmentally produced phenotype b. Temperature-sensitive c. Polygenes and environment d. Non-nuclear e. Intermediate phenotype f. Discrete and equal g. Unrelated effects h. Homozygous mutations i. Variable expressivity j. Maternal genotype Chapter 4 10. Multi-factorial trait (ANS: c) Problems and Calculations 1. You are studying a coat color gene (B, brown) in Mexican bats. You have isolated a recessive allele (b) that causes yellow coat color, but you suspect that the phenotype may be sensitive to environmental conditions. To test the norm of reaction for temperature, you examine the segregation ratio of phenotypes in F1 progeny from a cross between two heterozygotes. You do this once at normal laboratory temperatures (28C) and once at temperatures closer to their native habitat (34C) and record the following data: Brown 28C 153 34C 170 Yellow 47 30 a. What ratio do you expect in each experiment? ANS: 3:1 b. What test can you use to determine if the ratio you observed is significantly different from the expected ratio? ANS: The chi-square test c. Using that statistical test, is either ratio more different that the expected ratio than one would expect from chance alone? If so, suggest a biological explanation. ANS: The chi-square test for the treatment at 34C yields a value of 2 = 10.67, indicating a significant difference from the expected ratio of 3:1. This suggests that elevated temperatures affect the penetrance of the yellow phenotype.