AP Biology Chapter 16 Notes Molecular Basis of Inheritance What you need to know… The structure of _________. The major steps of ____________________. The difference between __________________, ____________________, and ________________________. How DNA is packaged into a ____________________. Concept 16.1: DNA is the genetic material • Important Scientists – – Alfred Hershey and Martha Chase – Next Slides - ___________ is the genetic material – James Watson and Francis Crick – structure of DNA – Rosalind Franklin – next slides - produced a picture of the DNA molecule using ____________ crystallography; discovered DNA is a ____________ ____________ 3 Deductions by Watson and Crick • DNA = ___________________________ (twisted ladder). Sides are made up of sugar and phosphate backbones and rungs are made up of nitrogenous base pairs. • Nitrogenous bases are _________________ (A), _________________ (T), _______________ (G), and ____________________ (C). • Strands are _______________________ – left side runs 5’-3’ while opposite strand runs 3’-5’. Concept 16.2: Many proteins work together in DNA replication and repair Since the two strands of DNA are ______________________, each strand acts as a template for building a new strand in replication In DNA ____________________, the parent molecule unwinds, and two new daughter strands are built based on base-pairing rules It is considered ______________________ replication _______________________ – making of DNA from existing DNA strands o begins at special sites called ________________________________, where the two DNA strands are separated, opening up a replication “bubble” o Replication Bubble formed by ________________ that unwinds the DNA. Replication continues in both directions along strand until copied. o DNA ______________________ add nucleotides to strand at replication fork. o DNA Polymerase works in a 5’-3’ direction (_________________ strand) matching bases. o _____________________ strand (3’-5’) is copied in series of segments. o Lagging strand segment pieces are called __________________ fragments – tied together with DNA ______________. o The initial nucleotide strand is a short RNA ______________ An enzyme called _________________ can start an RNA chain from scratch and adds RNA nucleotides one at a time using the parental DNA as a template The primer is short (5–10 nucleotides long), and the 3 end serves as the starting point for the new DNA strand o Label the Picture: Replication of Leading Strand o Replication of the Lagging Strand o DNA polymerase must work in the direction _________ from the replication fork o The lagging strand is synthesized as a series of segments called __________________ fragments, which are joined together by DNA _____________ o See the Handout Replication of the Lagging Strand Proofreading and Repairing DNA o DNA ________________ proofread newly made DNA, replacing any incorrect nucleotides o In ________________ repair of DNA, repair enzymes correct errors in base pairing o DNA can be damaged by _____________, ______________ emissions, ____________, _______________, and certain molecules (in cigarette smoke for example) o In nucleotide excision repair, a ______________ cuts out and replaces damaged stretches of DNA Replicating the Ends of DNA Molecules o Limitations of DNA polymerase create problems for the linear DNA of eukaryotic chromosomes o The usual replication machinery provides no way to complete the 5 ends, so repeated rounds of replication produce ___________________ DNA molecules o Eukaryotic chromosomal DNA molecules have at their ends nucleotide sequences called ___________________ - do not prevent the shortening of DNA molecules, but they do postpone the erosion of genes near the ends of DNA molecules o An enzyme called ______________________ catalyzes the lengthening of telomeres in germ cells Concept 16.3 A chromosome consists of a DNA molecule packed together with proteins o The bacterial chromosome is a double-stranded, _____________________ DNA molecule associated with a small amount of protein o Eukaryotic chromosomes have _____________ DNA molecules associated with a large amount of protein o In a bacterium, the DNA is “supercoiled” and found in a region of the cell called the ________________ o ________________________ is a complex of DNA and protein, and is found in the nucleus of eukaryotic cells o _____________________ are proteins that are responsible for the first level of DNA packing in chromatin You should be able to: 1. Describe the contributions of the following people: Griffith; Avery, McCary, and MacLeod; Hershey and Chase; Chargaff; Watson and Crick; Franklin; Meselson and Stahl 2. Describe the structure of DNA 3. Describe the process of DNA replication; include the following terms: antiparallel structure, DNA polymerase, leading strand, lagging strand, Okazaki fragments, DNA ligase, primer, primase, helicase, topoisomerase, single-strand binding proteins 4. Describe the function of telomeres 5. Compare a bacterial chromosome and a eukaryotic chromosome